RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 EVA1CP58658 441 aa18.49■□□□□ 0.55
PDLIM2-201ENST00000265810 ERICH6BQ5W0A0 696 aa18.49■□□□□ 0.55
PDLIM2-201ENST00000265810 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-201ENST00000265810 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
PDLIM2-201ENST00000265810 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-201ENST00000265810 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
PDLIM2-201ENST00000265810 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
PDLIM2-201ENST00000265810 PRKAR2BP31323 418 aa18.46■□□□□ 0.55
PDLIM2-201ENST00000265810 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
PDLIM2-201ENST00000265810 C1orf141Q5JVX7 400 aa18.46■□□□□ 0.55
PDLIM2-201ENST00000265810 NME9Q86XW9 330 aa18.44■□□□□ 0.54
PDLIM2-201ENST00000265810 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
PDLIM2-201ENST00000265810 TEFQ10587 303 aa18.44■□□□□ 0.54
PDLIM2-201ENST00000265810 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
PDLIM2-201ENST00000265810 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
PDLIM2-201ENST00000265810 HSP90AA1P07900 732 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-201ENST00000265810 RRP1P56182 461 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-201ENST00000265810 ARAP3Q8WWN8 1544 aa18.42■□□□□ 0.54
PDLIM2-201ENST00000265810 TCERG1O14776 1098 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-201ENST00000265810 FOXO3O43524 673 aa18.41■□□□□ 0.54
PDLIM2-201ENST00000265810 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
PDLIM2-201ENST00000265810 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
PDLIM2-201ENST00000265810 CHMP4AQ9BY43 222 aa18.4■□□□□ 0.54
PDLIM2-201ENST00000265810 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
PDLIM2-201ENST00000265810 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-201ENST00000265810 EIF2AK4Q9P2K8 1649 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-201ENST00000265810 MAGI2Q86UL8 1455 aa18.39■□□□□ 0.53
PDLIM2-201ENST00000265810 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
PDLIM2-201ENST00000265810 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
PDLIM2-201ENST00000265810 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
PDLIM2-201ENST00000265810 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
PDLIM2-201ENST00000265810 HSPA2P54652 639 aa18.37■□□□□ 0.53
PDLIM2-201ENST00000265810 APBB1O00213 710 aa18.37■□□□□ 0.53
PDLIM2-201ENST00000265810 GNAI1P63096 354 aa18.36■□□□□ 0.53
PDLIM2-201ENST00000265810 ZKSCAN2Q63HK3 967 aa18.36■□□□□ 0.53
PDLIM2-201ENST00000265810 ACEP12821 1306 aa18.36■□□□□ 0.53
PDLIM2-201ENST00000265810 RWDD1Q9H446 243 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-201ENST00000265810 AMER1Q5JTC6 1135 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-201ENST00000265810 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
PDLIM2-201ENST00000265810 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
PDLIM2-201ENST00000265810 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
PDLIM2-201ENST00000265810 YTHDC2Q9H6S0 1430 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-201ENST00000265810 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
PDLIM2-201ENST00000265810 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
PDLIM2-201ENST00000265810 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 UGGT1Q9NYU2 1555 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 NPHP1O15259 732 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 FBLN1P23142 703 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 TBX22Q9Y458 520 aa18.33■□□□□ 0.53
PDLIM2-201ENST00000265810 KCNA6P17658 529 aa18.33■□□□□ 0.52
PDLIM2-201ENST00000265810 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
PDLIM2-201ENST00000265810 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.52
PDLIM2-201ENST00000265810 USP35Q9P2H5 1018 aa18.33■□□□□ 0.52
PDLIM2-201ENST00000265810 PLA2R1Q13018 1463 aa18.32■□□□□ 0.52
PDLIM2-201ENST00000265810 PLXNC1O60486 1568 aa18.32■□□□□ 0.52
PDLIM2-201ENST00000265810 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
PDLIM2-201ENST00000265810 FYB1O15117 783 aa18.31■□□□□ 0.52
PDLIM2-201ENST00000265810 LTKP29376 864 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 FCHSD2O94868 740 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 SPATA31E1Q6ZUB1 1445 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-201ENST00000265810 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
PDLIM2-201ENST00000265810 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
PDLIM2-201ENST00000265810 PTPRTO14522 1441 aa18.29■□□□□ 0.52
PDLIM2-201ENST00000265810 TTC5Q8N0Z6 440 aa18.28■□□□□ 0.52
PDLIM2-201ENST00000265810 PER1O15534 1290 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-201ENST00000265810 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-201ENST00000265810 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
PDLIM2-201ENST00000265810 PRDM15P57071 1507 aaPredicted RBP18.27■□□□□ 0.52
PDLIM2-201ENST00000265810 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-201ENST00000265810 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
PDLIM2-201ENST00000265810 KCNH5Q8NCM2 988 aa18.27■□□□□ 0.51
PDLIM2-201ENST00000265810 CASC1Q6TDU7 716 aa18.27■□□□□ 0.51
PDLIM2-201ENST00000265810 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.51
PDLIM2-201ENST00000265810 TRPM2O94759 1503 aa18.26■□□□□ 0.51
PDLIM2-201ENST00000265810 NSD2O96028 1365 aa18.26■□□□□ 0.51
PDLIM2-201ENST00000265810 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
PDLIM2-201ENST00000265810 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-201ENST00000265810 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 SYTL4Q96C24 671 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 PIP4K2BP78356 416 aa18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 WWC1Q8IX03 1113 aa18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 COL17A1Q9UMD9 1497 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
PDLIM2-201ENST00000265810 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
PDLIM2-201ENST00000265810 TTC21BQ7Z4L5 1316 aa18.24■□□□□ 0.51
PDLIM2-201ENST00000265810 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
PDLIM2-201ENST00000265810 ABCC3O15438 1527 aa18.23■□□□□ 0.51
PDLIM2-201ENST00000265810 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms