RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
CHRNB3-201ENST00000289957 CPS1P31327 1500 aa15.84■□□□□ 0.13
CHRNB3-201ENST00000289957 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
CHRNB3-201ENST00000289957 TECPR2O15040 1411 aa15.84■□□□□ 0.13
CHRNB3-201ENST00000289957 STRCP1A6NGW2 1772 aa15.83■□□□□ 0.13
CHRNB3-201ENST00000289957 TMF1P82094 1093 aa15.83■□□□□ 0.13
CHRNB3-201ENST00000289957 CNGB1Q14028 1251 aaPredicted RBP15.83■□□□□ 0.13
CHRNB3-201ENST00000289957 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.83■□□□□ 0.13
CHRNB3-201ENST00000289957 CHD2O14647 1828 aaKnown RBP15.83■□□□□ 0.12
CHRNB3-201ENST00000289957 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.12
CHRNB3-201ENST00000289957 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
CHRNB3-201ENST00000289957 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
CHRNB3-201ENST00000289957 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
CHRNB3-201ENST00000289957 ZNF335Q9H4Z2 1342 aaPredicted RBP15.79■□□□□ 0.12
CHRNB3-201ENST00000289957 SBNO2Q9Y2G9 1366 aa15.79■□□□□ 0.12
CHRNB3-201ENST00000289957 MYOM1P52179 1685 aa15.78■□□□□ 0.12
CHRNB3-201ENST00000289957 CDK19Q9BWU1 502 aa15.78■□□□□ 0.12
CHRNB3-201ENST00000289957 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
CHRNB3-201ENST00000289957 FAM135BQ49AJ0 1406 aa15.78■□□□□ 0.12
CHRNB3-201ENST00000289957 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
CHRNB3-201ENST00000289957 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
CHRNB3-201ENST00000289957 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
CHRNB3-201ENST00000289957 EVC2Q86UK5 1308 aa15.75■□□□□ 0.11
CHRNB3-201ENST00000289957 TMC1Q8TDI8 760 aa15.75■□□□□ 0.11
CHRNB3-201ENST00000289957 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
CHRNB3-201ENST00000289957 PANK3Q9H999 370 aa15.74■□□□□ 0.11
CHRNB3-201ENST00000289957 PRR36Q9H6K5 1346 aa15.74■□□□□ 0.11
CHRNB3-201ENST00000289957 WASLO00401 505 aaPredicted RBP15.74■□□□□ 0.11
CHRNB3-201ENST00000289957 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
CHRNB3-201ENST00000289957 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
CHRNB3-201ENST00000289957 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
CHRNB3-201ENST00000289957 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
CHRNB3-201ENST00000289957 CARD14Q9BXL6 1004 aa15.71■□□□□ 0.11
CHRNB3-201ENST00000289957 CABP1Q9NZU7 370 aa15.7■□□□□ 0.1
CHRNB3-201ENST00000289957 RGPD8O14715 1765 aaPredicted RBP15.7■□□□□ 0.1
CHRNB3-201ENST00000289957 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
CHRNB3-201ENST00000289957 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
CHRNB3-201ENST00000289957 USP32Q8NFA0 1604 aa15.69■□□□□ 0.1
CHRNB3-201ENST00000289957 PER1O15534 1290 aaPredicted RBP15.69■□□□□ 0.1
CHRNB3-201ENST00000289957 NUDT16Q96DE0 195 aaKnown RBP15.69■□□□□ 0.1
CHRNB3-201ENST00000289957 ATP7BP35670 1465 aa15.68■□□□□ 0.1
CHRNB3-201ENST00000289957 ADGRB2O60241 1585 aa15.68■□□□□ 0.1
CHRNB3-201ENST00000289957 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
CHRNB3-201ENST00000289957 CD163L1Q9NR16 1453 aa15.67■□□□□ 0.1
CHRNB3-201ENST00000289957 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
CHRNB3-201ENST00000289957 ANP32CO43423 234 aa15.66■□□□□ 0.1
CHRNB3-201ENST00000289957 PMFBP1Q8TBY8 1022 aa15.66■□□□□ 0.1
CHRNB3-201ENST00000289957 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
CHRNB3-201ENST00000289957 CC2D1BQ5T0F9 858 aaKnown RBP15.65■□□□□ 0.1
CHRNB3-201ENST00000289957 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
CHRNB3-201ENST00000289957 NKTRP30414 1462 aaKnown RBP15.65■□□□□ 0.1
CHRNB3-201ENST00000289957 PPIP5K1Q6PFW1 1433 aa15.65■□□□□ 0.1
CHRNB3-201ENST00000289957 LRRC7Q96NW7 1537 aa15.65■□□□□ 0.1
CHRNB3-201ENST00000289957 ATAD2Q6PL18 1390 aa15.63■□□□□ 0.09
CHRNB3-201ENST00000289957 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
CHRNB3-201ENST00000289957 NSD3Q9BZ95 1437 aa15.62■□□□□ 0.09
CHRNB3-201ENST00000289957 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
CHRNB3-201ENST00000289957 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
CHRNB3-201ENST00000289957 CCDC61Q9Y6R9 512 aa15.61■□□□□ 0.09
CHRNB3-201ENST00000289957 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
CHRNB3-201ENST00000289957 CDC42BPGQ6DT37 1551 aa15.61■□□□□ 0.09
CHRNB3-201ENST00000289957 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
CHRNB3-201ENST00000289957 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
CHRNB3-201ENST00000289957 DDX17Q92841 729 aaKnown RBP15.6■□□□□ 0.09
CHRNB3-201ENST00000289957 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
CHRNB3-201ENST00000289957 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
CHRNB3-201ENST00000289957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 ANKRD36BQ8N2N9 1353 aa15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 C19orf44Q9H6X5 657 aa15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 ACEP12821 1306 aa15.59■□□□□ 0.09
CHRNB3-201ENST00000289957 XPCQ01831 940 aaPredicted RBP15.58■□□□□ 0.08
CHRNB3-201ENST00000289957 TSHZ2Q9NRE2 1034 aa15.58■□□□□ 0.08
CHRNB3-201ENST00000289957 KNSTRNQ9Y448 316 aa15.58■□□□□ 0.08
CHRNB3-201ENST00000289957 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
CHRNB3-201ENST00000289957 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
CHRNB3-201ENST00000289957 CPSF1Q10570 1443 aaKnown RBP15.56■□□□□ 0.08
CHRNB3-201ENST00000289957 FBLN1P23142 703 aa15.56■□□□□ 0.08
CHRNB3-201ENST00000289957 TNNT2P45379 298 aaPredicted RBP15.56■□□□□ 0.08
CHRNB3-201ENST00000289957 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
CHRNB3-201ENST00000289957 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
CHRNB3-201ENST00000289957 MST1RQ04912 1400 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 C1orf167Q5SNV9 1468 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 ATF3P18847 181 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 PLEKHG3A1L390 1219 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 FOXO3O43524 673 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 NME9Q86XW9 330 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
CHRNB3-201ENST00000289957 MSH6P52701 1360 aa15.53■□□□□ 0.08
CHRNB3-201ENST00000289957 AKAP12Q02952 1782 aa15.53■□□□□ 0.08
CHRNB3-201ENST00000289957 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
CHRNB3-201ENST00000289957 ITSN1Q15811 1721 aa15.53■□□□□ 0.08
CHRNB3-201ENST00000289957 FYB1O15117 783 aa15.52■□□□□ 0.08
CHRNB3-201ENST00000289957 HDGFL2Q7Z4V5 671 aaPredicted RBP15.52■□□□□ 0.08
CHRNB3-201ENST00000289957 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
CHRNB3-201ENST00000289957 NINLQ9Y2I6 1382 aa15.52■□□□□ 0.08
CHRNB3-201ENST00000289957 ANKARQ7Z5J8 1434 aa15.52■□□□□ 0.08
CHRNB3-201ENST00000289957 NEFLP07196 543 aa15.52■□□□□ 0.07
CHRNB3-201ENST00000289957 MON2Q7Z3U7 1717 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms