RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 TSC1Q92574 1164 aa12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 NUP153P49790 1475 aaKnown RBP12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 NUTM2DQ5VT03 806 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 SLC12A5Q9H2X9 1139 aa12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 CARMIL2Q6F5E8 1435 aa12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 JARID2Q92833 1246 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF3-201ENST00000296315 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 NOB1Q9ULX3 412 aaKnown RBP12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
ARHGEF3-201ENST00000296315 IFT140Q96RY7 1462 aa12.87□□□□□ -0.35
ARHGEF3-201ENST00000296315 WDR62O43379 1518 aa12.87□□□□□ -0.35
ARHGEF3-201ENST00000296315 TRIM27P14373 513 aa12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 GRIN2AQ12879 1464 aa12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 RIPK4P57078 832 aa12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 TARBP1Q13395 1621 aaKnown RBP12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 PTPRGP23470 1445 aa12.86□□□□□ -0.35
ARHGEF3-201ENST00000296315 K7ELQ4 463 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF3-201ENST00000296315 IGSF3O75054 1194 aa12.84□□□□□ -0.35
ARHGEF3-201ENST00000296315 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
ARHGEF3-201ENST00000296315 PKP1Q13835 747 aa12.84□□□□□ -0.35
ARHGEF3-201ENST00000296315 A2MP01023 1474 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 SYCE3A1L190 88 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 OFD1O75665 1012 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 ZNF830Q96NB3 372 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
ARHGEF3-201ENST00000296315 DISP1Q96F81 1524 aa12.82□□□□□ -0.36
ARHGEF3-201ENST00000296315 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
ARHGEF3-201ENST00000296315 CBX1P83916 185 aa12.82□□□□□ -0.36
ARHGEF3-201ENST00000296315 TMEM132EQ6IEE7 984 aa12.82□□□□□ -0.36
ARHGEF3-201ENST00000296315 ARHGEF12Q9NZN5 1544 aa12.82□□□□□ -0.36
ARHGEF3-201ENST00000296315 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
ARHGEF3-201ENST00000296315 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
ARHGEF3-201ENST00000296315 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
ARHGEF3-201ENST00000296315 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
ARHGEF3-201ENST00000296315 C17orf53Q8N3J3 647 aaPredicted RBP12.8□□□□□ -0.36
ARHGEF3-201ENST00000296315 ZSCAN23Q3MJ62 389 aa12.8□□□□□ -0.36
ARHGEF3-201ENST00000296315 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
ARHGEF3-201ENST00000296315 THUMPD2Q9BTF0 503 aaKnown RBP12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 PBRM1Q86U86 1689 aa12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 ISY1Q9ULR0 285 aaKnown RBP12.79□□□□□ -0.36
ARHGEF3-201ENST00000296315 INSRP06213 1382 aa12.78□□□□□ -0.36
ARHGEF3-201ENST00000296315 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
ARHGEF3-201ENST00000296315 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
ARHGEF3-201ENST00000296315 DTNBO60941 627 aa12.77□□□□□ -0.36
ARHGEF3-201ENST00000296315 WDR7Q9Y4E6 1490 aa12.77□□□□□ -0.36
ARHGEF3-201ENST00000296315 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.36
ARHGEF3-201ENST00000296315 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
ARHGEF3-201ENST00000296315 STK26Q9P289 416 aa12.77□□□□□ -0.37
ARHGEF3-201ENST00000296315 ASXL1Q8IXJ9 1541 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 GPRASP1Q5JY77 1395 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 KLHL40Q2TBA0 621 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 FBLN1P23142 703 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
ARHGEF3-201ENST00000296315 C16orf71Q8IYS4 520 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF3-201ENST00000296315 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
ARHGEF3-201ENST00000296315 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
ARHGEF3-201ENST00000296315 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 PTMSP20962 102 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 KDM5DQ9BY66 1539 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 KIAA0556O60303 1618 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 KIF3BO15066 747 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 PPP1R9BQ96SB3 815 aa12.74□□□□□ -0.37
ARHGEF3-201ENST00000296315 PLA2R1Q13018 1463 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 SNX21Q969T3 373 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 ADGRL2O95490 1459 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 KIF16BQ96L93 1317 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 SMARCA5O60264 1052 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 NUCB1Q02818 461 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 PRDM4Q9UKN5 801 aa12.73□□□□□ -0.37
ARHGEF3-201ENST00000296315 HMOX1P09601 288 aa12.72□□□□□ -0.37
ARHGEF3-201ENST00000296315 SRPK2P78362 688 aaKnown RBP12.72□□□□□ -0.37
ARHGEF3-201ENST00000296315 ATP10BO94823 1461 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms