RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
HMHB1-201ENST00000289448 CFAP70Q5T0N1 1121 aa14.09□□□□□ -0.15
HMHB1-201ENST00000289448 MEX3CQ5U5Q3 659 aaKnown RBP14.09□□□□□ -0.15
HMHB1-201ENST00000289448 NRXN1Q9ULB1 1477 aa14.09□□□□□ -0.15
HMHB1-201ENST00000289448 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
HMHB1-201ENST00000289448 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
HMHB1-201ENST00000289448 HRCP23327 699 aa14.07□□□□□ -0.16
HMHB1-201ENST00000289448 SOS2Q07890 1332 aaPredicted RBP14.07□□□□□ -0.16
HMHB1-201ENST00000289448 MYOM2P54296 1465 aa14.06□□□□□ -0.16
HMHB1-201ENST00000289448 CDC42BPGQ6DT37 1551 aa14.05□□□□□ -0.16
HMHB1-201ENST00000289448 LAMC1P11047 1609 aa14.05□□□□□ -0.16
HMHB1-201ENST00000289448 NUTM2FA1L443 756 aa14.05□□□□□ -0.16
HMHB1-201ENST00000289448 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
HMHB1-201ENST00000289448 ZNF772Q68DY9 489 aaPredicted RBP14.04□□□□□ -0.16
HMHB1-201ENST00000289448 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
HMHB1-201ENST00000289448 FOXO3O43524 673 aa14.03□□□□□ -0.16
HMHB1-201ENST00000289448 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
HMHB1-201ENST00000289448 AFF2P51816 1311 aa14.03□□□□□ -0.16
HMHB1-201ENST00000289448 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
HMHB1-201ENST00000289448 DHX57Q6P158 1386 aaKnown RBP14.02□□□□□ -0.17
HMHB1-201ENST00000289448 XPCQ01831 940 aaPredicted RBP14.02□□□□□ -0.17
HMHB1-201ENST00000289448 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
HMHB1-201ENST00000289448 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
HMHB1-201ENST00000289448 C8orf37Q96NL8 207 aa14.01□□□□□ -0.17
HMHB1-201ENST00000289448 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
HMHB1-201ENST00000289448 PXDNQ92626 1479 aa14□□□□□ -0.17
HMHB1-201ENST00000289448 NPHP3Q7Z494 1330 aa14□□□□□ -0.17
HMHB1-201ENST00000289448 ADAMTS2O95450 1211 aa14□□□□□ -0.17
HMHB1-201ENST00000289448 ADGRB1O14514 1584 aa14□□□□□ -0.17
HMHB1-201ENST00000289448 RXRBP28702 533 aa13.98□□□□□ -0.17
HMHB1-201ENST00000289448 TRAK1Q9UPV9 953 aa13.97□□□□□ -0.17
HMHB1-201ENST00000289448 FMN2Q9NZ56 1722 aa13.97□□□□□ -0.17
HMHB1-201ENST00000289448 NGLY1Q96IV0 654 aa13.96□□□□□ -0.17
HMHB1-201ENST00000289448 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
HMHB1-201ENST00000289448 POGKQ9P215 609 aa13.96□□□□□ -0.17
HMHB1-201ENST00000289448 DLC1Q96QB1 1528 aa13.95□□□□□ -0.18
HMHB1-201ENST00000289448 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
HMHB1-201ENST00000289448 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
HMHB1-201ENST00000289448 STAC3Q96MF2 364 aa13.94□□□□□ -0.18
HMHB1-201ENST00000289448 HIRIP3Q9BW71 556 aaPredicted RBP13.94□□□□□ -0.18
HMHB1-201ENST00000289448 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
HMHB1-201ENST00000289448 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
HMHB1-201ENST00000289448 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
HMHB1-201ENST00000289448 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
HMHB1-201ENST00000289448 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
HMHB1-201ENST00000289448 CDK12Q9NYV4 1490 aaPredicted RBP13.92□□□□□ -0.18
HMHB1-201ENST00000289448 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
HMHB1-201ENST00000289448 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
HMHB1-201ENST00000289448 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
HMHB1-201ENST00000289448 USP21Q9UK80 565 aa13.91□□□□□ -0.18
HMHB1-201ENST00000289448 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.18
HMHB1-201ENST00000289448 RGS12O14924 1447 aa13.9□□□□□ -0.18
HMHB1-201ENST00000289448 KIF1AQ12756 1690 aa13.9□□□□□ -0.18
HMHB1-201ENST00000289448 USP32Q8NFA0 1604 aa13.9□□□□□ -0.19
HMHB1-201ENST00000289448 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.19
HMHB1-201ENST00000289448 ADGRB2O60241 1585 aa13.89□□□□□ -0.19
HMHB1-201ENST00000289448 BCL9LQ86UU0 1499 aa13.89□□□□□ -0.19
HMHB1-201ENST00000289448 WASLO00401 505 aaPredicted RBP13.88□□□□□ -0.19
HMHB1-201ENST00000289448 PSME1Q06323 249 aa13.88□□□□□ -0.19
HMHB1-201ENST00000289448 NBPF1Q3BBV0 1214 aa13.88□□□□□ -0.19
HMHB1-201ENST00000289448 CABLES1Q8TDN4 633 aa13.88□□□□□ -0.19
HMHB1-201ENST00000289448 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
HMHB1-201ENST00000289448 ATRNO75882 1429 aa13.88□□□□□ -0.19
HMHB1-201ENST00000289448 EP400Q96L91 3159 aa13.87□□□□□ -0.19
HMHB1-201ENST00000289448 TNS3Q68CZ2 1445 aa13.87□□□□□ -0.19
HMHB1-201ENST00000289448 SBNO1A3KN83 1393 aa13.86□□□□□ -0.19
HMHB1-201ENST00000289448 PLEKHG5O94827 1062 aa13.86□□□□□ -0.19
HMHB1-201ENST00000289448 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
HMHB1-201ENST00000289448 LMOD2Q6P5Q4 547 aa13.84□□□□□ -0.19
HMHB1-201ENST00000289448 SIN3AQ96ST3 1273 aa13.84□□□□□ -0.19
HMHB1-201ENST00000289448 ARHGEF28Q8N1W1 1705 aaKnown RBP13.84□□□□□ -0.19
HMHB1-201ENST00000289448 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
HMHB1-201ENST00000289448 NUDT16Q96DE0 195 aaKnown RBP13.83□□□□□ -0.2
HMHB1-201ENST00000289448 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.2
HMHB1-201ENST00000289448 SLIT2O94813 1529 aa13.83□□□□□ -0.2
HMHB1-201ENST00000289448 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
HMHB1-201ENST00000289448 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
HMHB1-201ENST00000289448 MARF1Q9Y4F3 1742 aaKnown RBP13.82□□□□□ -0.2
HMHB1-201ENST00000289448 UNC5CLQ8IV45 518 aa13.82□□□□□ -0.2
HMHB1-201ENST00000289448 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
HMHB1-201ENST00000289448 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
HMHB1-201ENST00000289448 ATP7BP35670 1465 aa13.81□□□□□ -0.2
HMHB1-201ENST00000289448 FAM83GA6ND36 823 aa13.81□□□□□ -0.2
HMHB1-201ENST00000289448 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
HMHB1-201ENST00000289448 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
HMHB1-201ENST00000289448 TRPM3Q9HCF6 1732 aaPredicted RBP13.81□□□□□ -0.2
HMHB1-201ENST00000289448 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
HMHB1-201ENST00000289448 KIAA1210Q9ULL0 1709 aa13.8□□□□□ -0.2
HMHB1-201ENST00000289448 NEUROD1Q13562 356 aa13.79□□□□□ -0.2
HMHB1-201ENST00000289448 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
HMHB1-201ENST00000289448 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
HMHB1-201ENST00000289448 GLI3P10071 1580 aa13.77□□□□□ -0.21
HMHB1-201ENST00000289448 ALS2Q96Q42 1657 aa13.77□□□□□ -0.21
HMHB1-201ENST00000289448 ABCA3Q99758 1704 aa13.77□□□□□ -0.21
HMHB1-201ENST00000289448 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
HMHB1-201ENST00000289448 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
HMHB1-201ENST00000289448 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
HMHB1-201ENST00000289448 PLEKHG3A1L390 1219 aa13.76□□□□□ -0.21
HMHB1-201ENST00000289448 VPS72Q15906 364 aa13.76□□□□□ -0.21
HMHB1-201ENST00000289448 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms