RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 RXRBP28702 533 aa13.26□□□□□ -0.29
TFF1-201ENST00000291527 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
TFF1-201ENST00000291527 RPGRIP1LQ68CZ1 1315 aa13.26□□□□□ -0.29
TFF1-201ENST00000291527 SOS2Q07890 1332 aaPredicted RBP13.25□□□□□ -0.29
TFF1-201ENST00000291527 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
TFF1-201ENST00000291527 EP400Q96L91 3159 aa13.25□□□□□ -0.29
TFF1-201ENST00000291527 PRAG1Q86YV5 1406 aa13.24□□□□□ -0.29
TFF1-201ENST00000291527 QTRT2Q9H974 415 aaKnown RBP13.24□□□□□ -0.29
TFF1-201ENST00000291527 RGS12O14924 1447 aa13.23□□□□□ -0.29
TFF1-201ENST00000291527 PXDNQ92626 1479 aa13.22□□□□□ -0.29
TFF1-201ENST00000291527 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
TFF1-201ENST00000291527 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.29
TFF1-201ENST00000291527 CDC42BPGQ6DT37 1551 aa13.2□□□□□ -0.3
TFF1-201ENST00000291527 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
TFF1-201ENST00000291527 FOXO3O43524 673 aa13.2□□□□□ -0.3
TFF1-201ENST00000291527 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
TFF1-201ENST00000291527 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
TFF1-201ENST00000291527 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
TFF1-201ENST00000291527 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
TFF1-201ENST00000291527 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
TFF1-201ENST00000291527 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
TFF1-201ENST00000291527 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
TFF1-201ENST00000291527 TECPR2O15040 1411 aa13.18□□□□□ -0.3
TFF1-201ENST00000291527 MYOM2P54296 1465 aa13.17□□□□□ -0.3
TFF1-201ENST00000291527 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
TFF1-201ENST00000291527 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
TFF1-201ENST00000291527 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
TFF1-201ENST00000291527 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
TFF1-201ENST00000291527 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
TFF1-201ENST00000291527 USP21Q9UK80 565 aa13.16□□□□□ -0.3
TFF1-201ENST00000291527 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
TFF1-201ENST00000291527 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
TFF1-201ENST00000291527 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
TFF1-201ENST00000291527 ANKRD30BQ9BXX2 1392 aa13.15□□□□□ -0.3
TFF1-201ENST00000291527 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
TFF1-201ENST00000291527 ATRNO75882 1429 aa13.14□□□□□ -0.31
TFF1-201ENST00000291527 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
TFF1-201ENST00000291527 NRXN1Q9ULB1 1477 aa13.14□□□□□ -0.31
TFF1-201ENST00000291527 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
TFF1-201ENST00000291527 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
TFF1-201ENST00000291527 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
TFF1-201ENST00000291527 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
TFF1-201ENST00000291527 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
TFF1-201ENST00000291527 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
TFF1-201ENST00000291527 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
TFF1-201ENST00000291527 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
TFF1-201ENST00000291527 GLI3P10071 1580 aa13.1□□□□□ -0.31
TFF1-201ENST00000291527 ADGRB1O14514 1584 aa13.09□□□□□ -0.31
TFF1-201ENST00000291527 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
TFF1-201ENST00000291527 ABCA3Q99758 1704 aa13.09□□□□□ -0.31
TFF1-201ENST00000291527 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
TFF1-201ENST00000291527 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
TFF1-201ENST00000291527 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
TFF1-201ENST00000291527 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
TFF1-201ENST00000291527 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
TFF1-201ENST00000291527 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
TFF1-201ENST00000291527 SLIT2O94813 1529 aa13.07□□□□□ -0.32
TFF1-201ENST00000291527 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
TFF1-201ENST00000291527 DHX57Q6P158 1386 aaKnown RBP13.07□□□□□ -0.32
TFF1-201ENST00000291527 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
TFF1-201ENST00000291527 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
TFF1-201ENST00000291527 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
TFF1-201ENST00000291527 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
TFF1-201ENST00000291527 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
TFF1-201ENST00000291527 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
TFF1-201ENST00000291527 UNC5CLQ8IV45 518 aa13.04□□□□□ -0.32
TFF1-201ENST00000291527 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
TFF1-201ENST00000291527 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
TFF1-201ENST00000291527 DLC1Q96QB1 1528 aa13.03□□□□□ -0.32
TFF1-201ENST00000291527 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
TFF1-201ENST00000291527 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
TFF1-201ENST00000291527 POGKQ9P215 609 aa13.03□□□□□ -0.32
TFF1-201ENST00000291527 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
TFF1-201ENST00000291527 ADGRB2O60241 1585 aa13.02□□□□□ -0.33
TFF1-201ENST00000291527 ALS2Q96Q42 1657 aa13.02□□□□□ -0.33
TFF1-201ENST00000291527 PSME1Q06323 249 aa13.01□□□□□ -0.33
TFF1-201ENST00000291527 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
TFF1-201ENST00000291527 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
TFF1-201ENST00000291527 NRAPQ86VF7 1730 aa13□□□□□ -0.33
TFF1-201ENST00000291527 SBNO1A3KN83 1393 aa13□□□□□ -0.33
TFF1-201ENST00000291527 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
TFF1-201ENST00000291527 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
TFF1-201ENST00000291527 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
TFF1-201ENST00000291527 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
TFF1-201ENST00000291527 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
TFF1-201ENST00000291527 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
TFF1-201ENST00000291527 VPS72Q15906 364 aa12.97□□□□□ -0.33
TFF1-201ENST00000291527 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
TFF1-201ENST00000291527 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
TFF1-201ENST00000291527 HAP1P54257 671 aaPredicted RBP12.96□□□□□ -0.33
TFF1-201ENST00000291527 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
TFF1-201ENST00000291527 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
TFF1-201ENST00000291527 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
TFF1-201ENST00000291527 ATP7BP35670 1465 aa12.94□□□□□ -0.34
TFF1-201ENST00000291527 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
TFF1-201ENST00000291527 BTG4Q9NY30 223 aa12.94□□□□□ -0.34
TFF1-201ENST00000291527 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
TFF1-201ENST00000291527 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
TFF1-201ENST00000291527 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
TFF1-201ENST00000291527 CDK19Q9BWU1 502 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms