RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 A0A0U1RQG5 324 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-201ENST00000267199 API5Q9BZZ5 524 aaKnown RBP14.19□□□□□ -0.14
VPS33A-201ENST00000267199 MCM4P33991 863 aa14.19□□□□□ -0.14
VPS33A-201ENST00000267199 BCL11BQ9C0K0 894 aaPredicted RBP14.19□□□□□ -0.14
VPS33A-201ENST00000267199 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
VPS33A-201ENST00000267199 ESPNB1AK53 854 aa14.19□□□□□ -0.14
VPS33A-201ENST00000267199 CFAP43Q8NDM7 1665 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 MPNDQ8N594 471 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
VPS33A-201ENST00000267199 GNAI1P63096 354 aa14.17□□□□□ -0.14
VPS33A-201ENST00000267199 TNNT3P45378 269 aaPredicted RBP14.17□□□□□ -0.14
VPS33A-201ENST00000267199 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
VPS33A-201ENST00000267199 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
VPS33A-201ENST00000267199 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
VPS33A-201ENST00000267199 ZNF592Q92610 1267 aa14.15□□□□□ -0.14
VPS33A-201ENST00000267199 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
VPS33A-201ENST00000267199 ZNF771Q7L3S4 317 aaPredicted RBP14.15□□□□□ -0.14
VPS33A-201ENST00000267199 DUSP27Q5VZP5 1158 aa14.15□□□□□ -0.14
VPS33A-201ENST00000267199 WDR63Q8IWG1 891 aa14.15□□□□□ -0.14
VPS33A-201ENST00000267199 PRAM1Q96QH2 718 aa14.15□□□□□ -0.14
VPS33A-201ENST00000267199 NUCB2P80303 420 aa14.14□□□□□ -0.15
VPS33A-201ENST00000267199 CSPP1Q1MSJ5 1256 aa14.14□□□□□ -0.15
VPS33A-201ENST00000267199 NECTIN2Q92692 538 aa14.14□□□□□ -0.15
VPS33A-201ENST00000267199 NOB1Q9ULX3 412 aaKnown RBP14.14□□□□□ -0.15
VPS33A-201ENST00000267199 KIF14Q15058 1648 aa14.13□□□□□ -0.15
VPS33A-201ENST00000267199 TPM2P07951 284 aa14.13□□□□□ -0.15
VPS33A-201ENST00000267199 NUP153P49790 1475 aaKnown RBP14.13□□□□□ -0.15
VPS33A-201ENST00000267199 CTTNBP2Q8WZ74 1663 aa14.13□□□□□ -0.15
VPS33A-201ENST00000267199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
VPS33A-201ENST00000267199 TCOF1Q13428 1488 aaKnown RBP14.12□□□□□ -0.15
VPS33A-201ENST00000267199 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
VPS33A-201ENST00000267199 C1orf115Q9H7X2 142 aa14.12□□□□□ -0.15
VPS33A-201ENST00000267199 REC8O95072 547 aa14.12□□□□□ -0.15
VPS33A-201ENST00000267199 MVPQ14764 893 aaKnown RBP14.12□□□□□ -0.15
VPS33A-201ENST00000267199 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
VPS33A-201ENST00000267199 ANO2Q9NQ90 1003 aa14.12□□□□□ -0.15
VPS33A-201ENST00000267199 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
VPS33A-201ENST00000267199 ATF7IPQ6VMQ6 1270 aa14.11□□□□□ -0.15
VPS33A-201ENST00000267199 RRP9O43818 475 aaKnown RBP14.11□□□□□ -0.15
VPS33A-201ENST00000267199 CABP1Q9NZU7 370 aa14.1□□□□□ -0.15
VPS33A-201ENST00000267199 ADGRF5Q8IZF2 1346 aa14.1□□□□□ -0.15
VPS33A-201ENST00000267199 RALGAPBQ86X10 1494 aa14.1□□□□□ -0.15
VPS33A-201ENST00000267199 HSP90B1P14625 803 aaKnown RBP14.1□□□□□ -0.15
VPS33A-201ENST00000267199 NINLQ9Y2I6 1382 aa14.09□□□□□ -0.15
VPS33A-201ENST00000267199 TRHP20396 242 aaPredicted RBP14.09□□□□□ -0.15
VPS33A-201ENST00000267199 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
VPS33A-201ENST00000267199 FKBP5Q13451 457 aaPredicted RBP14.09□□□□□ -0.15
VPS33A-201ENST00000267199 UBE2Q2Q8WVN8 375 aa14.09□□□□□ -0.15
VPS33A-201ENST00000267199 RAPGEF3O95398 923 aa14.08□□□□□ -0.16
VPS33A-201ENST00000267199 RARSP54136 660 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 HTATSF1O43719 755 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.16
VPS33A-201ENST00000267199 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
VPS33A-201ENST00000267199 DHX29Q7Z478 1369 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 CDC45O75419 566 aa14.08□□□□□ -0.16
VPS33A-201ENST00000267199 EIF2S2P20042 333 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 GNL2Q13823 731 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 INTS3Q68E01 1043 aaKnown RBP14.08□□□□□ -0.16
VPS33A-201ENST00000267199 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 HDAC5Q9UQL6 1122 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 RAPGEF6Q8TEU7 1601 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 TBC1D2Q9BYX2 928 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
VPS33A-201ENST00000267199 NKTRP30414 1462 aaKnown RBP14.06□□□□□ -0.16
VPS33A-201ENST00000267199 TMPOP42166 694 aaKnown RBP14.06□□□□□ -0.16
VPS33A-201ENST00000267199 FAM69CQ0P6D2 419 aa14.06□□□□□ -0.16
VPS33A-201ENST00000267199 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
VPS33A-201ENST00000267199 CCDC39Q9UFE4 941 aa14.06□□□□□ -0.16
VPS33A-201ENST00000267199 VPS37CA5D8V6 355 aaPredicted RBP14.06□□□□□ -0.16
VPS33A-201ENST00000267199 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
VPS33A-201ENST00000267199 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 ATP10BO94823 1461 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 BECN2A8MW95 431 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 GOLGA6L19H0YKK7 550 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 TULP1O00294 542 aaPredicted RBP14.05□□□□□ -0.16
VPS33A-201ENST00000267199 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
VPS33A-201ENST00000267199 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 TEFQ10587 303 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
VPS33A-201ENST00000267199 TESK2Q96S53 571 aa14.05□□□□□ -0.16
VPS33A-201ENST00000267199 NEK4P51957 841 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 IFT57Q9NWB7 429 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 SLC52A1Q9NWF4 448 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 UQCRHLA0A096LP55 91 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 UQCRHP07919 91 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
VPS33A-201ENST00000267199 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
VPS33A-201ENST00000267199 PRAG1Q86YV5 1406 aa14.03□□□□□ -0.16
VPS33A-201ENST00000267199 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
VPS33A-201ENST00000267199 CCAR2Q8N163 923 aaKnown RBP14.03□□□□□ -0.16
VPS33A-201ENST00000267199 SSH1Q8WYL5 1049 aa14.03□□□□□ -0.16
VPS33A-201ENST00000267199 WDR62O43379 1518 aa14.03□□□□□ -0.16
VPS33A-201ENST00000267199 ZMYND15Q9H091 742 aa14.03□□□□□ -0.16
VPS33A-201ENST00000267199 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms