RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 MAGEC2Q9UBF1 373 aaPredicted RBP15.18■□□□□ 0.02
CDH11-201ENST00000268603 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
CDH11-201ENST00000268603 TIMELESSQ9UNS1 1208 aa15.17■□□□□ 0.02
CDH11-201ENST00000268603 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
CDH11-201ENST00000268603 ATF3P18847 181 aa15.16■□□□□ 0.02
CDH11-201ENST00000268603 SMC3Q9UQE7 1217 aa15.16■□□□□ 0.02
CDH11-201ENST00000268603 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
CDH11-201ENST00000268603 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
CDH11-201ENST00000268603 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
CDH11-201ENST00000268603 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
CDH11-201ENST00000268603 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
CDH11-201ENST00000268603 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
CDH11-201ENST00000268603 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
CDH11-201ENST00000268603 ERLIN2O94905 339 aa15.13■□□□□ 0.01
CDH11-201ENST00000268603 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
CDH11-201ENST00000268603 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
CDH11-201ENST00000268603 NUP155O75694 1391 aa15.13■□□□□ 0.01
CDH11-201ENST00000268603 EZRP15311 586 aaKnown RBP15.13■□□□□ 0.01
CDH11-201ENST00000268603 KIF27Q86VH2 1401 aa15.13■□□□□ 0.01
CDH11-201ENST00000268603 REC8O95072 547 aa15.12■□□□□ 0.01
CDH11-201ENST00000268603 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
CDH11-201ENST00000268603 CHMP5Q9NZZ3 219 aa15.12■□□□□ 0.01
CDH11-201ENST00000268603 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
CDH11-201ENST00000268603 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
CDH11-201ENST00000268603 AXDND1Q5T1B0 1012 aaPredicted RBP15.11■□□□□ 0.01
CDH11-201ENST00000268603 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 DESP17661 470 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 TAX1BP1Q86VP1 789 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 TXLNAP40222 546 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
CDH11-201ENST00000268603 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
CDH11-201ENST00000268603 TANGO6Q9C0B7 1094 aa15.1■□□□□ 0.01
CDH11-201ENST00000268603 NUTM2BA6NNL0 878 aaPredicted RBP15.1■□□□□ 0.01
CDH11-201ENST00000268603 NUTM2EB1AL46 878 aaPredicted RBP15.1■□□□□ 0.01
CDH11-201ENST00000268603 KIF6Q6ZMV9 814 aa15.1■□□□□ 0.01
CDH11-201ENST00000268603 NUTM2AQ8IVF1 878 aaPredicted RBP15.1■□□□□ 0.01
CDH11-201ENST00000268603 NAT10Q9H0A0 1025 aaKnown RBP15.1■□□□□ 0.01
CDH11-201ENST00000268603 SMARCE1Q969G3 411 aa15.09■□□□□ 0.01
CDH11-201ENST00000268603 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
CDH11-201ENST00000268603 ERC2O15083 957 aa15.09■□□□□ 0.01
CDH11-201ENST00000268603 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
CDH11-201ENST00000268603 SDF4Q9BRK5 362 aa15.09■□□□□ 0.01
CDH11-201ENST00000268603 FILIP1LQ4L180 1135 aa15.08■□□□□ 0.01
CDH11-201ENST00000268603 LEKR1Q6ZMV7 388 aa15.08■□□□□ 0.01
CDH11-201ENST00000268603 GBP2P32456 591 aaPredicted RBP15.08■□□□□ 0
CDH11-201ENST00000268603 SSR1P43307 286 aaKnown RBP15.08■□□□□ 0
CDH11-201ENST00000268603 NUTM2GQ5VZR2 741 aa15.08■□□□□ 0
CDH11-201ENST00000268603 ZSCAN29Q8IWY8 852 aaPredicted RBP15.08■□□□□ 0
CDH11-201ENST00000268603 SMC2O95347 1197 aa15.08■□□□□ 0
CDH11-201ENST00000268603 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
CDH11-201ENST00000268603 SCLT1Q96NL6 688 aa15.07■□□□□ 0
CDH11-201ENST00000268603 PSMD1Q99460 953 aa15.07■□□□□ 0
CDH11-201ENST00000268603 DNAJC2Q99543 621 aaKnown RBP15.07■□□□□ 0
CDH11-201ENST00000268603 GSE1Q14687 1217 aa15.07■□□□□ 0
CDH11-201ENST00000268603 CLASRPQ8N2M8 674 aaKnown RBP15.07■□□□□ 0
CDH11-201ENST00000268603 TSPYL4Q9UJ04 414 aa15.07■□□□□ 0
CDH11-201ENST00000268603 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
CDH11-201ENST00000268603 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
CDH11-201ENST00000268603 DYDC1Q8WWB3 177 aa15.06■□□□□ 0
CDH11-201ENST00000268603 DEF6Q9H4E7 631 aa15.06■□□□□ 0
CDH11-201ENST00000268603 GOLGA6L10A6NI86 522 aa15.06■□□□□ 0
CDH11-201ENST00000268603 GOLGA6L7A0A1B0GV03 622 aa15.06■□□□□ 0
CDH11-201ENST00000268603 CENPHQ9H3R5 247 aa15.06■□□□□ 0
CDH11-201ENST00000268603 CCDC112Q8NEF3 446 aa15.06■□□□□ 0
CDH11-201ENST00000268603 STRN4Q9NRL3 753 aa15.06■□□□□ 0
CDH11-201ENST00000268603 CCDC181Q5TID7 509 aa15.05■□□□□ 0
CDH11-201ENST00000268603 CCER2I3L3R5 266 aa15.05■□□□□ 0
CDH11-201ENST00000268603 FAM161AQ3B820 660 aa15.05■□□□□ -0
CDH11-201ENST00000268603 WIZO95785 1651 aa15.05■□□□□ -0
CDH11-201ENST00000268603 FMNL2Q96PY5 1086 aa15.05■□□□□ -0
CDH11-201ENST00000268603 KIAA0754O94854 1291 aa15.04■□□□□ -0
CDH11-201ENST00000268603 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
CDH11-201ENST00000268603 CCDC66A2RUB6 948 aa15.04■□□□□ -0
CDH11-201ENST00000268603 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
CDH11-201ENST00000268603 INCENPQ9NQS7 918 aa15.04■□□□□ -0
CDH11-201ENST00000268603 CA8P35219 290 aa15.04■□□□□ -0
CDH11-201ENST00000268603 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
CDH11-201ENST00000268603 ZNF76P36508 570 aa15.03■□□□□ -0
CDH11-201ENST00000268603 TTC39AQ5SRH9 613 aa15.03■□□□□ -0
CDH11-201ENST00000268603 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
CDH11-201ENST00000268603 FSD1Q9BTV5 496 aa15.03■□□□□ -0
CDH11-201ENST00000268603 ZNHIT6Q9NWK9 470 aaKnown RBP15.03■□□□□ -0
CDH11-201ENST00000268603 FAM43AQ8N2R8 423 aa15.03■□□□□ -0
CDH11-201ENST00000268603 ANAPC15P60006 121 aa15.02■□□□□ -0
CDH11-201ENST00000268603 ERC1Q8IUD2 1116 aa15.02■□□□□ -0
CDH11-201ENST00000268603 COG6Q9Y2V7 657 aa15.02■□□□□ -0
CDH11-201ENST00000268603 SSBP05455 408 aaKnown RBP eCLIP15.02□□□□□ -0.01
CDH11-201ENST00000268603 FHAD1B1AJZ9 1412 aa15.02□□□□□ -0.01
CDH11-201ENST00000268603 GNL3LQ9NVN8 582 aaKnown RBP15.02□□□□□ -0.01
CDH11-201ENST00000268603 TTLL12Q14166 644 aaPredicted RBP15.01□□□□□ -0.01
CDH11-201ENST00000268603 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
CDH11-201ENST00000268603 NF2P35240 595 aa15.01□□□□□ -0.01
CDH11-201ENST00000268603 COMMD10Q9Y6G5 202 aa15.01□□□□□ -0.01
CDH11-201ENST00000268603 SOGA3Q5TF21 947 aa15.01□□□□□ -0.01
CDH11-201ENST00000268603 INTS3Q68E01 1043 aaKnown RBP15.01□□□□□ -0.01
CDH11-201ENST00000268603 ROCK1Q13464 1354 aa15□□□□□ -0.01
CDH11-201ENST00000268603 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
CDH11-201ENST00000268603 VPS8Q8N3P4 1428 aa15□□□□□ -0.01
CDH11-201ENST00000268603 CEBPZQ03701 1054 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms