RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 KNSTRNQ9Y448 316 aa20.08■□□□□ 0.81
LRRTM1-201ENST00000295057 MS4A1P11836 297 aa20.08■□□□□ 0.8
LRRTM1-201ENST00000295057 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
LRRTM1-201ENST00000295057 NLRP13Q86W25 1043 aa20.06■□□□□ 0.8
LRRTM1-201ENST00000295057 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
LRRTM1-201ENST00000295057 PLIN1O60240 522 aa20.06■□□□□ 0.8
LRRTM1-201ENST00000295057 AMER1Q5JTC6 1135 aaPredicted RBP20.05■□□□□ 0.8
LRRTM1-201ENST00000295057 ESF1Q9H501 851 aaKnown RBP20.05■□□□□ 0.8
LRRTM1-201ENST00000295057 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
LRRTM1-201ENST00000295057 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
LRRTM1-201ENST00000295057 CDCA7LQ96GN5 454 aa20.04■□□□□ 0.8
LRRTM1-201ENST00000295057 CARD14Q9BXL6 1004 aa20.04■□□□□ 0.8
LRRTM1-201ENST00000295057 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
LRRTM1-201ENST00000295057 GSE1Q14687 1217 aa20.03■□□□□ 0.8
LRRTM1-201ENST00000295057 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
LRRTM1-201ENST00000295057 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
LRRTM1-201ENST00000295057 MYOM1P52179 1685 aa20.02■□□□□ 0.8
LRRTM1-201ENST00000295057 SLC12A5Q9H2X9 1139 aa20.02■□□□□ 0.8
LRRTM1-201ENST00000295057 NFKBIBQ15653 356 aa20.01■□□□□ 0.79
LRRTM1-201ENST00000295057 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
LRRTM1-201ENST00000295057 EIF5BO60841 1220 aaKnown RBP19.99■□□□□ 0.79
LRRTM1-201ENST00000295057 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
LRRTM1-201ENST00000295057 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
LRRTM1-201ENST00000295057 FRAT1Q92837 279 aaPredicted RBP19.98■□□□□ 0.79
LRRTM1-201ENST00000295057 PPP2R1AP30153 589 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 DDRGK1Q96HY6 314 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 CRBNQ96SW2 442 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 CABP2Q9NPB3 220 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 MYO3AQ8NEV4 1616 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 ZFYVE9O95405 1425 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 QRICH2Q9H0J4 1663 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 SBNO2Q9Y2G9 1366 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 A2ML1A8K2U0 1454 aa19.97■□□□□ 0.79
LRRTM1-201ENST00000295057 SPATA31D1Q6ZQQ2 1576 aa19.96■□□□□ 0.79
LRRTM1-201ENST00000295057 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
LRRTM1-201ENST00000295057 MINK1Q8N4C8 1332 aaPredicted RBP19.94■□□□□ 0.78
LRRTM1-201ENST00000295057 RIMS2Q9UQ26 1411 aa19.93■□□□□ 0.78
LRRTM1-201ENST00000295057 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
LRRTM1-201ENST00000295057 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
LRRTM1-201ENST00000295057 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
LRRTM1-201ENST00000295057 C20orf194Q5TEA3 1177 aa19.91■□□□□ 0.78
LRRTM1-201ENST00000295057 POGKQ9P215 609 aa19.91■□□□□ 0.78
LRRTM1-201ENST00000295057 YTHDC2Q9H6S0 1430 aaKnown RBP19.91■□□□□ 0.78
LRRTM1-201ENST00000295057 TNNT2P45379 298 aaPredicted RBP19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 ADAMTS8Q9UP79 889 aa19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 ALKQ9UM73 1620 aa19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
LRRTM1-201ENST00000295057 NSD3Q9BZ95 1437 aa19.89■□□□□ 0.77
LRRTM1-201ENST00000295057 SRPK2P78362 688 aaKnown RBP19.89■□□□□ 0.77
LRRTM1-201ENST00000295057 TNRQ92752 1358 aa19.88■□□□□ 0.77
LRRTM1-201ENST00000295057 PTPRMP28827 1452 aa19.87■□□□□ 0.77
LRRTM1-201ENST00000295057 DAXXQ9UER7 740 aaPredicted RBP19.86■□□□□ 0.77
LRRTM1-201ENST00000295057 FRAT2O75474 233 aaPredicted RBP19.85■□□□□ 0.77
LRRTM1-201ENST00000295057 PLEKHH1Q9ULM0 1364 aa19.85■□□□□ 0.77
LRRTM1-201ENST00000295057 KDM2BQ8NHM5 1336 aa19.84■□□□□ 0.77
LRRTM1-201ENST00000295057 METP08581 1390 aa19.83■□□□□ 0.77
LRRTM1-201ENST00000295057 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.77
LRRTM1-201ENST00000295057 RSPH6AQ9H0K4 717 aa19.83■□□□□ 0.76
LRRTM1-201ENST00000295057 C8orf34Q49A92 452 aa19.82■□□□□ 0.76
LRRTM1-201ENST00000295057 PKNOX2Q96KN3 472 aa19.82■□□□□ 0.76
LRRTM1-201ENST00000295057 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
LRRTM1-201ENST00000295057 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
LRRTM1-201ENST00000295057 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
LRRTM1-201ENST00000295057 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
LRRTM1-201ENST00000295057 CCDC146Q8IYE0 955 aa19.8■□□□□ 0.76
LRRTM1-201ENST00000295057 LTKP29376 864 aa19.8■□□□□ 0.76
LRRTM1-201ENST00000295057 FAM161AQ3B820 660 aa19.78■□□□□ 0.76
LRRTM1-201ENST00000295057 BLMP54132 1417 aaPredicted RBP19.78■□□□□ 0.76
LRRTM1-201ENST00000295057 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
LRRTM1-201ENST00000295057 TMEM2Q9UHN6 1383 aa19.77■□□□□ 0.76
LRRTM1-201ENST00000295057 A0A1W2PP64 1363 aa19.77■□□□□ 0.75
LRRTM1-201ENST00000295057 NRXN3Q9Y4C0 1643 aa19.76■□□□□ 0.75
LRRTM1-201ENST00000295057 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
LRRTM1-201ENST00000295057 ANKRD36BQ8N2N9 1353 aa19.76■□□□□ 0.75
LRRTM1-201ENST00000295057 CENPQQ7L2Z9 268 aaPredicted RBP19.76■□□□□ 0.75
LRRTM1-201ENST00000295057 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
LRRTM1-201ENST00000295057 RGS3P49796 1198 aa19.75■□□□□ 0.75
LRRTM1-201ENST00000295057 PUS7Q96PZ0 661 aaKnown RBP19.74■□□□□ 0.75
LRRTM1-201ENST00000295057 GGNBP2Q9H3C7 697 aa19.74■□□□□ 0.75
LRRTM1-201ENST00000295057 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
LRRTM1-201ENST00000295057 SETD1AO15047 1707 aaKnown RBP19.73■□□□□ 0.75
LRRTM1-201ENST00000295057 NCKAP5LQ9HCH0 1330 aa19.73■□□□□ 0.75
LRRTM1-201ENST00000295057 UBR1Q8IWV7 1749 aa19.72■□□□□ 0.75
LRRTM1-201ENST00000295057 FAM43AQ8N2R8 423 aa19.72■□□□□ 0.75
LRRTM1-201ENST00000295057 ABCC11Q96J66 1382 aa19.72■□□□□ 0.75
LRRTM1-201ENST00000295057 MTHFSP49914 203 aa19.71■□□□□ 0.75
LRRTM1-201ENST00000295057 HDGFP51858 240 aaKnown RBP19.71■□□□□ 0.75
LRRTM1-201ENST00000295057 CD163L1Q9NR16 1453 aa19.7■□□□□ 0.74
LRRTM1-201ENST00000295057 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
LRRTM1-201ENST00000295057 C3P01024 1663 aa19.69■□□□□ 0.74
LRRTM1-201ENST00000295057 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
LRRTM1-201ENST00000295057 APAF1O14727 1248 aa19.68■□□□□ 0.74
LRRTM1-201ENST00000295057 DUSP27Q5VZP5 1158 aa19.67■□□□□ 0.74
LRRTM1-201ENST00000295057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.67■□□□□ 0.74
LRRTM1-201ENST00000295057 TERF2IPQ9NYB0 399 aa19.67■□□□□ 0.74
LRRTM1-201ENST00000295057 ADAMTS13Q76LX8 1427 aa19.67■□□□□ 0.74
LRRTM1-201ENST00000295057 FYB1O15117 783 aa19.67■□□□□ 0.74
LRRTM1-201ENST00000295057 FBLN1P23142 703 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms