RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
SNIP1-201ENST00000296215 ICE2Q659A1 982 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
SNIP1-201ENST00000296215 CREBRFQ8IUR6 639 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 NEBLO76041 1014 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 CEP120Q8N960 986 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 IVLP07476 585 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 NCAPGQ9BPX3 1015 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
SNIP1-201ENST00000296215 GOLGA6L19H0YKK7 550 aa14.13□□□□□ -0.15
SNIP1-201ENST00000296215 ST18O60284 1047 aa14.12□□□□□ -0.15
SNIP1-201ENST00000296215 KRBA2Q6ZNG9 492 aa14.12□□□□□ -0.15
SNIP1-201ENST00000296215 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
SNIP1-201ENST00000296215 LRRFIP2Q9Y608 721 aaKnown RBP14.12□□□□□ -0.15
SNIP1-201ENST00000296215 TSC1Q92574 1164 aa14.11□□□□□ -0.15
SNIP1-201ENST00000296215 STK31Q9BXU1 1019 aa14.11□□□□□ -0.15
SNIP1-201ENST00000296215 YY1AP1Q9H869 796 aa14.1□□□□□ -0.15
SNIP1-201ENST00000296215 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
SNIP1-201ENST00000296215 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
SNIP1-201ENST00000296215 MICALL1Q8N3F8 863 aa14.1□□□□□ -0.15
SNIP1-201ENST00000296215 CASQ1P31415 396 aa14.09□□□□□ -0.15
SNIP1-201ENST00000296215 FMNL3Q8IVF7 1028 aa14.09□□□□□ -0.15
SNIP1-201ENST00000296215 JRKLQ9Y4A0 524 aa14.09□□□□□ -0.15
SNIP1-201ENST00000296215 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
SNIP1-201ENST00000296215 KIAA1328Q86T90 577 aa14.09□□□□□ -0.15
SNIP1-201ENST00000296215 CCDC97Q96F63 343 aaPredicted RBP14.09□□□□□ -0.15
SNIP1-201ENST00000296215 TMX4Q9H1E5 349 aaPredicted RBP14.09□□□□□ -0.15
SNIP1-201ENST00000296215 GOLGA6L10A6NI86 522 aa14.08□□□□□ -0.15
SNIP1-201ENST00000296215 EIF3JO75822 258 aaKnown RBP14.08□□□□□ -0.15
SNIP1-201ENST00000296215 NGEFQ8N5V2 710 aa14.08□□□□□ -0.15
SNIP1-201ENST00000296215 UBXN4Q92575 508 aa14.08□□□□□ -0.16
SNIP1-201ENST00000296215 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
SNIP1-201ENST00000296215 MAP2K1Q02750 393 aaPredicted RBP14.08□□□□□ -0.16
SNIP1-201ENST00000296215 KIF1CO43896 1103 aaKnown RBP14.08□□□□□ -0.16
SNIP1-201ENST00000296215 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
SNIP1-201ENST00000296215 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
SNIP1-201ENST00000296215 NUCKS1Q9H1E3 243 aaKnown RBP14.07□□□□□ -0.16
SNIP1-201ENST00000296215 BECN2A8MW95 431 aa14.07□□□□□ -0.16
SNIP1-201ENST00000296215 MYO6Q9UM54 1294 aa14.07□□□□□ -0.16
SNIP1-201ENST00000296215 SYCE3A1L190 88 aa14.07□□□□□ -0.16
SNIP1-201ENST00000296215 FAM184AQ8NB25 1140 aa14.07□□□□□ -0.16
SNIP1-201ENST00000296215 ESF1Q9H501 851 aaKnown RBP14.06□□□□□ -0.16
SNIP1-201ENST00000296215 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
SNIP1-201ENST00000296215 ERCC4Q92889 916 aaPredicted RBP14.06□□□□□ -0.16
SNIP1-201ENST00000296215 BCL2L12Q9HB09 334 aa14.06□□□□□ -0.16
SNIP1-201ENST00000296215 ZNF500O60304 480 aaPredicted RBP14.06□□□□□ -0.16
SNIP1-201ENST00000296215 A0A1B0GUA9 196 aa14.05□□□□□ -0.16
SNIP1-201ENST00000296215 C16orf45Q96MC5 204 aaPredicted RBP14.05□□□□□ -0.16
SNIP1-201ENST00000296215 TRIM5Q9C035 493 aa14.05□□□□□ -0.16
SNIP1-201ENST00000296215 ZNF397Q8NF99 534 aaPredicted RBP14.05□□□□□ -0.16
SNIP1-201ENST00000296215 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
SNIP1-201ENST00000296215 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
SNIP1-201ENST00000296215 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
SNIP1-201ENST00000296215 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
SNIP1-201ENST00000296215 FILIP1Q7Z7B0 1213 aa14.04□□□□□ -0.16
SNIP1-201ENST00000296215 ZNF513Q8N8E2 541 aaPredicted RBP14.04□□□□□ -0.16
SNIP1-201ENST00000296215 E2F4Q16254 413 aa14.03□□□□□ -0.16
SNIP1-201ENST00000296215 CGNL1Q0VF96 1302 aa14.03□□□□□ -0.16
SNIP1-201ENST00000296215 FSD2A1L4K1 749 aa14.03□□□□□ -0.16
SNIP1-201ENST00000296215 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
SNIP1-201ENST00000296215 PAXBP1Q9Y5B6 917 aa14.03□□□□□ -0.16
SNIP1-201ENST00000296215 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
SNIP1-201ENST00000296215 RBBP5Q15291 538 aaKnown RBP14.02□□□□□ -0.17
SNIP1-201ENST00000296215 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
SNIP1-201ENST00000296215 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.17
SNIP1-201ENST00000296215 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 IRAK4Q9NWZ3 460 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 PTPN14Q15678 1187 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 NBPF6Q5VWK0 638 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
SNIP1-201ENST00000296215 NBPF4Q96M43 638 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 ENOX2Q16206 610 aaKnown RBP14.01□□□□□ -0.17
SNIP1-201ENST00000296215 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
SNIP1-201ENST00000296215 NOL8Q76FK4 1167 aaKnown RBP14□□□□□ -0.17
SNIP1-201ENST00000296215 KIF18AQ8NI77 898 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 PANK3Q9H999 370 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
SNIP1-201ENST00000296215 SUFUQ9UMX1 484 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 ATP6V1DQ9Y5K8 247 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 ERBB4Q15303 1308 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 FOXD1Q16676 465 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 ANKRD18AQ8IVF6 992 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 USP25Q9UHP3 1055 aa14□□□□□ -0.17
SNIP1-201ENST00000296215 CAPN2P17655 700 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 NAA25Q14CX7 972 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 FAM43BQ6ZT52 329 aaPredicted RBP13.99□□□□□ -0.17
SNIP1-201ENST00000296215 ZSCAN26Q16670 478 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 RPUSD2Q8IZ73 545 aaKnown RBP13.99□□□□□ -0.17
SNIP1-201ENST00000296215 NUP133Q8WUM0 1156 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 GTF3C6Q969F1 213 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 RUFY1Q96T51 708 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 RIOK3O14730 519 aaKnown RBP13.99□□□□□ -0.17
SNIP1-201ENST00000296215 ATP2B3Q16720 1220 aa13.99□□□□□ -0.17
SNIP1-201ENST00000296215 ERLIN1O75477 346 aa13.98□□□□□ -0.17
SNIP1-201ENST00000296215 SMC2O95347 1197 aa13.98□□□□□ -0.17
SNIP1-201ENST00000296215 GCKP35557 465 aa13.98□□□□□ -0.17
SNIP1-201ENST00000296215 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
SNIP1-201ENST00000296215 IPO7O95373 1038 aaKnown RBP13.98□□□□□ -0.17
SNIP1-201ENST00000296215 EP400NLQ6ZTU2 488 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms