RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 ABCC11Q96J66 1382 aa13.26□□□□□ -0.29
LRTOMT-201ENST00000289488 RBM33Q96EV2 1170 aaKnown RBP13.25□□□□□ -0.29
LRTOMT-201ENST00000289488 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
LRTOMT-201ENST00000289488 TULP4Q9NRJ4 1543 aa13.24□□□□□ -0.29
LRTOMT-201ENST00000289488 KCNA6P17658 529 aa13.24□□□□□ -0.29
LRTOMT-201ENST00000289488 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
LRTOMT-201ENST00000289488 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
LRTOMT-201ENST00000289488 NEFLP07196 543 aa13.23□□□□□ -0.29
LRTOMT-201ENST00000289488 KNDC1Q76NI1 1749 aa13.22□□□□□ -0.29
LRTOMT-201ENST00000289488 MYOM1P52179 1685 aa13.22□□□□□ -0.29
LRTOMT-201ENST00000289488 TECPR2O15040 1411 aa13.22□□□□□ -0.29
LRTOMT-201ENST00000289488 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
LRTOMT-201ENST00000289488 DIP2AQ14689 1571 aa13.22□□□□□ -0.29
LRTOMT-201ENST00000289488 CPS1P31327 1500 aa13.21□□□□□ -0.29
LRTOMT-201ENST00000289488 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.29
LRTOMT-201ENST00000289488 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.3
LRTOMT-201ENST00000289488 PANK3Q9H999 370 aa13.21□□□□□ -0.3
LRTOMT-201ENST00000289488 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
LRTOMT-201ENST00000289488 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
LRTOMT-201ENST00000289488 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
LRTOMT-201ENST00000289488 TMC1Q8TDI8 760 aa13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 CDCA8Q53HL2 280 aa13.19□□□□□ -0.3
LRTOMT-201ENST00000289488 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
LRTOMT-201ENST00000289488 SLC24A1O60721 1099 aa13.17□□□□□ -0.3
LRTOMT-201ENST00000289488 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
LRTOMT-201ENST00000289488 ANP32CO43423 234 aa13.16□□□□□ -0.3
LRTOMT-201ENST00000289488 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
LRTOMT-201ENST00000289488 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
LRTOMT-201ENST00000289488 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
LRTOMT-201ENST00000289488 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
LRTOMT-201ENST00000289488 MSH5O43196 834 aa13.15□□□□□ -0.3
LRTOMT-201ENST00000289488 STRCP1A6NGW2 1772 aa13.15□□□□□ -0.3
LRTOMT-201ENST00000289488 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
LRTOMT-201ENST00000289488 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
LRTOMT-201ENST00000289488 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
LRTOMT-201ENST00000289488 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
LRTOMT-201ENST00000289488 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
LRTOMT-201ENST00000289488 CABP1Q9NZU7 370 aa13.13□□□□□ -0.31
LRTOMT-201ENST00000289488 RGPD8O14715 1765 aaPredicted RBP13.12□□□□□ -0.31
LRTOMT-201ENST00000289488 PRR36Q9H6K5 1346 aa13.12□□□□□ -0.31
LRTOMT-201ENST00000289488 NALCNQ8IZF0 1738 aa13.11□□□□□ -0.31
LRTOMT-201ENST00000289488 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
LRTOMT-201ENST00000289488 NUDT16Q96DE0 195 aaKnown RBP13.11□□□□□ -0.31
LRTOMT-201ENST00000289488 KNSTRNQ9Y448 316 aa13.1□□□□□ -0.31
LRTOMT-201ENST00000289488 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-201ENST00000289488 A0A1W2PP64 1363 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 C14orf37Q86TY3 774 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 ATAD2Q6PL18 1390 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 ATP7BP35670 1465 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
LRTOMT-201ENST00000289488 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.31
LRTOMT-201ENST00000289488 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.31
LRTOMT-201ENST00000289488 NWD1Q149M9 1564 aa13.08□□□□□ -0.32
LRTOMT-201ENST00000289488 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
LRTOMT-201ENST00000289488 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
LRTOMT-201ENST00000289488 USP32Q8NFA0 1604 aa13.08□□□□□ -0.32
LRTOMT-201ENST00000289488 CCDC61Q9Y6R9 512 aa13.07□□□□□ -0.32
LRTOMT-201ENST00000289488 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
LRTOMT-201ENST00000289488 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
LRTOMT-201ENST00000289488 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
LRTOMT-201ENST00000289488 TMEM94Q12767 1356 aa13.05□□□□□ -0.32
LRTOMT-201ENST00000289488 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
LRTOMT-201ENST00000289488 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
LRTOMT-201ENST00000289488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.04□□□□□ -0.32
LRTOMT-201ENST00000289488 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
LRTOMT-201ENST00000289488 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
LRTOMT-201ENST00000289488 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 TOPAZ1Q8N9V7 1692 aa13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 FMN2Q9NZ56 1722 aa13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 PARD3Q8TEW0 1356 aa13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 NINLQ9Y2I6 1382 aa13.03□□□□□ -0.32
LRTOMT-201ENST00000289488 ACEP12821 1306 aa13.02□□□□□ -0.32
LRTOMT-201ENST00000289488 CDC42BPGQ6DT37 1551 aa13.02□□□□□ -0.33
LRTOMT-201ENST00000289488 HDGFL2Q7Z4V5 671 aaPredicted RBP13.01□□□□□ -0.33
LRTOMT-201ENST00000289488 GGNBP2Q9H3C7 697 aa13.01□□□□□ -0.33
LRTOMT-201ENST00000289488 CPSF1Q10570 1443 aaKnown RBP13.01□□□□□ -0.33
LRTOMT-201ENST00000289488 ITSN1Q15811 1721 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 ORAI2Q96SN7 254 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 C19orf44Q9H6X5 657 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 MRS2Q9HD23 443 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 FYB1O15117 783 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 RALBP1Q15311 655 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 AKAP12Q02952 1782 aa13□□□□□ -0.33
LRTOMT-201ENST00000289488 ZRANB1Q9UGI0 708 aa12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 MYBBP1AQ9BQG0 1328 aaKnown RBP12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 PLEKHG3A1L390 1219 aa12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 FBLN1P23142 703 aa12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
LRTOMT-201ENST00000289488 NME9Q86XW9 330 aa12.98□□□□□ -0.33
LRTOMT-201ENST00000289488 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms