RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 TTC37Q6PGP7 1564 aa19.48■□□□□ 0.71
SCAMP2-201ENST00000268099 FBLN2P98095 1184 aa19.48■□□□□ 0.71
SCAMP2-201ENST00000268099 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
SCAMP2-201ENST00000268099 POLR3AO14802 1390 aaPredicted RBP19.48■□□□□ 0.71
SCAMP2-201ENST00000268099 HSCBQ8IWL3 235 aa19.47■□□□□ 0.71
SCAMP2-201ENST00000268099 SHPRHQ149N8 1683 aa19.47■□□□□ 0.71
SCAMP2-201ENST00000268099 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
SCAMP2-201ENST00000268099 NCOA3Q9Y6Q9 1424 aa19.46■□□□□ 0.71
SCAMP2-201ENST00000268099 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
SCAMP2-201ENST00000268099 TRIM44Q96DX7 344 aaPredicted RBP19.45■□□□□ 0.7
SCAMP2-201ENST00000268099 CARD14Q9BXL6 1004 aa19.45■□□□□ 0.7
SCAMP2-201ENST00000268099 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
SCAMP2-201ENST00000268099 IQSEC2Q5JU85 1478 aa19.44■□□□□ 0.7
SCAMP2-201ENST00000268099 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
SCAMP2-201ENST00000268099 DDIT3P35638 169 aa19.43■□□□□ 0.7
SCAMP2-201ENST00000268099 MVPQ14764 893 aaKnown RBP19.43■□□□□ 0.7
SCAMP2-201ENST00000268099 TPM2P07951 284 aa19.42■□□□□ 0.7
SCAMP2-201ENST00000268099 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
SCAMP2-201ENST00000268099 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
SCAMP2-201ENST00000268099 WDR63Q8IWG1 891 aa19.42■□□□□ 0.7
SCAMP2-201ENST00000268099 ERVK-7P63135 1459 aa19.42■□□□□ 0.7
SCAMP2-201ENST00000268099 KIAA1210Q9ULL0 1709 aa19.41■□□□□ 0.7
SCAMP2-201ENST00000268099 TCP11L2Q8N4U5 519 aa19.41■□□□□ 0.7
SCAMP2-201ENST00000268099 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
SCAMP2-201ENST00000268099 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
SCAMP2-201ENST00000268099 TRPM2O94759 1503 aa19.4■□□□□ 0.7
SCAMP2-201ENST00000268099 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
SCAMP2-201ENST00000268099 TNPO1Q92973 898 aaKnown RBP19.39■□□□□ 0.69
SCAMP2-201ENST00000268099 KANK1Q14678 1352 aa19.37■□□□□ 0.69
SCAMP2-201ENST00000268099 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
SCAMP2-201ENST00000268099 CLTCL1P53675 1640 aa19.37■□□□□ 0.69
SCAMP2-201ENST00000268099 SNX21Q969T3 373 aa19.37■□□□□ 0.69
SCAMP2-201ENST00000268099 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 SMC5Q8IY18 1101 aa19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 CIZ1Q9ULV3 898 aaPredicted RBP19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 SKOR2Q2VWA4 1001 aaPredicted RBP19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 DZIP1LQ8IYY4 767 aaKnown RBP19.36■□□□□ 0.69
SCAMP2-201ENST00000268099 RBM25P49756 843 aaKnown RBP19.35■□□□□ 0.69
SCAMP2-201ENST00000268099 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
SCAMP2-201ENST00000268099 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
SCAMP2-201ENST00000268099 PDCL3Q9H2J4 239 aa19.34■□□□□ 0.69
SCAMP2-201ENST00000268099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCAMP2-201ENST00000268099 RAB3GAP1Q15042 981 aa19.34■□□□□ 0.69
SCAMP2-201ENST00000268099 PTMSP20962 102 aa19.33■□□□□ 0.69
SCAMP2-201ENST00000268099 MORC1Q86VD1 984 aa19.32■□□□□ 0.68
SCAMP2-201ENST00000268099 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-201ENST00000268099 CCDC173Q0VFZ6 552 aa19.32■□□□□ 0.68
SCAMP2-201ENST00000268099 KIAA1211Q6ZU35 1233 aa19.32■□□□□ 0.68
SCAMP2-201ENST00000268099 TNNT2P45379 298 aaPredicted RBP19.31■□□□□ 0.68
SCAMP2-201ENST00000268099 PTPRTO14522 1441 aa19.31■□□□□ 0.68
SCAMP2-201ENST00000268099 PPP1R9BQ96SB3 815 aa19.3■□□□□ 0.68
SCAMP2-201ENST00000268099 NSD3Q9BZ95 1437 aa19.3■□□□□ 0.68
SCAMP2-201ENST00000268099 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
SCAMP2-201ENST00000268099 DDX19BQ9UMR2 479 aa19.29■□□□□ 0.68
SCAMP2-201ENST00000268099 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
SCAMP2-201ENST00000268099 ZSCAN30Q86W11 494 aa19.28■□□□□ 0.68
SCAMP2-201ENST00000268099 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
SCAMP2-201ENST00000268099 MAP3K4Q9Y6R4 1608 aa19.27■□□□□ 0.68
SCAMP2-201ENST00000268099 TRIM27P14373 513 aa19.27■□□□□ 0.68
SCAMP2-201ENST00000268099 NASPP49321 788 aaPredicted RBP19.27■□□□□ 0.68
SCAMP2-201ENST00000268099 ITPRIPQ8IWB1 547 aa19.27■□□□□ 0.68
SCAMP2-201ENST00000268099 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.68
SCAMP2-201ENST00000268099 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.67
SCAMP2-201ENST00000268099 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.67
SCAMP2-201ENST00000268099 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
SCAMP2-201ENST00000268099 OFD1O75665 1012 aa19.26■□□□□ 0.67
SCAMP2-201ENST00000268099 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 MTHFSP49914 203 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 ANP32BQ92688 251 aaKnown RBP19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 MYOM2P54296 1465 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 IBTKQ9P2D0 1353 aaPredicted RBP19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 KIF2CQ99661 725 aa19.24■□□□□ 0.67
SCAMP2-201ENST00000268099 TET3O43151 1660 aa19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 NUCB1Q02818 461 aa19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 ATF7IPQ6VMQ6 1270 aa19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
SCAMP2-201ENST00000268099 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 MSNP26038 577 aaKnown RBP19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 USP32Q8NFA0 1604 aa19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
SCAMP2-201ENST00000268099 K7ELQ4 463 aaPredicted RBP19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 SSFA2P28290 1259 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 TERF1P54274 439 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 EXOSC9Q06265 439 aaKnown RBP19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 LNPKQ9C0E8 428 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 ADGRF5Q8IZF2 1346 aa19.21■□□□□ 0.67
SCAMP2-201ENST00000268099 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
SCAMP2-201ENST00000268099 DEPDC5O75140 1603 aa19.2■□□□□ 0.66
SCAMP2-201ENST00000268099 RIPK4P57078 832 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms