RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
PTPRR-201ENST00000283228 CDK11BP21127 795 aaKnown RBP14.13□□□□□ -0.15
PTPRR-201ENST00000283228 DZIP1LQ8IYY4 767 aaKnown RBP14.13□□□□□ -0.15
PTPRR-201ENST00000283228 MBD5Q9P267 1494 aa14.13□□□□□ -0.15
PTPRR-201ENST00000283228 DYNC1I1O14576 645 aa14.12□□□□□ -0.15
PTPRR-201ENST00000283228 RBSNQ9H1K0 784 aa14.12□□□□□ -0.15
PTPRR-201ENST00000283228 SASS6Q6UVJ0 657 aa14.12□□□□□ -0.15
PTPRR-201ENST00000283228 BAG4O95429 457 aaKnown RBP14.12□□□□□ -0.15
PTPRR-201ENST00000283228 ZKSCAN2Q63HK3 967 aa14.12□□□□□ -0.15
PTPRR-201ENST00000283228 PRIM1P49642 420 aaKnown RBP14.11□□□□□ -0.15
PTPRR-201ENST00000283228 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
PTPRR-201ENST00000283228 NLRP1Q9C000 1473 aa14.11□□□□□ -0.15
PTPRR-201ENST00000283228 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
PTPRR-201ENST00000283228 CARMIL2Q6F5E8 1435 aa14.11□□□□□ -0.15
PTPRR-201ENST00000283228 K7ELQ4 463 aaPredicted RBP14.11□□□□□ -0.15
PTPRR-201ENST00000283228 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
PTPRR-201ENST00000283228 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
PTPRR-201ENST00000283228 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
PTPRR-201ENST00000283228 ZSCAN23Q3MJ62 389 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 ANKRD45Q5TZF3 282 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 SYCE3A1L190 88 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 NOL7Q9UMY1 257 aaKnown RBP14.1□□□□□ -0.15
PTPRR-201ENST00000283228 CD2BP2O95400 341 aaKnown RBP14.1□□□□□ -0.15
PTPRR-201ENST00000283228 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
PTPRR-201ENST00000283228 KLHL40Q2TBA0 621 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 TCP11L2Q8N4U5 519 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 ZKSCAN5Q9Y2L8 839 aa14.1□□□□□ -0.15
PTPRR-201ENST00000283228 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
PTPRR-201ENST00000283228 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
PTPRR-201ENST00000283228 CCDC94Q9BW85 323 aaPredicted RBP14.09□□□□□ -0.15
PTPRR-201ENST00000283228 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
PTPRR-201ENST00000283228 CAMSAP2Q08AD1 1489 aa14.09□□□□□ -0.15
PTPRR-201ENST00000283228 SMC5Q8IY18 1101 aa14.09□□□□□ -0.15
PTPRR-201ENST00000283228 ZNF830Q96NB3 372 aaPredicted RBP14.09□□□□□ -0.15
PTPRR-201ENST00000283228 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
PTPRR-201ENST00000283228 RAPGEF6Q8TEU7 1601 aa14.08□□□□□ -0.15
PTPRR-201ENST00000283228 VGLL3A8MV65 326 aa14.08□□□□□ -0.15
PTPRR-201ENST00000283228 KIAA2012Q0VF49 1180 aa14.08□□□□□ -0.15
PTPRR-201ENST00000283228 ZNF771Q7L3S4 317 aaPredicted RBP14.08□□□□□ -0.15
PTPRR-201ENST00000283228 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.15
PTPRR-201ENST00000283228 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.15
PTPRR-201ENST00000283228 UHRF1BP1Q6BDS2 1440 aa14.08□□□□□ -0.15
PTPRR-201ENST00000283228 PPP4R3BQ5MIZ7 849 aa14.08□□□□□ -0.16
PTPRR-201ENST00000283228 TRMT2AQ8IZ69 625 aaKnown RBP14.08□□□□□ -0.16
PTPRR-201ENST00000283228 CHAMP1Q96JM3 812 aa14.08□□□□□ -0.16
PTPRR-201ENST00000283228 CHMP4BQ9H444 224 aaKnown RBP14.08□□□□□ -0.16
PTPRR-201ENST00000283228 MORC1Q86VD1 984 aa14.07□□□□□ -0.16
PTPRR-201ENST00000283228 NOL8Q76FK4 1167 aaKnown RBP14.06□□□□□ -0.16
PTPRR-201ENST00000283228 CGNQ9P2M7 1197 aaKnown RBP14.06□□□□□ -0.16
PTPRR-201ENST00000283228 GPATCH8Q9UKJ3 1502 aaKnown RBP14.06□□□□□ -0.16
PTPRR-201ENST00000283228 TERF1P54274 439 aa14.06□□□□□ -0.16
PTPRR-201ENST00000283228 U2AF1L5P0DN76 240 aaPredicted RBP14.05□□□□□ -0.16
PTPRR-201ENST00000283228 U2AF1Q01081 240 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTPRR-201ENST00000283228 DMTNQ08495 405 aa14.05□□□□□ -0.16
PTPRR-201ENST00000283228 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
PTPRR-201ENST00000283228 APBB1O00213 710 aa14.05□□□□□ -0.16
PTPRR-201ENST00000283228 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
PTPRR-201ENST00000283228 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
PTPRR-201ENST00000283228 MAGI1Q96QZ7 1491 aaPredicted RBP14.04□□□□□ -0.16
PTPRR-201ENST00000283228 C1orf115Q9H7X2 142 aa14.04□□□□□ -0.16
PTPRR-201ENST00000283228 NINLQ9Y2I6 1382 aa14.04□□□□□ -0.16
PTPRR-201ENST00000283228 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
PTPRR-201ENST00000283228 ZNF500O60304 480 aaPredicted RBP14.03□□□□□ -0.16
PTPRR-201ENST00000283228 SNX21Q969T3 373 aa14.03□□□□□ -0.16
PTPRR-201ENST00000283228 PTPRGP23470 1445 aa14.03□□□□□ -0.16
PTPRR-201ENST00000283228 PKP1Q13835 747 aa14.03□□□□□ -0.16
PTPRR-201ENST00000283228 DDX19BQ9UMR2 479 aa14.02□□□□□ -0.16
PTPRR-201ENST00000283228 NUCB2P80303 420 aa14.02□□□□□ -0.17
PTPRR-201ENST00000283228 COL17A1Q9UMD9 1497 aaPredicted RBP14.01□□□□□ -0.17
PTPRR-201ENST00000283228 INSRP06213 1382 aa14.01□□□□□ -0.17
PTPRR-201ENST00000283228 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
PTPRR-201ENST00000283228 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
PTPRR-201ENST00000283228 NAP1L2Q9ULW6 460 aaPredicted RBP14.01□□□□□ -0.17
PTPRR-201ENST00000283228 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
PTPRR-201ENST00000283228 PRAG1Q86YV5 1406 aa14.01□□□□□ -0.17
PTPRR-201ENST00000283228 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
PTPRR-201ENST00000283228 ATP10BO94823 1461 aa14□□□□□ -0.17
PTPRR-201ENST00000283228 CHAF1AQ13111 956 aaPredicted RBP14□□□□□ -0.17
PTPRR-201ENST00000283228 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
PTPRR-201ENST00000283228 RBM25P49756 843 aaKnown RBP14□□□□□ -0.17
PTPRR-201ENST00000283228 HS1BP3Q53T59 392 aa14□□□□□ -0.17
PTPRR-201ENST00000283228 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
PTPRR-201ENST00000283228 NOB1Q9ULX3 412 aaKnown RBP14□□□□□ -0.17
PTPRR-201ENST00000283228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14□□□□□ -0.17
PTPRR-201ENST00000283228 TRIM27P14373 513 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 CHD1LQ86WJ1 897 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 KIF3AQ9Y496 699 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
PTPRR-201ENST00000283228 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
PTPRR-201ENST00000283228 ZNF445P59923 1031 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 TBC1D9Q6ZT07 1266 aa13.99□□□□□ -0.17
PTPRR-201ENST00000283228 CFAP53Q96M91 514 aa13.98□□□□□ -0.17
PTPRR-201ENST00000283228 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
PTPRR-201ENST00000283228 ZBTB22O15209 634 aa13.98□□□□□ -0.17
PTPRR-201ENST00000283228 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
PTPRR-201ENST00000283228 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
PTPRR-201ENST00000283228 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
PTPRR-201ENST00000283228 LMBRD1Q9NUN5 540 aa13.97□□□□□ -0.17
PTPRR-201ENST00000283228 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms