RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
KDM1B-201ENST00000297792 NOS1P29475 1434 aa18.23■□□□□ 0.51
KDM1B-201ENST00000297792 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
KDM1B-201ENST00000297792 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
KDM1B-201ENST00000297792 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
KDM1B-201ENST00000297792 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
KDM1B-201ENST00000297792 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
KDM1B-201ENST00000297792 GGNBP2Q9H3C7 697 aa18.21■□□□□ 0.51
KDM1B-201ENST00000297792 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
KDM1B-201ENST00000297792 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
KDM1B-201ENST00000297792 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
KDM1B-201ENST00000297792 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
KDM1B-201ENST00000297792 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
KDM1B-201ENST00000297792 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
KDM1B-201ENST00000297792 C22orf23Q9BZE7 217 aa18.19■□□□□ 0.5
KDM1B-201ENST00000297792 INSRP06213 1382 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
KDM1B-201ENST00000297792 LNPKQ9C0E8 428 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 TRPM2O94759 1503 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 ERVK-7P63135 1459 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 PTPRTO14522 1441 aa18.18■□□□□ 0.5
KDM1B-201ENST00000297792 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
KDM1B-201ENST00000297792 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
KDM1B-201ENST00000297792 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
KDM1B-201ENST00000297792 FBLN1P23142 703 aa18.16■□□□□ 0.5
KDM1B-201ENST00000297792 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
KDM1B-201ENST00000297792 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
KDM1B-201ENST00000297792 RNF17Q9BXT8 1623 aaKnown RBP18.15■□□□□ 0.5
KDM1B-201ENST00000297792 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
KDM1B-201ENST00000297792 SPHKAPQ2M3C7 1700 aa18.14■□□□□ 0.49
KDM1B-201ENST00000297792 HSP90AB1P08238 724 aaKnown RBP18.13■□□□□ 0.49
KDM1B-201ENST00000297792 LAMC1P11047 1609 aa18.13■□□□□ 0.49
KDM1B-201ENST00000297792 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
KDM1B-201ENST00000297792 RRAGDQ9NQL2 400 aaPredicted RBP18.13■□□□□ 0.49
KDM1B-201ENST00000297792 NOB1Q9ULX3 412 aaKnown RBP18.13■□□□□ 0.49
KDM1B-201ENST00000297792 RTEL1-TNFRSF6BF6WH68 1400 aa18.12■□□□□ 0.49
KDM1B-201ENST00000297792 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
KDM1B-201ENST00000297792 SSH1Q8WYL5 1049 aa18.12■□□□□ 0.49
KDM1B-201ENST00000297792 MINK1Q8N4C8 1332 aaPredicted RBP18.11■□□□□ 0.49
KDM1B-201ENST00000297792 TRIM27P14373 513 aa18.11■□□□□ 0.49
KDM1B-201ENST00000297792 MCM4P33991 863 aa18.11■□□□□ 0.49
KDM1B-201ENST00000297792 TRAK2O60296 914 aa18.1■□□□□ 0.49
KDM1B-201ENST00000297792 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
KDM1B-201ENST00000297792 RIPK4P57078 832 aa18.1■□□□□ 0.49
KDM1B-201ENST00000297792 APBB1O00213 710 aa18.09■□□□□ 0.49
KDM1B-201ENST00000297792 TMEM57Q8N5G2 664 aa18.09■□□□□ 0.49
KDM1B-201ENST00000297792 SYNMO15061 1565 aa18.09■□□□□ 0.49
KDM1B-201ENST00000297792 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
KDM1B-201ENST00000297792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
KDM1B-201ENST00000297792 XRCC6P12956 609 aaKnown RBP eCLIP18.08■□□□□ 0.49
KDM1B-201ENST00000297792 NGEFQ8N5V2 710 aa18.08■□□□□ 0.49
KDM1B-201ENST00000297792 ABCA6Q8N139 1617 aa18.08■□□□□ 0.48
KDM1B-201ENST00000297792 ANKRD45Q5TZF3 282 aa18.08■□□□□ 0.48
KDM1B-201ENST00000297792 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
KDM1B-201ENST00000297792 CHMP5Q9NZZ3 219 aa18.08■□□□□ 0.48
KDM1B-201ENST00000297792 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
KDM1B-201ENST00000297792 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
KDM1B-201ENST00000297792 C14orf93Q9H972 538 aaKnown RBP18.07■□□□□ 0.48
KDM1B-201ENST00000297792 MYOM1P52179 1685 aa18.07■□□□□ 0.48
KDM1B-201ENST00000297792 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
KDM1B-201ENST00000297792 PNNQ9H307 717 aaKnown RBP18.07■□□□□ 0.48
KDM1B-201ENST00000297792 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
KDM1B-201ENST00000297792 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
KDM1B-201ENST00000297792 CEP152O94986 1710 aa18.06■□□□□ 0.48
KDM1B-201ENST00000297792 RSPH6AQ9H0K4 717 aa18.06■□□□□ 0.48
KDM1B-201ENST00000297792 NPATQ14207 1427 aa18.06■□□□□ 0.48
KDM1B-201ENST00000297792 HMOX1P09601 288 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 IDI1Q13907 227 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 NPC1L1Q9UHC9 1359 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 NCLP19338 710 aaKnown RBP18.05■□□□□ 0.48
KDM1B-201ENST00000297792 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 TET3O43151 1660 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
KDM1B-201ENST00000297792 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
KDM1B-201ENST00000297792 EVC2Q86UK5 1308 aa18.04■□□□□ 0.48
KDM1B-201ENST00000297792 TRIM44Q96DX7 344 aaPredicted RBP18.04■□□□□ 0.48
KDM1B-201ENST00000297792 TMPOP42166 694 aaKnown RBP18.04■□□□□ 0.48
KDM1B-201ENST00000297792 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
KDM1B-201ENST00000297792 MLECQ14165 292 aa18.03■□□□□ 0.48
KDM1B-201ENST00000297792 MAP3K4Q9Y6R4 1608 aa18.03■□□□□ 0.48
KDM1B-201ENST00000297792 CD109Q6YHK3 1445 aa18.02■□□□□ 0.48
KDM1B-201ENST00000297792 MROH2AA6NES4 1674 aa18.02■□□□□ 0.48
KDM1B-201ENST00000297792 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
KDM1B-201ENST00000297792 PPRC1Q5VV67 1664 aaKnown RBP18■□□□□ 0.47
KDM1B-201ENST00000297792 MROH1Q8NDA8 1641 aa18■□□□□ 0.47
KDM1B-201ENST00000297792 PRAM1Q96QH2 718 aa18■□□□□ 0.47
KDM1B-201ENST00000297792 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
KDM1B-201ENST00000297792 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
KDM1B-201ENST00000297792 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
KDM1B-201ENST00000297792 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
KDM1B-201ENST00000297792 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
KDM1B-201ENST00000297792 EFCAB6Q5THR3 1501 aa17.97■□□□□ 0.47
KDM1B-201ENST00000297792 VGFO15240 615 aaPredicted RBP17.97■□□□□ 0.47
KDM1B-201ENST00000297792 PRKAR2BP31323 418 aa17.97■□□□□ 0.47
KDM1B-201ENST00000297792 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
KDM1B-201ENST00000297792 KIDINS220Q9ULH0 1771 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms