RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 C14orf93Q9H972 538 aaKnown RBP21.81■■□□□ 1.08
CHRNE-201ENST00000293780 NGEFQ8N5V2 710 aa21.8■■□□□ 1.08
CHRNE-201ENST00000293780 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CHRNE-201ENST00000293780 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
CHRNE-201ENST00000293780 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
CHRNE-201ENST00000293780 FRAT1Q92837 279 aaPredicted RBP21.79■■□□□ 1.08
CHRNE-201ENST00000293780 DAXXQ9UER7 740 aaPredicted RBP21.78■■□□□ 1.08
CHRNE-201ENST00000293780 LMTK2Q8IWU2 1503 aa21.78■■□□□ 1.08
CHRNE-201ENST00000293780 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
CHRNE-201ENST00000293780 TCP11L2Q8N4U5 519 aa21.78■■□□□ 1.08
CHRNE-201ENST00000293780 RUNDC1Q96C34 613 aa21.78■■□□□ 1.08
CHRNE-201ENST00000293780 NPATQ14207 1427 aa21.77■■□□□ 1.08
CHRNE-201ENST00000293780 SHPRHQ149N8 1683 aa21.77■■□□□ 1.08
CHRNE-201ENST00000293780 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.08
CHRNE-201ENST00000293780 FAM69CQ0P6D2 419 aa21.77■■□□□ 1.07
CHRNE-201ENST00000293780 NFKBIBQ15653 356 aa21.77■■□□□ 1.07
CHRNE-201ENST00000293780 SETBP1Q9Y6X0 1596 aa21.76■■□□□ 1.07
CHRNE-201ENST00000293780 MTHFSP49914 203 aa21.76■■□□□ 1.07
CHRNE-201ENST00000293780 CLUAP1Q96AJ1 413 aa21.76■■□□□ 1.07
CHRNE-201ENST00000293780 TNNQ9UQP3 1299 aa21.75■■□□□ 1.07
CHRNE-201ENST00000293780 ZNF518AQ6AHZ1 1483 aa21.75■■□□□ 1.07
CHRNE-201ENST00000293780 QRICH2Q9H0J4 1663 aa21.74■■□□□ 1.07
CHRNE-201ENST00000293780 ADGRB1O14514 1584 aa21.74■■□□□ 1.07
CHRNE-201ENST00000293780 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
CHRNE-201ENST00000293780 PPLO60437 1756 aa21.73■■□□□ 1.07
CHRNE-201ENST00000293780 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
CHRNE-201ENST00000293780 ZC3H13Q5T200 1668 aaKnown RBP21.72■■□□□ 1.07
CHRNE-201ENST00000293780 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
CHRNE-201ENST00000293780 SEC24BO95487 1268 aa21.7■■□□□ 1.06
CHRNE-201ENST00000293780 RLBP1P12271 317 aa21.7■■□□□ 1.06
CHRNE-201ENST00000293780 PRKCSHP14314 528 aaPredicted RBP21.7■■□□□ 1.06
CHRNE-201ENST00000293780 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
CHRNE-201ENST00000293780 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
CHRNE-201ENST00000293780 IQSEC2Q5JU85 1478 aa21.7■■□□□ 1.06
CHRNE-201ENST00000293780 FRMPD1Q5SYB0 1578 aa21.69■■□□□ 1.06
CHRNE-201ENST00000293780 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
CHRNE-201ENST00000293780 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
CHRNE-201ENST00000293780 USP19O94966 1318 aa21.69■■□□□ 1.06
CHRNE-201ENST00000293780 ANO8Q9HCE9 1232 aaPredicted RBP21.69■■□□□ 1.06
CHRNE-201ENST00000293780 NINLQ9Y2I6 1382 aa21.68■■□□□ 1.06
CHRNE-201ENST00000293780 GLI2P10070 1586 aa21.68■■□□□ 1.06
CHRNE-201ENST00000293780 WDR63Q8IWG1 891 aa21.68■■□□□ 1.06
CHRNE-201ENST00000293780 PCDHB15Q9Y5E8 787 aa21.68■■□□□ 1.06
CHRNE-201ENST00000293780 SAFB2Q14151 953 aaKnown RBP eCLIP21.67■■□□□ 1.06
CHRNE-201ENST00000293780 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
CHRNE-201ENST00000293780 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
CHRNE-201ENST00000293780 CFAP53Q96M91 514 aa21.66■■□□□ 1.06
CHRNE-201ENST00000293780 CFAP74Q9C0B2 1584 aa21.66■■□□□ 1.06
CHRNE-201ENST00000293780 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
CHRNE-201ENST00000293780 U2AF1L5P0DN76 240 aaPredicted RBP21.64■■□□□ 1.05
CHRNE-201ENST00000293780 U2AF1Q01081 240 aaKnown RBP eCLIP21.64■■□□□ 1.05
CHRNE-201ENST00000293780 EVC2Q86UK5 1308 aa21.64■■□□□ 1.05
CHRNE-201ENST00000293780 GSE1Q14687 1217 aa21.64■■□□□ 1.05
CHRNE-201ENST00000293780 MAPK8IP3Q9UPT6 1336 aa21.63■■□□□ 1.05
CHRNE-201ENST00000293780 NEO1Q92859 1461 aa21.63■■□□□ 1.05
CHRNE-201ENST00000293780 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
CHRNE-201ENST00000293780 CCDC27Q2M243 656 aa21.63■■□□□ 1.05
CHRNE-201ENST00000293780 ABCC3O15438 1527 aa21.62■■□□□ 1.05
CHRNE-201ENST00000293780 TULP4Q9NRJ4 1543 aa21.62■■□□□ 1.05
CHRNE-201ENST00000293780 FRAT2O75474 233 aaPredicted RBP21.62■■□□□ 1.05
CHRNE-201ENST00000293780 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
CHRNE-201ENST00000293780 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
CHRNE-201ENST00000293780 PMFBP1Q8TBY8 1022 aa21.61■■□□□ 1.05
CHRNE-201ENST00000293780 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
CHRNE-201ENST00000293780 SIGLEC1Q9BZZ2 1709 aa21.6■■□□□ 1.05
CHRNE-201ENST00000293780 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
CHRNE-201ENST00000293780 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
CHRNE-201ENST00000293780 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
CHRNE-201ENST00000293780 VGFO15240 615 aaPredicted RBP21.6■■□□□ 1.05
CHRNE-201ENST00000293780 RTN4Q9NQC3 1192 aaKnown RBP21.59■■□□□ 1.05
CHRNE-201ENST00000293780 STK26Q9P289 416 aa21.59■■□□□ 1.05
CHRNE-201ENST00000293780 PDZRN3Q9UPQ7 1066 aa21.58■■□□□ 1.05
CHRNE-201ENST00000293780 TSR2Q969E8 191 aaKnown RBP21.58■■□□□ 1.05
CHRNE-201ENST00000293780 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
CHRNE-201ENST00000293780 ARHGEF28Q8N1W1 1705 aaKnown RBP21.57■■□□□ 1.04
CHRNE-201ENST00000293780 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
CHRNE-201ENST00000293780 IDI1Q13907 227 aa21.56■■□□□ 1.04
CHRNE-201ENST00000293780 GGNBP2Q9H3C7 697 aa21.56■■□□□ 1.04
CHRNE-201ENST00000293780 NEXMIFQ5QGS0 1516 aa21.55■■□□□ 1.04
CHRNE-201ENST00000293780 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
CHRNE-201ENST00000293780 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
CHRNE-201ENST00000293780 A0A1W2PP64 1363 aa21.54■■□□□ 1.04
CHRNE-201ENST00000293780 NSD2O96028 1365 aa21.54■■□□□ 1.04
CHRNE-201ENST00000293780 SRPK2P78362 688 aaKnown RBP21.54■■□□□ 1.04
CHRNE-201ENST00000293780 NLRP1Q9C000 1473 aa21.53■■□□□ 1.04
CHRNE-201ENST00000293780 AAMPQ13685 434 aa21.53■■□□□ 1.04
CHRNE-201ENST00000293780 KIF13AQ9H1H9 1805 aa21.53■■□□□ 1.04
CHRNE-201ENST00000293780 MVPQ14764 893 aaKnown RBP21.53■■□□□ 1.04
CHRNE-201ENST00000293780 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
CHRNE-201ENST00000293780 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
CHRNE-201ENST00000293780 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.04
CHRNE-201ENST00000293780 ZKSCAN2Q63HK3 967 aa21.52■■□□□ 1.04
CHRNE-201ENST00000293780 EXOSC9Q06265 439 aaKnown RBP21.51■■□□□ 1.03
CHRNE-201ENST00000293780 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
CHRNE-201ENST00000293780 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
CHRNE-201ENST00000293780 DZIP1LQ8IYY4 767 aaKnown RBP21.5■■□□□ 1.03
CHRNE-201ENST00000293780 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
CHRNE-201ENST00000293780 ADGRB2O60241 1585 aa21.5■■□□□ 1.03
CHRNE-201ENST00000293780 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
CHRNE-201ENST00000293780 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms