RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 RBM42Q9BTD8 480 aaKnown RBP14.37□□□□□ -0.11
CCDC58-201ENST00000291458 C19orf44Q9H6X5 657 aa14.37□□□□□ -0.11
CCDC58-201ENST00000291458 STK26Q9P289 416 aa14.37□□□□□ -0.11
CCDC58-201ENST00000291458 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
CCDC58-201ENST00000291458 ACIN1Q9UKV3 1341 aaKnown RBP14.37□□□□□ -0.11
CCDC58-201ENST00000291458 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
CCDC58-201ENST00000291458 COL16A1Q07092 1604 aaPredicted RBP14.36□□□□□ -0.11
CCDC58-201ENST00000291458 KNDC1Q76NI1 1749 aa14.35□□□□□ -0.11
CCDC58-201ENST00000291458 DCCP43146 1447 aa14.34□□□□□ -0.11
CCDC58-201ENST00000291458 MST1RQ04912 1400 aa14.34□□□□□ -0.11
CCDC58-201ENST00000291458 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
CCDC58-201ENST00000291458 LAMC1P11047 1609 aa14.33□□□□□ -0.11
CCDC58-201ENST00000291458 MYOM2P54296 1465 aa14.33□□□□□ -0.12
CCDC58-201ENST00000291458 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CCDC58-201ENST00000291458 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CCDC58-201ENST00000291458 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
CCDC58-201ENST00000291458 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.12
CCDC58-201ENST00000291458 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
CCDC58-201ENST00000291458 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
CCDC58-201ENST00000291458 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
CCDC58-201ENST00000291458 CFAP70Q5T0N1 1121 aa14.3□□□□□ -0.12
CCDC58-201ENST00000291458 DDX17Q92841 729 aaKnown RBP14.3□□□□□ -0.12
CCDC58-201ENST00000291458 PLEKHH1Q9ULM0 1364 aa14.3□□□□□ -0.12
CCDC58-201ENST00000291458 NRXN1Q9ULB1 1477 aa14.3□□□□□ -0.12
CCDC58-201ENST00000291458 LRPPRCP42704 1394 aaKnown RBP14.29□□□□□ -0.12
CCDC58-201ENST00000291458 YTHDC2Q9H6S0 1430 aaKnown RBP14.29□□□□□ -0.12
CCDC58-201ENST00000291458 CDC42BPGQ6DT37 1551 aa14.29□□□□□ -0.12
CCDC58-201ENST00000291458 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
CCDC58-201ENST00000291458 SAFB2Q14151 953 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC58-201ENST00000291458 C1orf167Q5SNV9 1468 aa14.28□□□□□ -0.12
CCDC58-201ENST00000291458 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
CCDC58-201ENST00000291458 PRAG1Q86YV5 1406 aa14.28□□□□□ -0.12
CCDC58-201ENST00000291458 DCAF11Q8TEB1 546 aa14.28□□□□□ -0.12
CCDC58-201ENST00000291458 SHPRHQ149N8 1683 aa14.27□□□□□ -0.12
CCDC58-201ENST00000291458 JCADQ9P266 1359 aa14.27□□□□□ -0.12
CCDC58-201ENST00000291458 TECPR2O15040 1411 aa14.26□□□□□ -0.13
CCDC58-201ENST00000291458 LRP6O75581 1613 aa14.26□□□□□ -0.13
CCDC58-201ENST00000291458 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
CCDC58-201ENST00000291458 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
CCDC58-201ENST00000291458 HRCP23327 699 aa14.25□□□□□ -0.13
CCDC58-201ENST00000291458 NUTM2BA6NNL0 878 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 NUTM2EB1AL46 878 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 MEX3CQ5U5Q3 659 aaKnown RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 NUTM2AQ8IVF1 878 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 ORAI2Q96SN7 254 aa14.24□□□□□ -0.13
CCDC58-201ENST00000291458 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 C14orf93Q9H972 538 aaKnown RBP14.24□□□□□ -0.13
CCDC58-201ENST00000291458 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
CCDC58-201ENST00000291458 ADGRB1O14514 1584 aa14.23□□□□□ -0.13
CCDC58-201ENST00000291458 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
CCDC58-201ENST00000291458 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
CCDC58-201ENST00000291458 FKBP8Q14318 412 aa14.22□□□□□ -0.13
CCDC58-201ENST00000291458 XPCQ01831 940 aaPredicted RBP14.21□□□□□ -0.13
CCDC58-201ENST00000291458 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
CCDC58-201ENST00000291458 TRAK1Q9UPV9 953 aa14.21□□□□□ -0.13
CCDC58-201ENST00000291458 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.14
CCDC58-201ENST00000291458 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
CCDC58-201ENST00000291458 POGKQ9P215 609 aa14.2□□□□□ -0.14
CCDC58-201ENST00000291458 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
CCDC58-201ENST00000291458 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
CCDC58-201ENST00000291458 RGS17Q9UGC6 210 aaPredicted RBP14.19□□□□□ -0.14
CCDC58-201ENST00000291458 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
CCDC58-201ENST00000291458 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
CCDC58-201ENST00000291458 SPATA31A6Q5VVP1 1343 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 MINK1Q8N4C8 1332 aaPredicted RBP14.17□□□□□ -0.14
CCDC58-201ENST00000291458 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 SOCS7O14512 581 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 AKT1S1Q96B36 256 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
CCDC58-201ENST00000291458 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
CCDC58-201ENST00000291458 ADGRB2O60241 1585 aa14.15□□□□□ -0.14
CCDC58-201ENST00000291458 FOXO3O43524 673 aa14.15□□□□□ -0.14
CCDC58-201ENST00000291458 PLEKHG5O94827 1062 aa14.15□□□□□ -0.14
CCDC58-201ENST00000291458 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
CCDC58-201ENST00000291458 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
CCDC58-201ENST00000291458 PXDNQ92626 1479 aa14.14□□□□□ -0.15
CCDC58-201ENST00000291458 KIAA1210Q9ULL0 1709 aa14.14□□□□□ -0.15
CCDC58-201ENST00000291458 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
CCDC58-201ENST00000291458 C8orf37Q96NL8 207 aa14.13□□□□□ -0.15
CCDC58-201ENST00000291458 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
CCDC58-201ENST00000291458 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
CCDC58-201ENST00000291458 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
CCDC58-201ENST00000291458 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 L3MBTL2Q969R5 705 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 COL22A1Q8NFW1 1626 aaPredicted RBP14.1□□□□□ -0.15
CCDC58-201ENST00000291458 QRICH2Q9H0J4 1663 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 AFF2P51816 1311 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
CCDC58-201ENST00000291458 TRPM1Q7Z4N2 1603 aa14.09□□□□□ -0.15
CCDC58-201ENST00000291458 SIRT1Q96EB6 747 aa14.09□□□□□ -0.15
CCDC58-201ENST00000291458 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
CCDC58-201ENST00000291458 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
CCDC58-201ENST00000291458 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
CCDC58-201ENST00000291458 LMOD2Q6P5Q4 547 aa14.08□□□□□ -0.16
CCDC58-201ENST00000291458 STAC3Q96MF2 364 aa14.07□□□□□ -0.16
CCDC58-201ENST00000291458 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
CCDC58-201ENST00000291458 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
CCDC58-201ENST00000291458 KRT28Q7Z3Y7 464 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms