RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.19■□□□□ 0.98
CCDC140-201ENST00000295226 DISP3Q9P2K9 1392 aa21.18■□□□□ 0.98
CCDC140-201ENST00000295226 POLR3GLQ9BT43 218 aa21.18■□□□□ 0.98
CCDC140-201ENST00000295226 C14orf37Q86TY3 774 aa21.17■□□□□ 0.98
CCDC140-201ENST00000295226 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
CCDC140-201ENST00000295226 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
CCDC140-201ENST00000295226 TMF1P82094 1093 aa21.15■□□□□ 0.98
CCDC140-201ENST00000295226 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
CCDC140-201ENST00000295226 CABP2Q9NPB3 220 aa21.14■□□□□ 0.97
CCDC140-201ENST00000295226 SBNO2Q9Y2G9 1366 aa21.13■□□□□ 0.97
CCDC140-201ENST00000295226 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
CCDC140-201ENST00000295226 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
CCDC140-201ENST00000295226 KIF7Q2M1P5 1343 aa21.12■□□□□ 0.97
CCDC140-201ENST00000295226 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
CCDC140-201ENST00000295226 TULP4Q9NRJ4 1543 aa21.12■□□□□ 0.97
CCDC140-201ENST00000295226 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
CCDC140-201ENST00000295226 WASLO00401 505 aaPredicted RBP21.12■□□□□ 0.97
CCDC140-201ENST00000295226 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
CCDC140-201ENST00000295226 NALCNQ8IZF0 1738 aa21.1■□□□□ 0.97
CCDC140-201ENST00000295226 XIRP1Q702N8 1843 aaKnown RBP21.1■□□□□ 0.97
CCDC140-201ENST00000295226 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
CCDC140-201ENST00000295226 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
CCDC140-201ENST00000295226 CCDC7Q96M83 1385 aa21.08■□□□□ 0.97
CCDC140-201ENST00000295226 C19orf44Q9H6X5 657 aa21.07■□□□□ 0.96
CCDC140-201ENST00000295226 SLC24A1O60721 1099 aa21.06■□□□□ 0.96
CCDC140-201ENST00000295226 PRR36Q9H6K5 1346 aa21.04■□□□□ 0.96
CCDC140-201ENST00000295226 ADGRB2O60241 1585 aa21.04■□□□□ 0.96
CCDC140-201ENST00000295226 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
CCDC140-201ENST00000295226 NUDT16Q96DE0 195 aaKnown RBP21.03■□□□□ 0.96
CCDC140-201ENST00000295226 NCOA3Q9Y6Q9 1424 aa21.02■□□□□ 0.96
CCDC140-201ENST00000295226 TMC1Q8TDI8 760 aa21.02■□□□□ 0.96
CCDC140-201ENST00000295226 MSH6P52701 1360 aa21.02■□□□□ 0.96
CCDC140-201ENST00000295226 ATF3P18847 181 aa21.02■□□□□ 0.95
CCDC140-201ENST00000295226 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.95
CCDC140-201ENST00000295226 SLC12A5Q9H2X9 1139 aa21.01■□□□□ 0.95
CCDC140-201ENST00000295226 RGPD8O14715 1765 aaPredicted RBP21■□□□□ 0.95
CCDC140-201ENST00000295226 CDC42BPGQ6DT37 1551 aa20.99■□□□□ 0.95
CCDC140-201ENST00000295226 CABP1Q9NZU7 370 aa20.99■□□□□ 0.95
CCDC140-201ENST00000295226 FMN2Q9NZ56 1722 aa20.99■□□□□ 0.95
CCDC140-201ENST00000295226 USP32Q8NFA0 1604 aa20.98■□□□□ 0.95
CCDC140-201ENST00000295226 PUS7Q96PZ0 661 aaKnown RBP20.97■□□□□ 0.95
CCDC140-201ENST00000295226 ATP7BP35670 1465 aa20.97■□□□□ 0.95
CCDC140-201ENST00000295226 ATAD2Q6PL18 1390 aa20.96■□□□□ 0.95
CCDC140-201ENST00000295226 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
CCDC140-201ENST00000295226 CCDC61Q9Y6R9 512 aa20.96■□□□□ 0.95
CCDC140-201ENST00000295226 PMFBP1Q8TBY8 1022 aa20.96■□□□□ 0.95
CCDC140-201ENST00000295226 ORAI2Q96SN7 254 aa20.96■□□□□ 0.95
CCDC140-201ENST00000295226 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
CCDC140-201ENST00000295226 ESCO1Q5FWF5 840 aa20.94■□□□□ 0.94
CCDC140-201ENST00000295226 DCCP43146 1447 aa20.94■□□□□ 0.94
CCDC140-201ENST00000295226 MYOM1P52179 1685 aa20.93■□□□□ 0.94
CCDC140-201ENST00000295226 PANK3Q9H999 370 aa20.93■□□□□ 0.94
CCDC140-201ENST00000295226 MST1RQ04912 1400 aa20.93■□□□□ 0.94
CCDC140-201ENST00000295226 C1orf167Q5SNV9 1468 aa20.92■□□□□ 0.94
CCDC140-201ENST00000295226 CERKQ8TCT0 537 aa20.92■□□□□ 0.94
CCDC140-201ENST00000295226 SLAIN2Q9P270 581 aa20.92■□□□□ 0.94
CCDC140-201ENST00000295226 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
CCDC140-201ENST00000295226 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.94
CCDC140-201ENST00000295226 ACEP12821 1306 aa20.88■□□□□ 0.93
CCDC140-201ENST00000295226 TOPAZ1Q8N9V7 1692 aa20.88■□□□□ 0.93
CCDC140-201ENST00000295226 PLEKHG3A1L390 1219 aa20.88■□□□□ 0.93
CCDC140-201ENST00000295226 CARD14Q9BXL6 1004 aa20.88■□□□□ 0.93
CCDC140-201ENST00000295226 NGDNQ8NEJ9 315 aaKnown RBP20.87■□□□□ 0.93
CCDC140-201ENST00000295226 DDX17Q92841 729 aaKnown RBP20.87■□□□□ 0.93
CCDC140-201ENST00000295226 CD163L1Q9NR16 1453 aa20.87■□□□□ 0.93
CCDC140-201ENST00000295226 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
CCDC140-201ENST00000295226 FOXO3O43524 673 aa20.86■□□□□ 0.93
CCDC140-201ENST00000295226 CNGB1Q14028 1251 aaPredicted RBP20.86■□□□□ 0.93
CCDC140-201ENST00000295226 ITSN1Q15811 1721 aa20.85■□□□□ 0.93
CCDC140-201ENST00000295226 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
CCDC140-201ENST00000295226 BRINP3Q76B58 766 aa20.85■□□□□ 0.93
CCDC140-201ENST00000295226 TERF2IPQ9NYB0 399 aa20.85■□□□□ 0.93
CCDC140-201ENST00000295226 NINLQ9Y2I6 1382 aa20.84■□□□□ 0.93
CCDC140-201ENST00000295226 UBAP1LF5GYI3 381 aa20.84■□□□□ 0.93
CCDC140-201ENST00000295226 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
CCDC140-201ENST00000295226 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
CCDC140-201ENST00000295226 ANKRD36BQ8N2N9 1353 aa20.84■□□□□ 0.93
CCDC140-201ENST00000295226 PIP4K2BP78356 416 aa20.83■□□□□ 0.93
CCDC140-201ENST00000295226 CPSF1Q10570 1443 aaKnown RBP20.82■□□□□ 0.92
CCDC140-201ENST00000295226 PER1O15534 1290 aaPredicted RBP20.82■□□□□ 0.92
CCDC140-201ENST00000295226 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
CCDC140-201ENST00000295226 TOM1O60784 492 aa20.81■□□□□ 0.92
CCDC140-201ENST00000295226 POLR3AO14802 1390 aaPredicted RBP20.81■□□□□ 0.92
CCDC140-201ENST00000295226 PSME1Q06323 249 aa20.8■□□□□ 0.92
CCDC140-201ENST00000295226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.8■□□□□ 0.92
CCDC140-201ENST00000295226 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
CCDC140-201ENST00000295226 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
CCDC140-201ENST00000295226 ZNF692Q9BU19 519 aaPredicted RBP20.79■□□□□ 0.92
CCDC140-201ENST00000295226 AKAP12Q02952 1782 aa20.78■□□□□ 0.92
CCDC140-201ENST00000295226 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
CCDC140-201ENST00000295226 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
CCDC140-201ENST00000295226 USP6P35125 1406 aa20.77■□□□□ 0.91
CCDC140-201ENST00000295226 KRT28Q7Z3Y7 464 aa20.77■□□□□ 0.91
CCDC140-201ENST00000295226 PAK3O75914 559 aaPredicted RBP20.76■□□□□ 0.91
CCDC140-201ENST00000295226 KIF1AQ12756 1690 aa20.75■□□□□ 0.91
CCDC140-201ENST00000295226 ROBO1Q9Y6N7 1651 aa20.75■□□□□ 0.91
CCDC140-201ENST00000295226 MON2Q7Z3U7 1717 aa20.74■□□□□ 0.91
CCDC140-201ENST00000295226 CC2D1BQ5T0F9 858 aaKnown RBP20.74■□□□□ 0.91
CCDC140-201ENST00000295226 ZRANB1Q9UGI0 708 aa20.74■□□□□ 0.91
CCDC140-201ENST00000295226 TTC21BQ7Z4L5 1316 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms