RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 NPC1L1Q9UHC9 1359 aa22.83■■□□□ 1.25
SYVN1-201ENST00000294256 SLC4A3P48751 1232 aa22.83■■□□□ 1.25
SYVN1-201ENST00000294256 POGKQ9P215 609 aa22.82■■□□□ 1.24
SYVN1-201ENST00000294256 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
SYVN1-201ENST00000294256 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
SYVN1-201ENST00000294256 CLUAP1Q96AJ1 413 aa22.82■■□□□ 1.24
SYVN1-201ENST00000294256 ADGRB3O60242 1522 aa22.81■■□□□ 1.24
SYVN1-201ENST00000294256 YEATS2Q9ULM3 1422 aa22.81■■□□□ 1.24
SYVN1-201ENST00000294256 TNNQ9UQP3 1299 aa22.8■■□□□ 1.24
SYVN1-201ENST00000294256 KIAA1210Q9ULL0 1709 aa22.8■■□□□ 1.24
SYVN1-201ENST00000294256 HECW2Q9P2P5 1572 aa22.79■■□□□ 1.24
SYVN1-201ENST00000294256 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
SYVN1-201ENST00000294256 MLH3Q9UHC1 1453 aa22.79■■□□□ 1.24
SYVN1-201ENST00000294256 MS4A1P11836 297 aa22.79■■□□□ 1.24
SYVN1-201ENST00000294256 CENPQQ7L2Z9 268 aaPredicted RBP22.79■■□□□ 1.24
SYVN1-201ENST00000294256 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
SYVN1-201ENST00000294256 ABCC3O15438 1527 aa22.78■■□□□ 1.24
SYVN1-201ENST00000294256 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
SYVN1-201ENST00000294256 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
SYVN1-201ENST00000294256 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
SYVN1-201ENST00000294256 TRMT2AQ8IZ69 625 aaKnown RBP22.77■■□□□ 1.24
SYVN1-201ENST00000294256 DEKP35659 375 aaKnown RBP22.77■■□□□ 1.24
SYVN1-201ENST00000294256 FAM69CQ0P6D2 419 aa22.77■■□□□ 1.24
SYVN1-201ENST00000294256 FBLN1P23142 703 aa22.76■■□□□ 1.23
SYVN1-201ENST00000294256 RPGRIP1LQ68CZ1 1315 aa22.76■■□□□ 1.23
SYVN1-201ENST00000294256 KDM2BQ8NHM5 1336 aa22.76■■□□□ 1.23
SYVN1-201ENST00000294256 RTL5Q5HYW3 569 aaPredicted RBP22.76■■□□□ 1.23
SYVN1-201ENST00000294256 NRXN1Q9ULB1 1477 aa22.76■■□□□ 1.23
SYVN1-201ENST00000294256 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
SYVN1-201ENST00000294256 IFT172Q9UG01 1749 aa22.75■■□□□ 1.23
SYVN1-201ENST00000294256 IGHDP01880 384 aa22.74■■□□□ 1.23
SYVN1-201ENST00000294256 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
SYVN1-201ENST00000294256 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
SYVN1-201ENST00000294256 SBNO2Q9Y2G9 1366 aa22.73■■□□□ 1.23
SYVN1-201ENST00000294256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.72■■□□□ 1.23
SYVN1-201ENST00000294256 TSR2Q969E8 191 aaKnown RBP22.72■■□□□ 1.23
SYVN1-201ENST00000294256 ADGRB1O14514 1584 aa22.72■■□□□ 1.23
SYVN1-201ENST00000294256 SIGLEC1Q9BZZ2 1709 aa22.71■■□□□ 1.23
SYVN1-201ENST00000294256 PPLO60437 1756 aa22.71■■□□□ 1.23
SYVN1-201ENST00000294256 WAPLQ7Z5K2 1190 aa22.68■■□□□ 1.22
SYVN1-201ENST00000294256 BCL11AQ9H165 835 aa22.68■■□□□ 1.22
SYVN1-201ENST00000294256 GLI2P10070 1586 aa22.67■■□□□ 1.22
SYVN1-201ENST00000294256 A0A1W2PP64 1363 aa22.67■■□□□ 1.22
SYVN1-201ENST00000294256 SLC52A1Q9NWF4 448 aa22.67■■□□□ 1.22
SYVN1-201ENST00000294256 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
SYVN1-201ENST00000294256 DAXXQ9UER7 740 aaPredicted RBP22.67■■□□□ 1.22
SYVN1-201ENST00000294256 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
SYVN1-201ENST00000294256 RLBP1P12271 317 aa22.66■■□□□ 1.22
SYVN1-201ENST00000294256 NEURL4Q96JN8 1562 aa22.66■■□□□ 1.22
SYVN1-201ENST00000294256 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
SYVN1-201ENST00000294256 NEFMP07197 916 aa22.65■■□□□ 1.22
SYVN1-201ENST00000294256 CFAP74Q9C0B2 1584 aa22.65■■□□□ 1.22
SYVN1-201ENST00000294256 SETBP1Q9Y6X0 1596 aa22.65■■□□□ 1.22
SYVN1-201ENST00000294256 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
SYVN1-201ENST00000294256 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
SYVN1-201ENST00000294256 FAM161AQ3B820 660 aa22.64■■□□□ 1.22
SYVN1-201ENST00000294256 TULP4Q9NRJ4 1543 aa22.64■■□□□ 1.22
SYVN1-201ENST00000294256 DIP2CQ9Y2E4 1556 aa22.64■■□□□ 1.21
SYVN1-201ENST00000294256 CDK19Q9BWU1 502 aa22.64■■□□□ 1.21
SYVN1-201ENST00000294256 C8orf34Q49A92 452 aa22.63■■□□□ 1.21
SYVN1-201ENST00000294256 MYO3AQ8NEV4 1616 aa22.62■■□□□ 1.21
SYVN1-201ENST00000294256 NEO1Q92859 1461 aa22.62■■□□□ 1.21
SYVN1-201ENST00000294256 FYB1O15117 783 aa22.62■■□□□ 1.21
SYVN1-201ENST00000294256 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
SYVN1-201ENST00000294256 TERF2IPQ9NYB0 399 aa22.61■■□□□ 1.21
SYVN1-201ENST00000294256 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
SYVN1-201ENST00000294256 EXOSC9Q06265 439 aaKnown RBP22.58■■□□□ 1.21
SYVN1-201ENST00000294256 PDE3AQ14432 1141 aa22.58■■□□□ 1.21
SYVN1-201ENST00000294256 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
SYVN1-201ENST00000294256 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
SYVN1-201ENST00000294256 FTSJ3Q8IY81 847 aaKnown RBP22.57■■□□□ 1.2
SYVN1-201ENST00000294256 MYO5BQ9ULV0 1848 aa22.57■■□□□ 1.2
SYVN1-201ENST00000294256 WDR63Q8IWG1 891 aa22.57■■□□□ 1.2
SYVN1-201ENST00000294256 MYH16Q9H6N6 1097 aa22.57■■□□□ 1.2
SYVN1-201ENST00000294256 NGEFQ8N5V2 710 aa22.56■■□□□ 1.2
SYVN1-201ENST00000294256 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
SYVN1-201ENST00000294256 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
SYVN1-201ENST00000294256 RIPK4P57078 832 aa22.56■■□□□ 1.2
SYVN1-201ENST00000294256 PIK3C2BO00750 1634 aa22.56■■□□□ 1.2
SYVN1-201ENST00000294256 SHPRHQ149N8 1683 aa22.55■■□□□ 1.2
SYVN1-201ENST00000294256 HMOX1P09601 288 aa22.55■■□□□ 1.2
SYVN1-201ENST00000294256 NCKAP5LQ9HCH0 1330 aa22.55■■□□□ 1.2
SYVN1-201ENST00000294256 NUTM2FA1L443 756 aa22.55■■□□□ 1.2
SYVN1-201ENST00000294256 TMPOP42166 694 aaKnown RBP22.55■■□□□ 1.2
SYVN1-201ENST00000294256 DDRGK1Q96HY6 314 aa22.55■■□□□ 1.2
SYVN1-201ENST00000294256 ZC3H13Q5T200 1668 aaKnown RBP22.55■■□□□ 1.2
SYVN1-201ENST00000294256 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
SYVN1-201ENST00000294256 YTHDC2Q9H6S0 1430 aaKnown RBP22.54■■□□□ 1.2
SYVN1-201ENST00000294256 SEC24BO95487 1268 aa22.53■■□□□ 1.2
SYVN1-201ENST00000294256 DIAPH1O60610 1272 aaKnown RBP22.52■■□□□ 1.2
SYVN1-201ENST00000294256 ZRANB1Q9UGI0 708 aa22.52■■□□□ 1.2
SYVN1-201ENST00000294256 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
SYVN1-201ENST00000294256 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
SYVN1-201ENST00000294256 THUMPD2Q9BTF0 503 aaKnown RBP22.51■■□□□ 1.19
SYVN1-201ENST00000294256 ITPRIPQ8IWB1 547 aa22.5■■□□□ 1.19
SYVN1-201ENST00000294256 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
SYVN1-201ENST00000294256 TRIM35Q9UPQ4 493 aa22.49■■□□□ 1.19
SYVN1-201ENST00000294256 ABCC11Q96J66 1382 aa22.49■■□□□ 1.19
SYVN1-201ENST00000294256 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
SYVN1-201ENST00000294256 RICTORQ6R327 1708 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms