RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 ERVK-7P63135 1459 aa9.75□□□□□ -0.85
TRIM6-201ENST00000278302 ABCA6Q8N139 1617 aa9.75□□□□□ -0.85
TRIM6-201ENST00000278302 KIDINS220Q9ULH0 1771 aa9.75□□□□□ -0.85
TRIM6-201ENST00000278302 GOLGA6L3A6NEY3 463 aa9.74□□□□□ -0.85
TRIM6-201ENST00000278302 TMEM132EQ6IEE7 984 aa9.74□□□□□ -0.85
TRIM6-201ENST00000278302 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
TRIM6-201ENST00000278302 TNNT2P45379 298 aaPredicted RBP9.74□□□□□ -0.85
TRIM6-201ENST00000278302 SLFN5Q08AF3 891 aa9.74□□□□□ -0.85
TRIM6-201ENST00000278302 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
TRIM6-201ENST00000278302 MYOM1P52179 1685 aa9.74□□□□□ -0.85
TRIM6-201ENST00000278302 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
TRIM6-201ENST00000278302 PPRC1Q5VV67 1664 aaKnown RBP9.73□□□□□ -0.85
TRIM6-201ENST00000278302 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
TRIM6-201ENST00000278302 NUTM2DQ5VT03 806 aaPredicted RBP9.73□□□□□ -0.85
TRIM6-201ENST00000278302 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
TRIM6-201ENST00000278302 KDM2BQ8NHM5 1336 aa9.73□□□□□ -0.85
TRIM6-201ENST00000278302 ZNF521Q96K83 1311 aa9.72□□□□□ -0.85
TRIM6-201ENST00000278302 C14orf93Q9H972 538 aaKnown RBP9.72□□□□□ -0.85
TRIM6-201ENST00000278302 SLC12A5Q9H2X9 1139 aa9.72□□□□□ -0.85
TRIM6-201ENST00000278302 MROH2AA6NES4 1674 aa9.72□□□□□ -0.85
TRIM6-201ENST00000278302 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.85
TRIM6-201ENST00000278302 RAPGEF3O95398 923 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 SEC24BO95487 1268 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 AAMPQ13685 434 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 NPATQ14207 1427 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 POGZQ7Z3K3 1410 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 E9PSI1 815 aa9.71□□□□□ -0.86
TRIM6-201ENST00000278302 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.86
TRIM6-201ENST00000278302 RPGRIP1LQ68CZ1 1315 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 SENP3Q9H4L4 574 aaPredicted RBP9.7□□□□□ -0.86
TRIM6-201ENST00000278302 ESPNB1AK53 854 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 ARID3AQ99856 593 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
TRIM6-201ENST00000278302 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
TRIM6-201ENST00000278302 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
TRIM6-201ENST00000278302 SBNO2Q9Y2G9 1366 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 MLH3Q9UHC1 1453 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 ADGRB3O60242 1522 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 USP19O94966 1318 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 TRMT2AQ8IZ69 625 aaKnown RBP9.69□□□□□ -0.86
TRIM6-201ENST00000278302 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
TRIM6-201ENST00000278302 FSD2A1L4K1 749 aa9.68□□□□□ -0.86
TRIM6-201ENST00000278302 BCAR3O75815 825 aa9.68□□□□□ -0.86
TRIM6-201ENST00000278302 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
TRIM6-201ENST00000278302 NKTRP30414 1462 aaKnown RBP9.68□□□□□ -0.86
TRIM6-201ENST00000278302 SAFB2Q14151 953 aaKnown RBP eCLIP9.68□□□□□ -0.86
TRIM6-201ENST00000278302 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 EVC2Q86UK5 1308 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 POLR3AO14802 1390 aaPredicted RBP9.67□□□□□ -0.86
TRIM6-201ENST00000278302 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 CGNL1Q0VF96 1302 aa9.67□□□□□ -0.86
TRIM6-201ENST00000278302 RRP7AQ9Y3A4 280 aaKnown RBP9.67□□□□□ -0.86
TRIM6-201ENST00000278302 MYO3AQ8NEV4 1616 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 BECN1Q14457 450 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 RUNDC1Q96C34 613 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 ANTXR1Q9H6X2 564 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 STK26Q9P289 416 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 DMRT2Q9Y5R5 561 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 FRMPD1Q5SYB0 1578 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 MTHFSP49914 203 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 FGD1P98174 961 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 PPLO60437 1756 aa9.66□□□□□ -0.86
TRIM6-201ENST00000278302 CALD1Q05682 793 aaKnown RBP9.65□□□□□ -0.86
TRIM6-201ENST00000278302 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
TRIM6-201ENST00000278302 ABCC3O15438 1527 aa9.65□□□□□ -0.86
TRIM6-201ENST00000278302 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
TRIM6-201ENST00000278302 QRICH2Q9H0J4 1663 aa9.65□□□□□ -0.86
TRIM6-201ENST00000278302 IDI1Q13907 227 aa9.65□□□□□ -0.87
TRIM6-201ENST00000278302 TRIM44Q96DX7 344 aaPredicted RBP9.65□□□□□ -0.87
TRIM6-201ENST00000278302 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
TRIM6-201ENST00000278302 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
TRIM6-201ENST00000278302 GRPEL1Q9HAV7 217 aa9.64□□□□□ -0.87
TRIM6-201ENST00000278302 TRAK2O60296 914 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 MCM4P33991 863 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 MRE11P49959 708 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 TPM2P07951 284 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 ADGRB1O14514 1584 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 NEO1Q92859 1461 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
TRIM6-201ENST00000278302 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRIM6-201ENST00000278302 FAM13BQ9NYF5 915 aa9.63□□□□□ -0.87
TRIM6-201ENST00000278302 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
TRIM6-201ENST00000278302 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
TRIM6-201ENST00000278302 ZHX1Q9UKY1 873 aaPredicted RBP9.62□□□□□ -0.87
TRIM6-201ENST00000278302 CAMSAP1Q5T5Y3 1602 aa9.62□□□□□ -0.87
TRIM6-201ENST00000278302 PUS7Q96PZ0 661 aaKnown RBP9.62□□□□□ -0.87
TRIM6-201ENST00000278302 COG6Q9Y2V7 657 aa9.62□□□□□ -0.87
TRIM6-201ENST00000278302 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
TRIM6-201ENST00000278302 PANK1Q8TE04 598 aa9.61□□□□□ -0.87
TRIM6-201ENST00000278302 PRDM10Q9NQV6 1147 aa9.61□□□□□ -0.87
TRIM6-201ENST00000278302 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms