RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 MYOM2P54296 1465 aa20.9■□□□□ 0.94
MAP1LC3B-201ENST00000268607 LRPPRCP42704 1394 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3B-201ENST00000268607 SKAP1Q86WV1 359 aa20.89■□□□□ 0.93
MAP1LC3B-201ENST00000268607 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-201ENST00000268607 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
MAP1LC3B-201ENST00000268607 A2ML1A8K2U0 1454 aa20.88■□□□□ 0.93
MAP1LC3B-201ENST00000268607 KNSTRNQ9Y448 316 aa20.88■□□□□ 0.93
MAP1LC3B-201ENST00000268607 SPATA31D1Q6ZQQ2 1576 aa20.86■□□□□ 0.93
MAP1LC3B-201ENST00000268607 LTKP29376 864 aa20.86■□□□□ 0.93
MAP1LC3B-201ENST00000268607 FRAT1Q92837 279 aaPredicted RBP20.86■□□□□ 0.93
MAP1LC3B-201ENST00000268607 NRXN1Q9ULB1 1477 aa20.86■□□□□ 0.93
MAP1LC3B-201ENST00000268607 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
MAP1LC3B-201ENST00000268607 SLC26A8Q96RN1 970 aa20.84■□□□□ 0.93
MAP1LC3B-201ENST00000268607 RSPH6AQ9H0K4 717 aa20.84■□□□□ 0.93
MAP1LC3B-201ENST00000268607 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
MAP1LC3B-201ENST00000268607 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
MAP1LC3B-201ENST00000268607 NFKBIBQ15653 356 aa20.83■□□□□ 0.92
MAP1LC3B-201ENST00000268607 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.92
MAP1LC3B-201ENST00000268607 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
MAP1LC3B-201ENST00000268607 DDRGK1Q96HY6 314 aa20.82■□□□□ 0.92
MAP1LC3B-201ENST00000268607 MINK1Q8N4C8 1332 aaPredicted RBP20.82■□□□□ 0.92
MAP1LC3B-201ENST00000268607 PRAM1Q96QH2 718 aa20.81■□□□□ 0.92
MAP1LC3B-201ENST00000268607 PLIN1O60240 522 aa20.81■□□□□ 0.92
MAP1LC3B-201ENST00000268607 CDCA8Q53HL2 280 aa20.81■□□□□ 0.92
MAP1LC3B-201ENST00000268607 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
MAP1LC3B-201ENST00000268607 NEURL4Q96JN8 1562 aa20.8■□□□□ 0.92
MAP1LC3B-201ENST00000268607 CDCA7LQ96GN5 454 aa20.8■□□□□ 0.92
MAP1LC3B-201ENST00000268607 FER1L4A9Z1Z3 1794 aa20.8■□□□□ 0.92
MAP1LC3B-201ENST00000268607 AMER1Q5JTC6 1135 aaPredicted RBP20.8■□□□□ 0.92
MAP1LC3B-201ENST00000268607 CABP2Q9NPB3 220 aa20.79■□□□□ 0.92
MAP1LC3B-201ENST00000268607 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
MAP1LC3B-201ENST00000268607 EIF3AQ14152 1382 aaKnown RBP20.79■□□□□ 0.92
MAP1LC3B-201ENST00000268607 C3P01024 1663 aa20.79■□□□□ 0.92
MAP1LC3B-201ENST00000268607 POGKQ9P215 609 aa20.78■□□□□ 0.92
MAP1LC3B-201ENST00000268607 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
MAP1LC3B-201ENST00000268607 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
MAP1LC3B-201ENST00000268607 ADAMTS8Q9UP79 889 aa20.77■□□□□ 0.92
MAP1LC3B-201ENST00000268607 METP08581 1390 aa20.76■□□□□ 0.91
MAP1LC3B-201ENST00000268607 ASXL1Q8IXJ9 1541 aa20.75■□□□□ 0.91
MAP1LC3B-201ENST00000268607 TMEM2Q9UHN6 1383 aa20.74■□□□□ 0.91
MAP1LC3B-201ENST00000268607 RIMS1Q86UR5 1692 aaKnown RBP20.74■□□□□ 0.91
MAP1LC3B-201ENST00000268607 PLEKHH1Q9ULM0 1364 aa20.74■□□□□ 0.91
MAP1LC3B-201ENST00000268607 NUTM2FA1L443 756 aa20.73■□□□□ 0.91
MAP1LC3B-201ENST00000268607 FAM43AQ8N2R8 423 aa20.73■□□□□ 0.91
MAP1LC3B-201ENST00000268607 CRBNQ96SW2 442 aa20.73■□□□□ 0.91
MAP1LC3B-201ENST00000268607 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 ZFYVE9O95405 1425 aa20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 PTPRMP28827 1452 aa20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 ALKQ9UM73 1620 aa20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 KIAA1210Q9ULL0 1709 aa20.72■□□□□ 0.91
MAP1LC3B-201ENST00000268607 SRPK2P78362 688 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3B-201ENST00000268607 CARD14Q9BXL6 1004 aa20.71■□□□□ 0.91
MAP1LC3B-201ENST00000268607 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
MAP1LC3B-201ENST00000268607 YTHDC2Q9H6S0 1430 aaKnown RBP20.7■□□□□ 0.91
MAP1LC3B-201ENST00000268607 WDR43Q15061 677 aaKnown RBP eCLIP20.69■□□□□ 0.9
MAP1LC3B-201ENST00000268607 NCKAP5LQ9HCH0 1330 aa20.68■□□□□ 0.9
MAP1LC3B-201ENST00000268607 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
MAP1LC3B-201ENST00000268607 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
MAP1LC3B-201ENST00000268607 EID1Q9Y6B2 187 aa20.68■□□□□ 0.9
MAP1LC3B-201ENST00000268607 TNNT2P45379 298 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-201ENST00000268607 SETBP1Q9Y6X0 1596 aa20.66■□□□□ 0.9
MAP1LC3B-201ENST00000268607 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-201ENST00000268607 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
MAP1LC3B-201ENST00000268607 FRAT2O75474 233 aaPredicted RBP20.64■□□□□ 0.9
MAP1LC3B-201ENST00000268607 MYOM1P52179 1685 aa20.64■□□□□ 0.89
MAP1LC3B-201ENST00000268607 HDGFP51858 240 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-201ENST00000268607 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
MAP1LC3B-201ENST00000268607 ZMYND15Q9H091 742 aa20.64■□□□□ 0.89
MAP1LC3B-201ENST00000268607 QRICH2Q9H0J4 1663 aa20.64■□□□□ 0.89
MAP1LC3B-201ENST00000268607 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-201ENST00000268607 GLIPR1L2Q4G1C9 344 aa20.63■□□□□ 0.89
MAP1LC3B-201ENST00000268607 VSIG10Q8N0Z9 540 aa20.63■□□□□ 0.89
MAP1LC3B-201ENST00000268607 CDK19Q9BWU1 502 aa20.62■□□□□ 0.89
MAP1LC3B-201ENST00000268607 BLMP54132 1417 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-201ENST00000268607 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3B-201ENST00000268607 EVC2Q86UK5 1308 aa20.62■□□□□ 0.89
MAP1LC3B-201ENST00000268607 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
MAP1LC3B-201ENST00000268607 NLRP1Q9C000 1473 aa20.61■□□□□ 0.89
MAP1LC3B-201ENST00000268607 SLC24A1O60721 1099 aa20.6■□□□□ 0.89
MAP1LC3B-201ENST00000268607 ADAMTS13Q76LX8 1427 aa20.59■□□□□ 0.89
MAP1LC3B-201ENST00000268607 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
MAP1LC3B-201ENST00000268607 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.89
MAP1LC3B-201ENST00000268607 HSPA2P54652 639 aa20.58■□□□□ 0.89
MAP1LC3B-201ENST00000268607 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
MAP1LC3B-201ENST00000268607 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.89
MAP1LC3B-201ENST00000268607 FAM161AQ3B820 660 aa20.58■□□□□ 0.88
MAP1LC3B-201ENST00000268607 CABP1Q9NZU7 370 aa20.58■□□□□ 0.88
MAP1LC3B-201ENST00000268607 ROBO2Q9HCK4 1378 aa20.57■□□□□ 0.88
MAP1LC3B-201ENST00000268607 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
MAP1LC3B-201ENST00000268607 ADAMTSL3P82987 1691 aa20.56■□□□□ 0.88
MAP1LC3B-201ENST00000268607 RRAGDQ9NQL2 400 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3B-201ENST00000268607 APAF1O14727 1248 aa20.55■□□□□ 0.88
MAP1LC3B-201ENST00000268607 NSD3Q9BZ95 1437 aa20.54■□□□□ 0.88
MAP1LC3B-201ENST00000268607 PTPRUQ92729 1446 aa20.54■□□□□ 0.88
MAP1LC3B-201ENST00000268607 CENPQQ7L2Z9 268 aaPredicted RBP20.54■□□□□ 0.88
MAP1LC3B-201ENST00000268607 NPC1L1Q9UHC9 1359 aa20.53■□□□□ 0.88
MAP1LC3B-201ENST00000268607 SBNO2Q9Y2G9 1366 aa20.53■□□□□ 0.88
MAP1LC3B-201ENST00000268607 MORC1Q86VD1 984 aa20.53■□□□□ 0.88
MAP1LC3B-201ENST00000268607 PLEKHG1Q9ULL1 1385 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms