RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 PLEKHH1Q9ULM0 1364 aa9.03□□□□□ -0.96
TMC1-201ENST00000297784 ABCC11Q96J66 1382 aa9.03□□□□□ -0.96
TMC1-201ENST00000297784 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
TMC1-201ENST00000297784 LRPPRCP42704 1394 aaKnown RBP9.03□□□□□ -0.96
TMC1-201ENST00000297784 WAPLQ7Z5K2 1190 aa9.02□□□□□ -0.97
TMC1-201ENST00000297784 PRAM1Q96QH2 718 aa9.02□□□□□ -0.97
TMC1-201ENST00000297784 TECPR2O15040 1411 aa9.02□□□□□ -0.97
TMC1-201ENST00000297784 KCNA4P22459 653 aa9.02□□□□□ -0.97
TMC1-201ENST00000297784 SAFB2Q14151 953 aaKnown RBP eCLIP9.01□□□□□ -0.97
TMC1-201ENST00000297784 EID1Q9Y6B2 187 aa9.01□□□□□ -0.97
TMC1-201ENST00000297784 CPS1P31327 1500 aa9.01□□□□□ -0.97
TMC1-201ENST00000297784 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.01□□□□□ -0.97
TMC1-201ENST00000297784 ROBO2Q9HCK4 1378 aa9□□□□□ -0.97
TMC1-201ENST00000297784 CHD2O14647 1828 aaKnown RBP9□□□□□ -0.97
TMC1-201ENST00000297784 DIP2AQ14689 1571 aa9□□□□□ -0.97
TMC1-201ENST00000297784 PANK3Q9H999 370 aa9□□□□□ -0.97
TMC1-201ENST00000297784 TBX22Q9Y458 520 aa9□□□□□ -0.97
TMC1-201ENST00000297784 XRN1Q8IZH2 1706 aaKnown RBP9□□□□□ -0.97
TMC1-201ENST00000297784 PRKRIP1Q9H875 184 aaPredicted RBP8.99□□□□□ -0.97
TMC1-201ENST00000297784 FAM135BQ49AJ0 1406 aa8.98□□□□□ -0.97
TMC1-201ENST00000297784 ANP32CO43423 234 aa8.98□□□□□ -0.97
TMC1-201ENST00000297784 ANKLE2Q86XL3 938 aa8.98□□□□□ -0.97
TMC1-201ENST00000297784 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
TMC1-201ENST00000297784 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
TMC1-201ENST00000297784 CCDC184Q52MB2 194 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 CABP2Q9NPB3 220 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 MINK1Q8N4C8 1332 aaPredicted RBP8.97□□□□□ -0.97
TMC1-201ENST00000297784 LMTK3Q96Q04 1460 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 NCKAP5LQ9HCH0 1330 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 STRCQ7RTU9 1775 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 CDCA8Q53HL2 280 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 SLC12A5Q9H2X9 1139 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 POGKQ9P215 609 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 AMOTL2Q9Y2J4 779 aa8.97□□□□□ -0.97
TMC1-201ENST00000297784 EVC2Q86UK5 1308 aa8.96□□□□□ -0.97
TMC1-201ENST00000297784 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.98
TMC1-201ENST00000297784 PUS7Q96PZ0 661 aaKnown RBP8.96□□□□□ -0.98
TMC1-201ENST00000297784 CDK19Q9BWU1 502 aa8.95□□□□□ -0.98
TMC1-201ENST00000297784 NPHP4O75161 1426 aaPredicted RBP8.95□□□□□ -0.98
TMC1-201ENST00000297784 PTCH1Q13635 1447 aa8.95□□□□□ -0.98
TMC1-201ENST00000297784 ADGRB2O60241 1585 aa8.95□□□□□ -0.98
TMC1-201ENST00000297784 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
TMC1-201ENST00000297784 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
TMC1-201ENST00000297784 STRCP1A6NGW2 1772 aa8.95□□□□□ -0.98
TMC1-201ENST00000297784 KCNA6P17658 529 aa8.94□□□□□ -0.98
TMC1-201ENST00000297784 HSPA2P54652 639 aa8.94□□□□□ -0.98
TMC1-201ENST00000297784 PIK3R4Q99570 1358 aa8.94□□□□□ -0.98
TMC1-201ENST00000297784 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
TMC1-201ENST00000297784 CNGB1Q14028 1251 aaPredicted RBP8.93□□□□□ -0.98
TMC1-201ENST00000297784 PARD3Q8TEW0 1356 aa8.93□□□□□ -0.98
TMC1-201ENST00000297784 USP32Q8NFA0 1604 aa8.93□□□□□ -0.98
TMC1-201ENST00000297784 WASLO00401 505 aaPredicted RBP8.93□□□□□ -0.98
TMC1-201ENST00000297784 NOP58Q9Y2X3 529 aaKnown RBP8.93□□□□□ -0.98
TMC1-201ENST00000297784 NALCNQ8IZF0 1738 aa8.92□□□□□ -0.98
TMC1-201ENST00000297784 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
TMC1-201ENST00000297784 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
TMC1-201ENST00000297784 TOPAZ1Q8N9V7 1692 aa8.92□□□□□ -0.98
TMC1-201ENST00000297784 CC2D1BQ5T0F9 858 aaKnown RBP8.92□□□□□ -0.98
TMC1-201ENST00000297784 TMC1Q8TDI8 760 aa8.92□□□□□ -0.98
TMC1-201ENST00000297784 PRR36Q9H6K5 1346 aa8.91□□□□□ -0.98
TMC1-201ENST00000297784 NWD1Q149M9 1564 aa8.91□□□□□ -0.98
TMC1-201ENST00000297784 ATP7BP35670 1465 aa8.91□□□□□ -0.98
TMC1-201ENST00000297784 A0A1W2PP64 1363 aa8.91□□□□□ -0.98
TMC1-201ENST00000297784 RBM33Q96EV2 1170 aaKnown RBP8.91□□□□□ -0.98
TMC1-201ENST00000297784 CABP1Q9NZU7 370 aa8.91□□□□□ -0.98
TMC1-201ENST00000297784 ANKRD36BQ8N2N9 1353 aa8.9□□□□□ -0.98
TMC1-201ENST00000297784 ATAD2Q6PL18 1390 aa8.9□□□□□ -0.98
TMC1-201ENST00000297784 NPC1L1Q9UHC9 1359 aa8.9□□□□□ -0.99
TMC1-201ENST00000297784 AKAP12Q02952 1782 aa8.9□□□□□ -0.99
TMC1-201ENST00000297784 KNSTRNQ9Y448 316 aa8.9□□□□□ -0.99
TMC1-201ENST00000297784 NSD3Q9BZ95 1437 aa8.89□□□□□ -0.99
TMC1-201ENST00000297784 KTN1Q86UP2 1357 aaKnown RBP8.89□□□□□ -0.99
TMC1-201ENST00000297784 NINLQ9Y2I6 1382 aa8.89□□□□□ -0.99
TMC1-201ENST00000297784 CPSF1Q10570 1443 aaKnown RBP8.89□□□□□ -0.99
TMC1-201ENST00000297784 RALBP1Q15311 655 aa8.89□□□□□ -0.99
TMC1-201ENST00000297784 NUDT16Q96DE0 195 aaKnown RBP8.89□□□□□ -0.99
TMC1-201ENST00000297784 FMN2Q9NZ56 1722 aa8.88□□□□□ -0.99
TMC1-201ENST00000297784 PPIP5K1Q6PFW1 1433 aa8.88□□□□□ -0.99
TMC1-201ENST00000297784 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
TMC1-201ENST00000297784 XIRP1Q702N8 1843 aaKnown RBP8.88□□□□□ -0.99
TMC1-201ENST00000297784 MYBBP1AQ9BQG0 1328 aaKnown RBP8.88□□□□□ -0.99
TMC1-201ENST00000297784 NKTRP30414 1462 aaKnown RBP8.88□□□□□ -0.99
TMC1-201ENST00000297784 CDC42BPGQ6DT37 1551 aa8.87□□□□□ -0.99
TMC1-201ENST00000297784 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 CCDC61Q9Y6R9 512 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 ITSN1Q15811 1721 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 ANKRD26Q9UPS8 1709 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 NRKQ7Z2Y5 1582 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 KIF20BQ96Q89 1820 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 HNRNPUQ00839 825 aaKnown RBP eCLIP8.86□□□□□ -0.99
TMC1-201ENST00000297784 MRS2Q9HD23 443 aa8.86□□□□□ -0.99
TMC1-201ENST00000297784 FYB1O15117 783 aa8.85□□□□□ -0.99
TMC1-201ENST00000297784 PPP2R1AP30153 589 aa8.85□□□□□ -0.99
TMC1-201ENST00000297784 PNISRQ8TF01 805 aaKnown RBP8.85□□□□□ -0.99
TMC1-201ENST00000297784 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
TMC1-201ENST00000297784 BRD4O60885 1362 aaPredicted RBP8.84□□□□□ -0.99
TMC1-201ENST00000297784 PLEKHG3A1L390 1219 aa8.84□□□□□ -0.99
TMC1-201ENST00000297784 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
TMC1-201ENST00000297784 UBE2Q2Q8WVN8 375 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms