RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 RILPL2Q969X0 211 aa12.19□□□□□ -0.46
ABCB1-201ENST00000265724 GZF1Q9H116 711 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
ABCB1-201ENST00000265724 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
ABCB1-201ENST00000265724 NOL8Q76FK4 1167 aaKnown RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
ABCB1-201ENST00000265724 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
ABCB1-201ENST00000265724 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
ABCB1-201ENST00000265724 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
ABCB1-201ENST00000265724 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
ABCB1-201ENST00000265724 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
ABCB1-201ENST00000265724 TCOF1Q13428 1488 aaKnown RBP12.18□□□□□ -0.46
ABCB1-201ENST00000265724 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
ABCB1-201ENST00000265724 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
ABCB1-201ENST00000265724 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
ABCB1-201ENST00000265724 ASXL2Q76L83 1435 aa12.17□□□□□ -0.46
ABCB1-201ENST00000265724 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
ABCB1-201ENST00000265724 RRS1Q15050 365 aaKnown RBP12.17□□□□□ -0.46
ABCB1-201ENST00000265724 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
ABCB1-201ENST00000265724 NOS1P29475 1434 aa12.17□□□□□ -0.46
ABCB1-201ENST00000265724 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
ABCB1-201ENST00000265724 DISP1Q96F81 1524 aa12.16□□□□□ -0.46
ABCB1-201ENST00000265724 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
ABCB1-201ENST00000265724 FANCIQ9NVI1 1328 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 AAMPQ13685 434 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 GAS2L2Q8NHY3 880 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 KDM5BQ9UGL1 1544 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 TRAPPC8Q9Y2L5 1435 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
ABCB1-201ENST00000265724 WDR63Q8IWG1 891 aa12.15□□□□□ -0.46
ABCB1-201ENST00000265724 ST18O60284 1047 aa12.15□□□□□ -0.47
ABCB1-201ENST00000265724 NUP160Q12769 1436 aa12.15□□□□□ -0.47
ABCB1-201ENST00000265724 DISP3Q9P2K9 1392 aa12.14□□□□□ -0.47
ABCB1-201ENST00000265724 SCAF11Q99590 1463 aaKnown RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
ABCB1-201ENST00000265724 ABCA5Q8WWZ7 1642 aa12.13□□□□□ -0.47
ABCB1-201ENST00000265724 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
ABCB1-201ENST00000265724 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
ABCB1-201ENST00000265724 SYTL4Q96C24 671 aaPredicted RBP12.12□□□□□ -0.47
ABCB1-201ENST00000265724 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
ABCB1-201ENST00000265724 DUOX2Q9NRD8 1548 aa12.12□□□□□ -0.47
ABCB1-201ENST00000265724 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
ABCB1-201ENST00000265724 WDR7Q9Y4E6 1490 aa12.12□□□□□ -0.47
ABCB1-201ENST00000265724 AIMP1Q12904 312 aaKnown RBP12.11□□□□□ -0.47
ABCB1-201ENST00000265724 FCHSD2O94868 740 aa12.11□□□□□ -0.47
ABCB1-201ENST00000265724 TMPOP42166 694 aaKnown RBP12.11□□□□□ -0.47
ABCB1-201ENST00000265724 GNL2Q13823 731 aaKnown RBP12.1□□□□□ -0.47
ABCB1-201ENST00000265724 C1orf115Q9H7X2 142 aa12.1□□□□□ -0.47
ABCB1-201ENST00000265724 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 PTMSP20962 102 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 PLEKHO1Q53GL0 409 aaPredicted RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 FOXD4L5Q5VV16 416 aaPredicted RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 FOXD4L4Q8WXT5 416 aaPredicted RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 PBRM1Q86U86 1689 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 REC8O95072 547 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 A2MP01023 1474 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 NME9Q86XW9 330 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 PDZRN3Q9UPQ7 1066 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 UBTFL1P0CB47 393 aaPredicted RBP12.09□□□□□ -0.47
ABCB1-201ENST00000265724 ATF7IPQ6VMQ6 1270 aa12.09□□□□□ -0.47
ABCB1-201ENST00000265724 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.47
ABCB1-201ENST00000265724 XPCQ01831 940 aaPredicted RBP12.08□□□□□ -0.48
ABCB1-201ENST00000265724 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
ABCB1-201ENST00000265724 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
ABCB1-201ENST00000265724 SLC4A2P04920 1241 aa12.08□□□□□ -0.48
ABCB1-201ENST00000265724 WASLO00401 505 aaPredicted RBP12.08□□□□□ -0.48
ABCB1-201ENST00000265724 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
ABCB1-201ENST00000265724 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
ABCB1-201ENST00000265724 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
ABCB1-201ENST00000265724 PRAG1Q86YV5 1406 aa12.08□□□□□ -0.48
ABCB1-201ENST00000265724 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
ABCB1-201ENST00000265724 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
ABCB1-201ENST00000265724 PPP6R1Q9UPN7 881 aa12.07□□□□□ -0.48
ABCB1-201ENST00000265724 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
ABCB1-201ENST00000265724 ZNF518AQ6AHZ1 1483 aa12.07□□□□□ -0.48
ABCB1-201ENST00000265724 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
ABCB1-201ENST00000265724 ANO2Q9NQ90 1003 aa12.07□□□□□ -0.48
ABCB1-201ENST00000265724 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
ABCB1-201ENST00000265724 SAMD9Q5K651 1589 aa12.06□□□□□ -0.48
ABCB1-201ENST00000265724 HDGFL1Q5TGJ6 251 aa12.06□□□□□ -0.48
ABCB1-201ENST00000265724 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
ABCB1-201ENST00000265724 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
ABCB1-201ENST00000265724 GNAI3P08754 354 aa12.06□□□□□ -0.48
ABCB1-201ENST00000265724 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
ABCB1-201ENST00000265724 CDK11BP21127 795 aaKnown RBP12.05□□□□□ -0.48
ABCB1-201ENST00000265724 SHANK2Q9UPX8 1470 aa12.05□□□□□ -0.48
ABCB1-201ENST00000265724 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms