RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
UBAP1-201ENST00000297661 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
UBAP1-201ENST00000297661 ASXL1Q8IXJ9 1541 aa20.23■□□□□ 0.83
UBAP1-201ENST00000297661 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
UBAP1-201ENST00000297661 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
UBAP1-201ENST00000297661 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
UBAP1-201ENST00000297661 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
UBAP1-201ENST00000297661 INSRP06213 1382 aa20.21■□□□□ 0.83
UBAP1-201ENST00000297661 SYNMO15061 1565 aa20.21■□□□□ 0.83
UBAP1-201ENST00000297661 EIF3AQ14152 1382 aaKnown RBP20.2■□□□□ 0.83
UBAP1-201ENST00000297661 TET3O43151 1660 aa20.2■□□□□ 0.82
UBAP1-201ENST00000297661 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
UBAP1-201ENST00000297661 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
UBAP1-201ENST00000297661 IDI1Q13907 227 aa20.19■□□□□ 0.82
UBAP1-201ENST00000297661 NUTM2DQ5VT03 806 aaPredicted RBP20.19■□□□□ 0.82
UBAP1-201ENST00000297661 MYOM1P52179 1685 aa20.19■□□□□ 0.82
UBAP1-201ENST00000297661 HSPA2P54652 639 aa20.18■□□□□ 0.82
UBAP1-201ENST00000297661 TRAK1Q9UPV9 953 aa20.18■□□□□ 0.82
UBAP1-201ENST00000297661 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
UBAP1-201ENST00000297661 ZC3H13Q5T200 1668 aaKnown RBP20.18■□□□□ 0.82
UBAP1-201ENST00000297661 SLFN5Q08AF3 891 aa20.18■□□□□ 0.82
UBAP1-201ENST00000297661 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
UBAP1-201ENST00000297661 FRAT2O75474 233 aaPredicted RBP20.17■□□□□ 0.82
UBAP1-201ENST00000297661 BCAR3O75815 825 aa20.17■□□□□ 0.82
UBAP1-201ENST00000297661 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
UBAP1-201ENST00000297661 TNRQ92752 1358 aa20.16■□□□□ 0.82
UBAP1-201ENST00000297661 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
UBAP1-201ENST00000297661 STAG3Q9UJ98 1225 aa20.16■□□□□ 0.82
UBAP1-201ENST00000297661 PREX1Q8TCU6 1659 aa20.15■□□□□ 0.82
UBAP1-201ENST00000297661 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
UBAP1-201ENST00000297661 PIK3C2GO75747 1445 aa20.14■□□□□ 0.82
UBAP1-201ENST00000297661 STAC3Q96MF2 364 aa20.14■□□□□ 0.82
UBAP1-201ENST00000297661 KDM5AP29375 1690 aaKnown RBP20.13■□□□□ 0.81
UBAP1-201ENST00000297661 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
UBAP1-201ENST00000297661 NOS1P29475 1434 aa20.12■□□□□ 0.81
UBAP1-201ENST00000297661 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
UBAP1-201ENST00000297661 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
UBAP1-201ENST00000297661 RGS3P49796 1198 aa20.12■□□□□ 0.81
UBAP1-201ENST00000297661 SLC12A5Q9H2X9 1139 aa20.12■□□□□ 0.81
UBAP1-201ENST00000297661 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
UBAP1-201ENST00000297661 PKNOX2Q96KN3 472 aa20.09■□□□□ 0.81
UBAP1-201ENST00000297661 CENPJQ9HC77 1338 aaPredicted RBP20.08■□□□□ 0.81
UBAP1-201ENST00000297661 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.8
UBAP1-201ENST00000297661 NPC1L1Q9UHC9 1359 aa20.07■□□□□ 0.8
UBAP1-201ENST00000297661 CENPQQ7L2Z9 268 aaPredicted RBP20.07■□□□□ 0.8
UBAP1-201ENST00000297661 SPATA31D1Q6ZQQ2 1576 aa20.07■□□□□ 0.8
UBAP1-201ENST00000297661 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
UBAP1-201ENST00000297661 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
UBAP1-201ENST00000297661 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
UBAP1-201ENST00000297661 KIF1BO60333 1816 aa20.06■□□□□ 0.8
UBAP1-201ENST00000297661 MYOM2P54296 1465 aa20.06■□□□□ 0.8
UBAP1-201ENST00000297661 C8orf34Q49A92 452 aa20.05■□□□□ 0.8
UBAP1-201ENST00000297661 NSD3Q9BZ95 1437 aa20.05■□□□□ 0.8
UBAP1-201ENST00000297661 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
UBAP1-201ENST00000297661 SAFB2Q14151 953 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBAP1-201ENST00000297661 NKTRP30414 1462 aaKnown RBP20.04■□□□□ 0.8
UBAP1-201ENST00000297661 E9PSI1 815 aa20.04■□□□□ 0.8
UBAP1-201ENST00000297661 PIK3C2BO00750 1634 aa20.03■□□□□ 0.8
UBAP1-201ENST00000297661 KIAA1210Q9ULL0 1709 aa20.03■□□□□ 0.8
UBAP1-201ENST00000297661 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
UBAP1-201ENST00000297661 MYO5BQ9ULV0 1848 aa20.03■□□□□ 0.8
UBAP1-201ENST00000297661 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
UBAP1-201ENST00000297661 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
UBAP1-201ENST00000297661 WWC1Q8IX03 1113 aa20.02■□□□□ 0.8
UBAP1-201ENST00000297661 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
UBAP1-201ENST00000297661 RRAGDQ9NQL2 400 aaPredicted RBP20.01■□□□□ 0.79
UBAP1-201ENST00000297661 IGHDP01880 384 aa20■□□□□ 0.79
UBAP1-201ENST00000297661 COG6Q9Y2V7 657 aa20■□□□□ 0.79
UBAP1-201ENST00000297661 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
UBAP1-201ENST00000297661 C14orf93Q9H972 538 aaKnown RBP19.99■□□□□ 0.79
UBAP1-201ENST00000297661 POGKQ9P215 609 aa19.98■□□□□ 0.79
UBAP1-201ENST00000297661 CEP170BQ9Y4F5 1589 aaPredicted RBP19.98■□□□□ 0.79
UBAP1-201ENST00000297661 MTHFSP49914 203 aa19.98■□□□□ 0.79
UBAP1-201ENST00000297661 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
UBAP1-201ENST00000297661 LMTK3Q96Q04 1460 aa19.98■□□□□ 0.79
UBAP1-201ENST00000297661 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
UBAP1-201ENST00000297661 LTKP29376 864 aa19.97■□□□□ 0.79
UBAP1-201ENST00000297661 GLIPR1L2Q4G1C9 344 aa19.97■□□□□ 0.79
UBAP1-201ENST00000297661 TNNQ9UQP3 1299 aa19.97■□□□□ 0.79
UBAP1-201ENST00000297661 TCP11L2Q8N4U5 519 aa19.96■□□□□ 0.79
UBAP1-201ENST00000297661 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
UBAP1-201ENST00000297661 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
UBAP1-201ENST00000297661 CABP2Q9NPB3 220 aa19.96■□□□□ 0.79
UBAP1-201ENST00000297661 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
UBAP1-201ENST00000297661 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
UBAP1-201ENST00000297661 STK26Q9P289 416 aa19.95■□□□□ 0.78
UBAP1-201ENST00000297661 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
UBAP1-201ENST00000297661 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
UBAP1-201ENST00000297661 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.78
UBAP1-201ENST00000297661 NLRP1Q9C000 1473 aa19.94■□□□□ 0.78
UBAP1-201ENST00000297661 NEURL4Q96JN8 1562 aa19.93■□□□□ 0.78
UBAP1-201ENST00000297661 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
UBAP1-201ENST00000297661 TMEM131LA2VDJ0 1609 aa19.93■□□□□ 0.78
UBAP1-201ENST00000297661 SBNO2Q9Y2G9 1366 aa19.92■□□□□ 0.78
UBAP1-201ENST00000297661 CLUAP1Q96AJ1 413 aa19.92■□□□□ 0.78
UBAP1-201ENST00000297661 RUNDC1Q96C34 613 aa19.92■□□□□ 0.78
UBAP1-201ENST00000297661 QRICH2Q9H0J4 1663 aa19.91■□□□□ 0.78
UBAP1-201ENST00000297661 L1TD1Q5T7N2 865 aaKnown RBP19.9■□□□□ 0.78
UBAP1-201ENST00000297661 SLC26A8Q96RN1 970 aa19.9■□□□□ 0.78
UBAP1-201ENST00000297661 ADGRB1O14514 1584 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms