RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 TNNQ9UQP3 1299 aa14.08□□□□□ -0.16
PRUNE1-201ENST00000271620 ADGRB3O60242 1522 aa14.08□□□□□ -0.16
PRUNE1-201ENST00000271620 U2AF1L5P0DN76 240 aaPredicted RBP14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 U2AF1Q01081 240 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 CLUAP1Q96AJ1 413 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 KIAA1210Q9ULL0 1709 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 IGHDP01880 384 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 FBXO31Q5XUX0 539 aaPredicted RBP14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 GGNBP2Q9H3C7 697 aa14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 MINK1Q8N4C8 1332 aaPredicted RBP14.07□□□□□ -0.16
PRUNE1-201ENST00000271620 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
PRUNE1-201ENST00000271620 RTL5Q5HYW3 569 aaPredicted RBP14.06□□□□□ -0.16
PRUNE1-201ENST00000271620 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
PRUNE1-201ENST00000271620 SBNO2Q9Y2G9 1366 aa14.05□□□□□ -0.16
PRUNE1-201ENST00000271620 EVC2Q86UK5 1308 aa14.05□□□□□ -0.16
PRUNE1-201ENST00000271620 U2SURPO15042 1029 aaKnown RBP14.05□□□□□ -0.16
PRUNE1-201ENST00000271620 RUNDC1Q96C34 613 aa14.05□□□□□ -0.16
PRUNE1-201ENST00000271620 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 IFT172Q9UG01 1749 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 ADGRB1O14514 1584 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 LMTK2Q8IWU2 1503 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 FBLN1P23142 703 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 ABCC3O15438 1527 aa14.04□□□□□ -0.16
PRUNE1-201ENST00000271620 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
PRUNE1-201ENST00000271620 C8orf34Q49A92 452 aa14.03□□□□□ -0.16
PRUNE1-201ENST00000271620 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
PRUNE1-201ENST00000271620 PRAM1Q96QH2 718 aa14.02□□□□□ -0.16
PRUNE1-201ENST00000271620 NEFMP07197 916 aa14.02□□□□□ -0.17
PRUNE1-201ENST00000271620 RLBP1P12271 317 aa14.02□□□□□ -0.17
PRUNE1-201ENST00000271620 RPGRIP1LQ68CZ1 1315 aa14.02□□□□□ -0.17
PRUNE1-201ENST00000271620 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 CFAP53Q96M91 514 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 POGKQ9P215 609 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 MLECQ14165 292 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 FAM161AQ3B820 660 aa14.01□□□□□ -0.17
PRUNE1-201ENST00000271620 SIGLEC1Q9BZZ2 1709 aa14□□□□□ -0.17
PRUNE1-201ENST00000271620 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
PRUNE1-201ENST00000271620 PPLO60437 1756 aa14□□□□□ -0.17
PRUNE1-201ENST00000271620 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
PRUNE1-201ENST00000271620 SETBP1Q9Y6X0 1596 aa13.99□□□□□ -0.17
PRUNE1-201ENST00000271620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRUNE1-201ENST00000271620 GLI2P10070 1586 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 TULP4Q9NRJ4 1543 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 ANKRD36BQ8N2N9 1353 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 PCDHB15Q9Y5E8 787 aa13.97□□□□□ -0.17
PRUNE1-201ENST00000271620 WAPLQ7Z5K2 1190 aa13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 FYB1O15117 783 aa13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 FAM69CQ0P6D2 419 aa13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 SLC52A1Q9NWF4 448 aa13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 CABP1Q9NZU7 370 aa13.96□□□□□ -0.17
PRUNE1-201ENST00000271620 SEC24BO95487 1268 aa13.95□□□□□ -0.18
PRUNE1-201ENST00000271620 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
PRUNE1-201ENST00000271620 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
PRUNE1-201ENST00000271620 SHPRHQ149N8 1683 aa13.94□□□□□ -0.18
PRUNE1-201ENST00000271620 NGEFQ8N5V2 710 aa13.94□□□□□ -0.18
PRUNE1-201ENST00000271620 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
PRUNE1-201ENST00000271620 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
PRUNE1-201ENST00000271620 DIP2CQ9Y2E4 1556 aa13.94□□□□□ -0.18
PRUNE1-201ENST00000271620 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
PRUNE1-201ENST00000271620 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
PRUNE1-201ENST00000271620 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
PRUNE1-201ENST00000271620 MYH16Q9H6N6 1097 aa13.92□□□□□ -0.18
PRUNE1-201ENST00000271620 NEO1Q92859 1461 aa13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 ZC3H13Q5T200 1668 aaKnown RBP13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 CFAP74Q9C0B2 1584 aa13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 TMPOP42166 694 aaKnown RBP13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 TERF2IPQ9NYB0 399 aa13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 SMC4Q9NTJ3 1288 aa13.91□□□□□ -0.18
PRUNE1-201ENST00000271620 IQSEC2Q5JU85 1478 aa13.9□□□□□ -0.18
PRUNE1-201ENST00000271620 ARHGEF28Q8N1W1 1705 aaKnown RBP13.9□□□□□ -0.18
PRUNE1-201ENST00000271620 RIPK4P57078 832 aa13.9□□□□□ -0.18
PRUNE1-201ENST00000271620 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
PRUNE1-201ENST00000271620 PIK3C2BO00750 1634 aa13.9□□□□□ -0.18
PRUNE1-201ENST00000271620 PLEKHF1Q96S99 279 aa13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 NCKAP5LQ9HCH0 1330 aa13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 ABCC11Q96J66 1382 aa13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 HMOX1P09601 288 aa13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 MYO5BQ9ULV0 1848 aa13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 YTHDC2Q9H6S0 1430 aaKnown RBP13.89□□□□□ -0.19
PRUNE1-201ENST00000271620 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
PRUNE1-201ENST00000271620 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
PRUNE1-201ENST00000271620 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
PRUNE1-201ENST00000271620 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
PRUNE1-201ENST00000271620 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
PRUNE1-201ENST00000271620 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
PRUNE1-201ENST00000271620 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
PRUNE1-201ENST00000271620 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
PRUNE1-201ENST00000271620 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms