RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 SHPRHQ149N8 1683 aa15.18■□□□□ 0.02
PMS2-201ENST00000265849 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
PMS2-201ENST00000265849 CDC42BPBQ9Y5S2 1711 aa15.18■□□□□ 0.02
PMS2-201ENST00000265849 MAST1Q9Y2H9 1570 aa15.18■□□□□ 0.02
PMS2-201ENST00000265849 SCAF11Q99590 1463 aaKnown RBP15.18■□□□□ 0.02
PMS2-201ENST00000265849 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
PMS2-201ENST00000265849 ATP10BO94823 1461 aa15.17■□□□□ 0.02
PMS2-201ENST00000265849 PREX2Q70Z35 1606 aa15.17■□□□□ 0.02
PMS2-201ENST00000265849 TNPO1Q92973 898 aaKnown RBP15.17■□□□□ 0.02
PMS2-201ENST00000265849 IQSEC2Q5JU85 1478 aa15.17■□□□□ 0.02
PMS2-201ENST00000265849 SPHKAPQ2M3C7 1700 aa15.16■□□□□ 0.02
PMS2-201ENST00000265849 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
PMS2-201ENST00000265849 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
PMS2-201ENST00000265849 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
PMS2-201ENST00000265849 POLR3AO14802 1390 aaPredicted RBP15.15■□□□□ 0.02
PMS2-201ENST00000265849 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
PMS2-201ENST00000265849 SNX21Q969T3 373 aa15.14■□□□□ 0.01
PMS2-201ENST00000265849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
PMS2-201ENST00000265849 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
PMS2-201ENST00000265849 CCDC173Q0VFZ6 552 aa15.14■□□□□ 0.01
PMS2-201ENST00000265849 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
PMS2-201ENST00000265849 TTC37Q6PGP7 1564 aa15.14■□□□□ 0.01
PMS2-201ENST00000265849 OFD1O75665 1012 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 RAB3GAP1Q15042 981 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 RIPK4P57078 832 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
PMS2-201ENST00000265849 ZSCAN30Q86W11 494 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 GBP4Q96PP9 640 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 BCL2L13Q9BXK5 485 aa15.13■□□□□ 0.01
PMS2-201ENST00000265849 MVPQ14764 893 aaKnown RBP15.12■□□□□ 0.01
PMS2-201ENST00000265849 SYCP2Q9BX26 1530 aa15.12■□□□□ 0.01
PMS2-201ENST00000265849 RBM25P49756 843 aaKnown RBP15.12■□□□□ 0.01
PMS2-201ENST00000265849 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
PMS2-201ENST00000265849 PRDM4Q9UKN5 801 aa15.12■□□□□ 0.01
PMS2-201ENST00000265849 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
PMS2-201ENST00000265849 TERF1P54274 439 aa15.11■□□□□ 0.01
PMS2-201ENST00000265849 TAF7LQ5H9L4 462 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 MRC2Q9UBG0 1479 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 PTMSP20962 102 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 KANK1Q14678 1352 aa15.1■□□□□ 0.01
PMS2-201ENST00000265849 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
PMS2-201ENST00000265849 CARD14Q9BXL6 1004 aa15.09■□□□□ 0.01
PMS2-201ENST00000265849 RRP7AQ9Y3A4 280 aaKnown RBP15.09■□□□□ 0.01
PMS2-201ENST00000265849 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
PMS2-201ENST00000265849 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
PMS2-201ENST00000265849 ERVK-7P63135 1459 aa15.08■□□□□ 0.01
PMS2-201ENST00000265849 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0.01
PMS2-201ENST00000265849 NASPP49321 788 aaPredicted RBP15.08■□□□□ 0.01
PMS2-201ENST00000265849 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0.01
PMS2-201ENST00000265849 NEUROD2Q15784 382 aa15.08■□□□□ 0
PMS2-201ENST00000265849 RUNDC1Q96C34 613 aa15.07■□□□□ 0
PMS2-201ENST00000265849 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
PMS2-201ENST00000265849 KIAA1210Q9ULL0 1709 aa15.07■□□□□ 0
PMS2-201ENST00000265849 HSP90AB1P08238 724 aaKnown RBP15.06■□□□□ 0
PMS2-201ENST00000265849 ZKSCAN2Q63HK3 967 aa15.06■□□□□ 0
PMS2-201ENST00000265849 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ 0
PMS2-201ENST00000265849 KIF2CQ99661 725 aa15.05■□□□□ -0
PMS2-201ENST00000265849 ARHGAP31Q2M1Z3 1444 aa15.05■□□□□ -0
PMS2-201ENST00000265849 TRPM2O94759 1503 aa15.05■□□□□ -0
PMS2-201ENST00000265849 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
PMS2-201ENST00000265849 CCDC27Q2M243 656 aa15.04■□□□□ -0
PMS2-201ENST00000265849 MAP7D2Q96T17 732 aa15.04■□□□□ -0
PMS2-201ENST00000265849 CLEC17AQ6ZS10 378 aa15.03■□□□□ -0
PMS2-201ENST00000265849 FTSJ3Q8IY81 847 aaKnown RBP15.03■□□□□ -0
PMS2-201ENST00000265849 CD2BP2O95400 341 aaKnown RBP15.03■□□□□ -0
PMS2-201ENST00000265849 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
PMS2-201ENST00000265849 CLTCL1P53675 1640 aa15.02■□□□□ -0
PMS2-201ENST00000265849 CFAP74Q9C0B2 1584 aa15.02■□□□□ -0
PMS2-201ENST00000265849 SSFA2P28290 1259 aa15.02■□□□□ -0
PMS2-201ENST00000265849 HS1BP3Q53T59 392 aa15.02■□□□□ -0
PMS2-201ENST00000265849 ANP32BQ92688 251 aaKnown RBP15.02□□□□□ -0.01
PMS2-201ENST00000265849 ZNF500O60304 480 aaPredicted RBP15.01□□□□□ -0.01
PMS2-201ENST00000265849 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
PMS2-201ENST00000265849 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
PMS2-201ENST00000265849 R3HCC1Q9Y3T6 440 aaKnown RBP15.01□□□□□ -0.01
PMS2-201ENST00000265849 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
PMS2-201ENST00000265849 EIF2AK3Q9NZJ5 1116 aaKnown RBP15□□□□□ -0.01
PMS2-201ENST00000265849 K7ELQ4 463 aaPredicted RBP15□□□□□ -0.01
PMS2-201ENST00000265849 TRIM27P14373 513 aa15□□□□□ -0.01
PMS2-201ENST00000265849 ZNF445P59923 1031 aa15□□□□□ -0.01
PMS2-201ENST00000265849 STAC3Q96MF2 364 aa15□□□□□ -0.01
PMS2-201ENST00000265849 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
PMS2-201ENST00000265849 FAM13BQ9NYF5 915 aa15□□□□□ -0.01
PMS2-201ENST00000265849 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
PMS2-201ENST00000265849 ARHGAP5Q13017 1502 aa15□□□□□ -0.01
PMS2-201ENST00000265849 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
PMS2-201ENST00000265849 ZNF518AQ6AHZ1 1483 aa14.99□□□□□ -0.01
PMS2-201ENST00000265849 PDLIM2Q96JY6 352 aa14.99□□□□□ -0.01
PMS2-201ENST00000265849 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
PMS2-201ENST00000265849 GOLGA6L22H0YM25 854 aa14.99□□□□□ -0.01
PMS2-201ENST00000265849 BAG4O95429 457 aaKnown RBP14.99□□□□□ -0.01
PMS2-201ENST00000265849 MYO3AQ8NEV4 1616 aa14.98□□□□□ -0.01
PMS2-201ENST00000265849 NUCB1Q02818 461 aa14.98□□□□□ -0.01
PMS2-201ENST00000265849 NCBP3Q53F19 620 aaKnown RBP14.98□□□□□ -0.01
PMS2-201ENST00000265849 AK9Q5TCS8 1911 aa14.98□□□□□ -0.01
PMS2-201ENST00000265849 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
PMS2-201ENST00000265849 CT47B1P0C2W7 299 aaPredicted RBP14.98□□□□□ -0.01
PMS2-201ENST00000265849 GAS2L2Q8NHY3 880 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms