RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 YTHDC2Q9H6S0 1430 aaKnown RBP10.12□□□□□ -0.79
EPHA4-201ENST00000281821 UNC13BO14795 1591 aa10.12□□□□□ -0.79
EPHA4-201ENST00000281821 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
EPHA4-201ENST00000281821 ABTB2Q8N961 1025 aa10.12□□□□□ -0.79
EPHA4-201ENST00000281821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.11□□□□□ -0.79
EPHA4-201ENST00000281821 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
EPHA4-201ENST00000281821 IQGAP3Q86VI3 1631 aa10.1□□□□□ -0.79
EPHA4-201ENST00000281821 HSP90AB1P08238 724 aaKnown RBP10.1□□□□□ -0.79
EPHA4-201ENST00000281821 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
EPHA4-201ENST00000281821 C1orf141Q5JVX7 400 aa10.09□□□□□ -0.79
EPHA4-201ENST00000281821 FAM135BQ49AJ0 1406 aa10.09□□□□□ -0.79
EPHA4-201ENST00000281821 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
EPHA4-201ENST00000281821 LRRC59Q96AG4 307 aaKnown RBP10.09□□□□□ -0.79
EPHA4-201ENST00000281821 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
EPHA4-201ENST00000281821 PRDM11Q9NQV5 511 aa10.09□□□□□ -0.79
EPHA4-201ENST00000281821 TSPOAP1O95153 1857 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 UBAP1LF5GYI3 381 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 CDC42BPBQ9Y5S2 1711 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 SPATA31E1Q6ZUB1 1445 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-201ENST00000281821 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
EPHA4-201ENST00000281821 TNNT2P45379 298 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-201ENST00000281821 PIK3C2GO75747 1445 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 GAS2L2Q8NHY3 880 aa10.08□□□□□ -0.8
EPHA4-201ENST00000281821 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-201ENST00000281821 LMTK3Q96Q04 1460 aa10.07□□□□□ -0.8
EPHA4-201ENST00000281821 ARHGEF10O15013 1369 aa10.07□□□□□ -0.8
EPHA4-201ENST00000281821 NCOA3Q9Y6Q9 1424 aa10.07□□□□□ -0.8
EPHA4-201ENST00000281821 PLEKHO1Q53GL0 409 aaPredicted RBP10.06□□□□□ -0.8
EPHA4-201ENST00000281821 ANKRD36BQ8N2N9 1353 aa10.06□□□□□ -0.8
EPHA4-201ENST00000281821 TTC21BQ7Z4L5 1316 aa10.06□□□□□ -0.8
EPHA4-201ENST00000281821 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
EPHA4-201ENST00000281821 SOX12O15370 315 aa10.06□□□□□ -0.8
EPHA4-201ENST00000281821 HSPA2P54652 639 aa10.05□□□□□ -0.8
EPHA4-201ENST00000281821 PNISRQ8TF01 805 aaKnown RBP10.05□□□□□ -0.8
EPHA4-201ENST00000281821 PTPRMP28827 1452 aa10.05□□□□□ -0.8
EPHA4-201ENST00000281821 SYNMO15061 1565 aa10.05□□□□□ -0.8
EPHA4-201ENST00000281821 TEFQ10587 303 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 PHF23Q9BUL5 403 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-201ENST00000281821 PLEKHG5O94827 1062 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-201ENST00000281821 CDCA7Q9BWT1 371 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-201ENST00000281821 STK31Q9BXU1 1019 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 CROCC2H7BZ55 1655 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 ADGRB3O60242 1522 aa10.04□□□□□ -0.8
EPHA4-201ENST00000281821 PLEKHG3A1L390 1219 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 RNF17Q9BXT8 1623 aaKnown RBP10.03□□□□□ -0.8
EPHA4-201ENST00000281821 NPC1L1Q9UHC9 1359 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 SLC12A5Q9H2X9 1139 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 SPG7Q9UQ90 795 aa10.03□□□□□ -0.8
EPHA4-201ENST00000281821 ANKARQ7Z5J8 1434 aa10.02□□□□□ -0.81
EPHA4-201ENST00000281821 HSP90B1P14625 803 aaKnown RBP10.02□□□□□ -0.81
EPHA4-201ENST00000281821 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
EPHA4-201ENST00000281821 GTF3C3Q9Y5Q9 886 aa10.02□□□□□ -0.81
EPHA4-201ENST00000281821 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
EPHA4-201ENST00000281821 AMOTQ4VCS5 1084 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 LTKP29376 864 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 GOLGA2Q08379 1002 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
EPHA4-201ENST00000281821 TTC5Q8N0Z6 440 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 RUNDC1Q96C34 613 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 MIER1Q8N108 512 aa10.01□□□□□ -0.81
EPHA4-201ENST00000281821 GGNBP2Q9H3C7 697 aa10□□□□□ -0.81
EPHA4-201ENST00000281821 ABCA6Q8N139 1617 aa10□□□□□ -0.81
EPHA4-201ENST00000281821 SETD1BQ9UPS6 1966 aaKnown RBP10□□□□□ -0.81
EPHA4-201ENST00000281821 GNAI1P63096 354 aa10□□□□□ -0.81
EPHA4-201ENST00000281821 KIDINS220Q9ULH0 1771 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 FOXO3O43524 673 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 FCHSD2O94868 740 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 SLAIN2Q9P270 581 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 ACEP12821 1306 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 NSD3Q9BZ95 1437 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 CFAP44Q96MT7 982 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-201ENST00000281821 TMEM94Q12767 1356 aa9.99□□□□□ -0.81
EPHA4-201ENST00000281821 NKTRP30414 1462 aaKnown RBP9.98□□□□□ -0.81
EPHA4-201ENST00000281821 SF3B2Q13435 895 aaKnown RBP9.98□□□□□ -0.81
EPHA4-201ENST00000281821 ZNF428Q96B54 188 aa9.98□□□□□ -0.81
EPHA4-201ENST00000281821 E9PSI1 815 aa9.98□□□□□ -0.81
EPHA4-201ENST00000281821 FTSJ3Q8IY81 847 aaKnown RBP9.98□□□□□ -0.81
EPHA4-201ENST00000281821 PPIP5K1Q6PFW1 1433 aa9.98□□□□□ -0.81
EPHA4-201ENST00000281821 CT47B1P0C2W7 299 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-201ENST00000281821 LTV1Q96GA3 475 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-201ENST00000281821 PIP4K2BP78356 416 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 AAMPQ13685 434 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 TMX4Q9H1E5 349 aaPredicted RBP9.97□□□□□ -0.81
EPHA4-201ENST00000281821 NEUROD2Q15784 382 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 NGLY1Q96IV0 654 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 VWDEQ8N2E2 1590 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 PTCH1Q13635 1447 aa9.97□□□□□ -0.81
EPHA4-201ENST00000281821 EDC4Q6P2E9 1401 aaKnown RBP9.97□□□□□ -0.81
EPHA4-201ENST00000281821 KIF24Q5T7B8 1368 aa9.96□□□□□ -0.81
EPHA4-201ENST00000281821 PPP2R1AP30153 589 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms