RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
KIT-201ENST00000288135 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
KIT-201ENST00000288135 THUMPD2Q9BTF0 503 aaKnown RBP10.29□□□□□ -0.76
KIT-201ENST00000288135 WASLO00401 505 aaPredicted RBP10.29□□□□□ -0.76
KIT-201ENST00000288135 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
KIT-201ENST00000288135 ZFYVE16Q7Z3T8 1539 aa10.29□□□□□ -0.76
KIT-201ENST00000288135 NEO1Q92859 1461 aa10.29□□□□□ -0.76
KIT-201ENST00000288135 RIMS2Q9UQ26 1411 aa10.29□□□□□ -0.76
KIT-201ENST00000288135 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
KIT-201ENST00000288135 BCAR3O75815 825 aa10.28□□□□□ -0.76
KIT-201ENST00000288135 UHRF1BP1Q6BDS2 1440 aa10.28□□□□□ -0.76
KIT-201ENST00000288135 FOXO3O43524 673 aa10.28□□□□□ -0.76
KIT-201ENST00000288135 ATF3P18847 181 aa10.28□□□□□ -0.76
KIT-201ENST00000288135 E9PSI1 815 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 PANK1Q8TE04 598 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 TSHZ2Q9NRE2 1034 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 LTKP29376 864 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 SULT6B1Q6IMI4 303 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 SLC4A10Q6U841 1118 aa10.27□□□□□ -0.77
KIT-201ENST00000288135 ZNF330Q9Y3S2 320 aaPredicted RBP10.27□□□□□ -0.77
KIT-201ENST00000288135 ZNF428Q96B54 188 aa10.26□□□□□ -0.77
KIT-201ENST00000288135 NBR1Q14596 966 aa10.26□□□□□ -0.77
KIT-201ENST00000288135 PPP6R1Q9UPN7 881 aa10.26□□□□□ -0.77
KIT-201ENST00000288135 RBM19Q9Y4C8 960 aaKnown RBP10.26□□□□□ -0.77
KIT-201ENST00000288135 PRDM15P57071 1507 aaPredicted RBP10.26□□□□□ -0.77
KIT-201ENST00000288135 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
KIT-201ENST00000288135 ATAD2Q6PL18 1390 aa10.25□□□□□ -0.77
KIT-201ENST00000288135 DCTN1Q14203 1278 aa10.25□□□□□ -0.77
KIT-201ENST00000288135 FYB1O15117 783 aa10.25□□□□□ -0.77
KIT-201ENST00000288135 SKAP1Q86WV1 359 aa10.24□□□□□ -0.77
KIT-201ENST00000288135 KCNA6P17658 529 aa10.24□□□□□ -0.77
KIT-201ENST00000288135 ZC3H6P61129 1189 aaKnown RBP10.24□□□□□ -0.77
KIT-201ENST00000288135 MLH3Q9UHC1 1453 aa10.24□□□□□ -0.77
KIT-201ENST00000288135 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
KIT-201ENST00000288135 PLEKHH1Q9ULM0 1364 aa10.23□□□□□ -0.77
KIT-201ENST00000288135 EXOSC9Q06265 439 aaKnown RBP10.23□□□□□ -0.77
KIT-201ENST00000288135 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
KIT-201ENST00000288135 ACEP12821 1306 aa10.23□□□□□ -0.77
KIT-201ENST00000288135 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
KIT-201ENST00000288135 EIF2S2P20042 333 aaKnown RBP10.22□□□□□ -0.77
KIT-201ENST00000288135 MIS18AQ9NYP9 233 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 NLRP2Q9NX02 1062 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 RIMBP3CA6NJZ7 1639 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 RIMBP3BA6NNM3 1639 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 RIMBP3Q9UFD9 1639 aa10.22□□□□□ -0.77
KIT-201ENST00000288135 WWC1Q8IX03 1113 aa10.21□□□□□ -0.77
KIT-201ENST00000288135 NGEFQ8N5V2 710 aa10.21□□□□□ -0.77
KIT-201ENST00000288135 ZNF692Q9BU19 519 aaPredicted RBP10.21□□□□□ -0.77
KIT-201ENST00000288135 YTHDC2Q9H6S0 1430 aaKnown RBP10.21□□□□□ -0.78
KIT-201ENST00000288135 UPF2Q9HAU5 1272 aaKnown RBP10.2□□□□□ -0.78
KIT-201ENST00000288135 HECW2Q9P2P5 1572 aa10.2□□□□□ -0.78
KIT-201ENST00000288135 COL17A1Q9UMD9 1497 aaPredicted RBP10.2□□□□□ -0.78
KIT-201ENST00000288135 CROCC2H7BZ55 1655 aa10.2□□□□□ -0.78
KIT-201ENST00000288135 A0A1W2PP64 1363 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 PARD3Q8TEW0 1356 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 ABCA9Q8IUA7 1624 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 IPO8O15397 1037 aaKnown RBP10.19□□□□□ -0.78
KIT-201ENST00000288135 GPRASP1Q5JY77 1395 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
KIT-201ENST00000288135 HSP90AB2PQ58FF8 381 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 FAM83GA6ND36 823 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 TMPOP42166 694 aaKnown RBP10.19□□□□□ -0.78
KIT-201ENST00000288135 MCM10Q7L590 875 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 PHF8Q9UPP1 1060 aa10.19□□□□□ -0.78
KIT-201ENST00000288135 METP08581 1390 aa10.18□□□□□ -0.78
KIT-201ENST00000288135 PTPRTO14522 1441 aa10.18□□□□□ -0.78
KIT-201ENST00000288135 EVA1CP58658 441 aa10.18□□□□□ -0.78
KIT-201ENST00000288135 ZKSCAN2Q63HK3 967 aa10.18□□□□□ -0.78
KIT-201ENST00000288135 STK31Q9BXU1 1019 aa10.18□□□□□ -0.78
KIT-201ENST00000288135 LMOD3Q0VAK6 560 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 STRN4Q9NRL3 753 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 PLXNC1O60486 1568 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 TEFQ10587 303 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 AEBP1Q8IUX7 1158 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 PPIP5K1Q6PFW1 1433 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
KIT-201ENST00000288135 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 SLFN5Q08AF3 891 aa10.17□□□□□ -0.78
KIT-201ENST00000288135 DDX17Q92841 729 aaKnown RBP10.17□□□□□ -0.78
KIT-201ENST00000288135 SPINK5Q9NQ38 1064 aaPredicted RBP10.17□□□□□ -0.78
KIT-201ENST00000288135 ABCC3O15438 1527 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 TRPM2O94759 1503 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 CLTCL1P53675 1640 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 C1orf141Q5JVX7 400 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 DMRT2Q9Y5R5 561 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 ANKRD36BQ8N2N9 1353 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 MAGI2Q86UL8 1455 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 MS4A1P11836 297 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 OS9Q13438 667 aaPredicted RBP10.16□□□□□ -0.78
KIT-201ENST00000288135 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
KIT-201ENST00000288135 ERICH6BQ5W0A0 696 aa10.15□□□□□ -0.78
KIT-201ENST00000288135 POLKQ9UBT6 870 aa10.15□□□□□ -0.78
KIT-201ENST00000288135 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.78
KIT-201ENST00000288135 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
KIT-201ENST00000288135 CABLES1Q8TDN4 633 aa10.15□□□□□ -0.78
KIT-201ENST00000288135 KDM5CP41229 1560 aa10.15□□□□□ -0.78
KIT-201ENST00000288135 ASXL1Q8IXJ9 1541 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms