RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
MSI2-201ENST00000284073 API5Q9BZZ5 524 aaKnown RBP19.04■□□□□ 0.64
MSI2-201ENST00000284073 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.647e-7■■■■□ 25.9
MSI2-201ENST00000284073 ZSCAN30Q86W11 494 aa19.04■□□□□ 0.64
MSI2-201ENST00000284073 AMPHP49418 695 aa19.03■□□□□ 0.64
MSI2-201ENST00000284073 ADAMTS8Q9UP79 889 aa19.03■□□□□ 0.64
MSI2-201ENST00000284073 NUTM2FA1L443 756 aa19.02■□□□□ 0.64
MSI2-201ENST00000284073 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
MSI2-201ENST00000284073 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.02■□□□□ 0.64
MSI2-201ENST00000284073 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
MSI2-201ENST00000284073 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
MSI2-201ENST00000284073 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
MSI2-201ENST00000284073 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
MSI2-201ENST00000284073 RUNDC1Q96C34 613 aa19■□□□□ 0.63
MSI2-201ENST00000284073 FAM177A1Q8N128 213 aaPredicted RBP19■□□□□ 0.63
MSI2-201ENST00000284073 DCTN1Q14203 1278 aa19■□□□□ 0.63
MSI2-201ENST00000284073 C9orf78Q9NZ63 289 aaPredicted RBP19■□□□□ 0.63
MSI2-201ENST00000284073 CGNQ9P2M7 1197 aaKnown RBP18.99■□□□□ 0.63
MSI2-201ENST00000284073 PDCL3Q9H2J4 239 aa18.99■□□□□ 0.63
MSI2-201ENST00000284073 KDM4AO75164 1064 aa18.98■□□□□ 0.63
MSI2-201ENST00000284073 CEBPZQ03701 1054 aaKnown RBP18.98■□□□□ 0.63
MSI2-201ENST00000284073 CT47B1P0C2W7 299 aaPredicted RBP18.98■□□□□ 0.63
MSI2-201ENST00000284073 RABEP1Q15276 862 aa18.98■□□□□ 0.63
MSI2-201ENST00000284073 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
MSI2-201ENST00000284073 XPCQ01831 940 aaPredicted RBP18.98■□□□□ 0.63
MSI2-201ENST00000284073 CCDC47Q96A33 483 aaKnown RBP18.97■□□□□ 0.63
MSI2-201ENST00000284073 NGEFQ8N5V2 710 aa18.97■□□□□ 0.63
MSI2-201ENST00000284073 KINO60870 393 aaKnown RBP18.97■□□□□ 0.63
MSI2-201ENST00000284073 BCAR3O75815 825 aa18.97■□□□□ 0.63
MSI2-201ENST00000284073 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
MSI2-201ENST00000284073 TAF3Q5VWG9 929 aa18.97■□□□□ 0.63
MSI2-201ENST00000284073 SKAP1Q86WV1 359 aa18.97■□□□□ 0.63
MSI2-201ENST00000284073 FKBP5Q13451 457 aaPredicted RBP18.96■□□□□ 0.63
MSI2-201ENST00000284073 NFXL1Q6ZNB6 911 aa18.96■□□□□ 0.63
MSI2-201ENST00000284073 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
MSI2-201ENST00000284073 KIF3BO15066 747 aa18.96■□□□□ 0.63
MSI2-201ENST00000284073 DEF6Q9H4E7 631 aa18.96■□□□□ 0.63
MSI2-201ENST00000284073 CCDC192P0DO97 292 aa18.95■□□□□ 0.62
MSI2-201ENST00000284073 AAMPQ13685 434 aa18.95■□□□□ 0.62
MSI2-201ENST00000284073 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
MSI2-201ENST00000284073 KIAA0754O94854 1291 aa18.95■□□□□ 0.62
MSI2-201ENST00000284073 BRPF1P55201 1214 aaPredicted RBP18.95■□□□□ 0.62
MSI2-201ENST00000284073 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
MSI2-201ENST00000284073 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
MSI2-201ENST00000284073 CCP110O43303 1012 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 TRDNQ13061 729 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 CCDC184Q52MB2 194 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 ROCK1Q13464 1354 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 SYCE3A1L190 88 aa18.93■□□□□ 0.62
MSI2-201ENST00000284073 NGDNQ8NEJ9 315 aaKnown RBP18.92■□□□□ 0.62
MSI2-201ENST00000284073 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
MSI2-201ENST00000284073 TNMDQ9H2S6 317 aa18.91■□□□□ 0.62
MSI2-201ENST00000284073 FAM193AP78312 1265 aa18.91■□□□□ 0.62
MSI2-201ENST00000284073 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
MSI2-201ENST00000284073 CENPHQ9H3R5 247 aa18.91■□□□□ 0.62
MSI2-201ENST00000284073 CWC22Q9HCG8 908 aaKnown RBP18.91■□□□□ 0.62
MSI2-201ENST00000284073 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
MSI2-201ENST00000284073 SERPINC1P01008 464 aa18.89■□□□□ 0.62
MSI2-201ENST00000284073 SAFBQ15424 915 aaKnown RBP eCLIP18.89■□□□□ 0.62
MSI2-201ENST00000284073 FILIP1Q7Z7B0 1213 aa18.89■□□□□ 0.62
MSI2-201ENST00000284073 ERC2O15083 957 aa18.89■□□□□ 0.61
MSI2-201ENST00000284073 MCM2P49736 904 aa18.89■□□□□ 0.61
MSI2-201ENST00000284073 CCDC102AQ96A19 550 aa18.88■□□□□ 0.61
MSI2-201ENST00000284073 HMOX1P09601 288 aa18.88■□□□□ 0.61
MSI2-201ENST00000284073 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
MSI2-201ENST00000284073 SPDYE4A6NLX3 237 aa18.88■□□□□ 0.61
MSI2-201ENST00000284073 COG3Q96JB2 828 aa18.88■□□□□ 0.61
MSI2-201ENST00000284073 OFD1O75665 1012 aa18.87■□□□□ 0.61
MSI2-201ENST00000284073 EIF3JO75822 258 aaKnown RBP18.87■□□□□ 0.61
MSI2-201ENST00000284073 ATP2B1P20020 1258 aa18.87■□□□□ 0.61
MSI2-201ENST00000284073 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
MSI2-201ENST00000284073 PSMA5P28066 241 aa18.86■□□□□ 0.61
MSI2-201ENST00000284073 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
MSI2-201ENST00000284073 ERLIN1O75477 346 aa18.86■□□□□ 0.61
MSI2-201ENST00000284073 PDE3AQ14432 1141 aa18.86■□□□□ 0.61
MSI2-201ENST00000284073 PPP4R3BQ5MIZ7 849 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 USP8P40818 1118 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 TEFQ10587 303 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 RAD21O60216 631 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 WDR33Q9C0J8 1336 aaKnown RBP18.85■□□□□ 0.61
MSI2-201ENST00000284073 GNAI1P63096 354 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
MSI2-201ENST00000284073 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
MSI2-201ENST00000284073 PDCP20941 246 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 CT47A1Q5JQC4 288 aaPredicted RBP18.84■□□□□ 0.61
MSI2-201ENST00000284073 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
MSI2-201ENST00000284073 GPATCH11Q8N954 259 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 CIZ1Q9ULV3 898 aaPredicted RBP18.84■□□□□ 0.61
MSI2-201ENST00000284073 HSP90AB2PQ58FF8 381 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 UBXN4Q92575 508 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 EXOSC9Q06265 439 aaKnown RBP18.84■□□□□ 0.61
MSI2-201ENST00000284073 STK3Q13188 491 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 EVC2Q86UK5 1308 aa18.84■□□□□ 0.61
MSI2-201ENST00000284073 DHX16O60231 1041 aaKnown RBP18.83■□□□□ 0.61
MSI2-201ENST00000284073 POLR3GO15318 223 aaPredicted RBP18.83■□□□□ 0.6
MSI2-201ENST00000284073 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1168.2 ms