RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
BEST3-201ENST00000266661 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
BEST3-201ENST00000266661 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
BEST3-201ENST00000266661 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
BEST3-201ENST00000266661 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
BEST3-201ENST00000266661 SETD1BQ9UPS6 1966 aaKnown RBP16.37■□□□□ 0.21
BEST3-201ENST00000266661 ZBTB47Q9UFB7 747 aaPredicted RBP16.35■□□□□ 0.21
BEST3-201ENST00000266661 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
BEST3-201ENST00000266661 ADGRB1O14514 1584 aa16.32■□□□□ 0.2
BEST3-201ENST00000266661 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
BEST3-201ENST00000266661 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
BEST3-201ENST00000266661 NOS1P29475 1434 aa16.31■□□□□ 0.2
BEST3-201ENST00000266661 HSPA2P54652 639 aa16.31■□□□□ 0.2
BEST3-201ENST00000266661 ARHGAP31Q2M1Z3 1444 aa16.31■□□□□ 0.2
BEST3-201ENST00000266661 SPATA31D1Q6ZQQ2 1576 aa16.31■□□□□ 0.2
BEST3-201ENST00000266661 APAF1O14727 1248 aa16.3■□□□□ 0.2
BEST3-201ENST00000266661 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
BEST3-201ENST00000266661 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
BEST3-201ENST00000266661 MYO5BQ9ULV0 1848 aa16.3■□□□□ 0.2
BEST3-201ENST00000266661 PPLO60437 1756 aa16.29■□□□□ 0.2
BEST3-201ENST00000266661 NKTRP30414 1462 aaKnown RBP16.29■□□□□ 0.2
BEST3-201ENST00000266661 TNRQ92752 1358 aa16.29■□□□□ 0.2
BEST3-201ENST00000266661 DEKP35659 375 aaKnown RBP16.29■□□□□ 0.2
BEST3-201ENST00000266661 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
BEST3-201ENST00000266661 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
BEST3-201ENST00000266661 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
BEST3-201ENST00000266661 IDI1Q13907 227 aa16.27■□□□□ 0.2
BEST3-201ENST00000266661 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
BEST3-201ENST00000266661 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
BEST3-201ENST00000266661 SHPRHQ149N8 1683 aa16.27■□□□□ 0.19
BEST3-201ENST00000266661 E9PSI1 815 aa16.27■□□□□ 0.19
BEST3-201ENST00000266661 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
BEST3-201ENST00000266661 PIK3C2BO00750 1634 aa16.26■□□□□ 0.19
BEST3-201ENST00000266661 USP32Q8NFA0 1604 aa16.26■□□□□ 0.19
BEST3-201ENST00000266661 NBR1Q14596 966 aa16.26■□□□□ 0.19
BEST3-201ENST00000266661 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
BEST3-201ENST00000266661 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
BEST3-201ENST00000266661 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
BEST3-201ENST00000266661 CEP170BQ9Y4F5 1589 aaPredicted RBP16.23■□□□□ 0.19
BEST3-201ENST00000266661 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
BEST3-201ENST00000266661 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
BEST3-201ENST00000266661 PUS7Q96PZ0 661 aaKnown RBP16.23■□□□□ 0.19
BEST3-201ENST00000266661 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
BEST3-201ENST00000266661 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
BEST3-201ENST00000266661 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
BEST3-201ENST00000266661 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
BEST3-201ENST00000266661 BCAR3O75815 825 aa16.22■□□□□ 0.19
BEST3-201ENST00000266661 ZNF142P52746 1687 aaPredicted RBP16.21■□□□□ 0.19
BEST3-201ENST00000266661 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
BEST3-201ENST00000266661 C8orf34Q49A92 452 aa16.2■□□□□ 0.18
BEST3-201ENST00000266661 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
BEST3-201ENST00000266661 TRAK1Q9UPV9 953 aa16.2■□□□□ 0.18
BEST3-201ENST00000266661 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
BEST3-201ENST00000266661 A2ML1A8K2U0 1454 aa16.19■□□□□ 0.18
BEST3-201ENST00000266661 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
BEST3-201ENST00000266661 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
BEST3-201ENST00000266661 NEXMIFQ5QGS0 1516 aa16.18■□□□□ 0.18
BEST3-201ENST00000266661 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
BEST3-201ENST00000266661 FAM161AQ3B820 660 aa16.18■□□□□ 0.18
BEST3-201ENST00000266661 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
BEST3-201ENST00000266661 TULP4Q9NRJ4 1543 aa16.17■□□□□ 0.18
BEST3-201ENST00000266661 TMEM131LA2VDJ0 1609 aa16.17■□□□□ 0.18
BEST3-201ENST00000266661 DDRGK1Q96HY6 314 aa16.17■□□□□ 0.18
BEST3-201ENST00000266661 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
BEST3-201ENST00000266661 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
BEST3-201ENST00000266661 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
BEST3-201ENST00000266661 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
BEST3-201ENST00000266661 RUNDC1Q96C34 613 aa16.16■□□□□ 0.18
BEST3-201ENST00000266661 SLC52A1Q9NWF4 448 aa16.16■□□□□ 0.18
BEST3-201ENST00000266661 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
BEST3-201ENST00000266661 USP35Q9P2H5 1018 aa16.16■□□□□ 0.18
BEST3-201ENST00000266661 ZFYVE9O95405 1425 aa16.15■□□□□ 0.18
BEST3-201ENST00000266661 IGHDP01880 384 aa16.14■□□□□ 0.17
BEST3-201ENST00000266661 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
BEST3-201ENST00000266661 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
BEST3-201ENST00000266661 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
BEST3-201ENST00000266661 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
BEST3-201ENST00000266661 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
BEST3-201ENST00000266661 NSD2O96028 1365 aa16.13■□□□□ 0.17
BEST3-201ENST00000266661 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
BEST3-201ENST00000266661 LTKP29376 864 aa16.12■□□□□ 0.17
BEST3-201ENST00000266661 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
BEST3-201ENST00000266661 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
BEST3-201ENST00000266661 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
BEST3-201ENST00000266661 MTHFSP49914 203 aa16.11■□□□□ 0.17
BEST3-201ENST00000266661 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
BEST3-201ENST00000266661 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
BEST3-201ENST00000266661 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
BEST3-201ENST00000266661 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
BEST3-201ENST00000266661 EVC2Q86UK5 1308 aa16.1■□□□□ 0.17
BEST3-201ENST00000266661 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
BEST3-201ENST00000266661 AAMPQ13685 434 aa16.08■□□□□ 0.17
BEST3-201ENST00000266661 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.17
BEST3-201ENST00000266661 TMEM2Q9UHN6 1383 aa16.08■□□□□ 0.16
BEST3-201ENST00000266661 USP19O94966 1318 aa16.08■□□□□ 0.16
BEST3-201ENST00000266661 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
BEST3-201ENST00000266661 NEFMP07197 916 aa16.07■□□□□ 0.16
BEST3-201ENST00000266661 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
BEST3-201ENST00000266661 RRP7AQ9Y3A4 280 aaKnown RBP16.07■□□□□ 0.16
BEST3-201ENST00000266661 ABCC11Q96J66 1382 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms