RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
BCCIP-202ENST00000299130 ABCC3O15438 1527 aa17.74■□□□□ 0.43
BCCIP-202ENST00000299130 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
BCCIP-202ENST00000299130 RGS3P49796 1198 aa17.72■□□□□ 0.43
BCCIP-202ENST00000299130 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
BCCIP-202ENST00000299130 IGHDP01880 384 aa17.71■□□□□ 0.43
BCCIP-202ENST00000299130 MTHFSP49914 203 aa17.7■□□□□ 0.42
BCCIP-202ENST00000299130 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
BCCIP-202ENST00000299130 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
BCCIP-202ENST00000299130 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
BCCIP-202ENST00000299130 CFAP74Q9C0B2 1584 aa17.7■□□□□ 0.42
BCCIP-202ENST00000299130 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 PANK1Q8TE04 598 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 GLI2P10070 1586 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 SLC4A3P48751 1232 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
BCCIP-202ENST00000299130 SAFB2Q14151 953 aaKnown RBP eCLIP17.68■□□□□ 0.42
BCCIP-202ENST00000299130 TULP4Q9NRJ4 1543 aa17.68■□□□□ 0.42
BCCIP-202ENST00000299130 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
BCCIP-202ENST00000299130 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
BCCIP-202ENST00000299130 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
BCCIP-202ENST00000299130 CABP2Q9NPB3 220 aa17.67■□□□□ 0.42
BCCIP-202ENST00000299130 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
BCCIP-202ENST00000299130 ARHGEF28Q8N1W1 1705 aaKnown RBP17.66■□□□□ 0.42
BCCIP-202ENST00000299130 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
BCCIP-202ENST00000299130 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
BCCIP-202ENST00000299130 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
BCCIP-202ENST00000299130 NEFMP07197 916 aa17.65■□□□□ 0.42
BCCIP-202ENST00000299130 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
BCCIP-202ENST00000299130 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
BCCIP-202ENST00000299130 IDI1Q13907 227 aa17.65■□□□□ 0.42
BCCIP-202ENST00000299130 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
BCCIP-202ENST00000299130 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
BCCIP-202ENST00000299130 DDRGK1Q96HY6 314 aa17.64■□□□□ 0.41
BCCIP-202ENST00000299130 EVC2Q86UK5 1308 aa17.64■□□□□ 0.41
BCCIP-202ENST00000299130 VGFO15240 615 aaPredicted RBP17.64■□□□□ 0.41
BCCIP-202ENST00000299130 CANXP27824 592 aaKnown RBP17.64■□□□□ 0.41
BCCIP-202ENST00000299130 RARSP54136 660 aaKnown RBP17.63■□□□□ 0.41
BCCIP-202ENST00000299130 STK26Q9P289 416 aa17.63■□□□□ 0.41
BCCIP-202ENST00000299130 DIP2CQ9Y2E4 1556 aa17.63■□□□□ 0.41
BCCIP-202ENST00000299130 BCL2L13Q9BXK5 485 aa17.63■□□□□ 0.41
BCCIP-202ENST00000299130 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
BCCIP-202ENST00000299130 RLBP1P12271 317 aa17.61■□□□□ 0.41
BCCIP-202ENST00000299130 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
BCCIP-202ENST00000299130 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
BCCIP-202ENST00000299130 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
BCCIP-202ENST00000299130 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
BCCIP-202ENST00000299130 WDR63Q8IWG1 891 aa17.59■□□□□ 0.41
BCCIP-202ENST00000299130 NEO1Q92859 1461 aa17.59■□□□□ 0.41
BCCIP-202ENST00000299130 YEATS2Q9ULM3 1422 aa17.59■□□□□ 0.41
BCCIP-202ENST00000299130 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.41
BCCIP-202ENST00000299130 PUS7Q96PZ0 661 aaKnown RBP17.58■□□□□ 0.41
BCCIP-202ENST00000299130 PPM1GO15355 546 aaPredicted RBP17.58■□□□□ 0.4
BCCIP-202ENST00000299130 A0A1W2PP64 1363 aa17.57■□□□□ 0.4
BCCIP-202ENST00000299130 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
BCCIP-202ENST00000299130 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
BCCIP-202ENST00000299130 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
BCCIP-202ENST00000299130 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
BCCIP-202ENST00000299130 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
BCCIP-202ENST00000299130 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
BCCIP-202ENST00000299130 NSD2O96028 1365 aa17.55■□□□□ 0.4
BCCIP-202ENST00000299130 SEC24BO95487 1268 aa17.55■□□□□ 0.4
BCCIP-202ENST00000299130 RICTORQ6R327 1708 aa17.55■□□□□ 0.4
BCCIP-202ENST00000299130 MINK1Q8N4C8 1332 aaPredicted RBP17.55■□□□□ 0.4
BCCIP-202ENST00000299130 USP35Q9P2H5 1018 aa17.54■□□□□ 0.4
BCCIP-202ENST00000299130 USP19O94966 1318 aa17.54■□□□□ 0.4
BCCIP-202ENST00000299130 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
BCCIP-202ENST00000299130 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
BCCIP-202ENST00000299130 FBXO31Q5XUX0 539 aaPredicted RBP17.53■□□□□ 0.4
BCCIP-202ENST00000299130 PTPRMP28827 1452 aa17.52■□□□□ 0.4
BCCIP-202ENST00000299130 ADGRB2O60241 1585 aa17.52■□□□□ 0.4
BCCIP-202ENST00000299130 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.4
BCCIP-202ENST00000299130 PRAM1Q96QH2 718 aa17.52■□□□□ 0.4
BCCIP-202ENST00000299130 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
BCCIP-202ENST00000299130 ZFYVE9O95405 1425 aa17.52■□□□□ 0.39
BCCIP-202ENST00000299130 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.39
BCCIP-202ENST00000299130 SLC52A1Q9NWF4 448 aa17.52■□□□□ 0.39
BCCIP-202ENST00000299130 NFKBIBQ15653 356 aa17.51■□□□□ 0.39
BCCIP-202ENST00000299130 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
BCCIP-202ENST00000299130 FYB1O15117 783 aa17.5■□□□□ 0.39
BCCIP-202ENST00000299130 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
BCCIP-202ENST00000299130 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
BCCIP-202ENST00000299130 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
BCCIP-202ENST00000299130 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
BCCIP-202ENST00000299130 COL3A1P02461 1466 aaPredicted RBP17.5■□□□□ 0.39
BCCIP-202ENST00000299130 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
BCCIP-202ENST00000299130 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
BCCIP-202ENST00000299130 MAPK8IP3Q9UPT6 1336 aa17.48■□□□□ 0.39
BCCIP-202ENST00000299130 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
BCCIP-202ENST00000299130 POGKQ9P215 609 aa17.48■□□□□ 0.39
BCCIP-202ENST00000299130 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
BCCIP-202ENST00000299130 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
BCCIP-202ENST00000299130 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
BCCIP-202ENST00000299130 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
BCCIP-202ENST00000299130 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
BCCIP-202ENST00000299130 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.38
BCCIP-202ENST00000299130 FBLN1P23142 703 aa17.45■□□□□ 0.38
BCCIP-202ENST00000299130 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms