RNA–Protein interactions for RNA: ENST00000264993.7

CDV3-201, Transcript of CDV3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDV3, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-201ENST00000264993 PDCL3Q9H2J4 239 aa25.24■■□□□ 1.63
CDV3-201ENST00000264993 CAVIN1Q6NZI2 390 aaKnown RBP25.24■■□□□ 1.63
CDV3-201ENST00000264993 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
CDV3-201ENST00000264993 GBP4Q96PP9 640 aa25.23■■□□□ 1.63
CDV3-201ENST00000264993 CCDC144AA2RUR9 1427 aa25.23■■□□□ 1.63
CDV3-201ENST00000264993 BCL11BQ9C0K0 894 aaPredicted RBP25.23■■□□□ 1.63
CDV3-201ENST00000264993 PLCH2O75038 1416 aa25.22■■□□□ 1.63
CDV3-201ENST00000264993 ERBINQ96RT1 1412 aa25.22■■□□□ 1.63
CDV3-201ENST00000264993 KIF13AQ9H1H9 1805 aa25.22■■□□□ 1.63
CDV3-201ENST00000264993 MBD5Q9P267 1494 aa25.22■■□□□ 1.63
CDV3-201ENST00000264993 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
CDV3-201ENST00000264993 MCTP1Q6DN14 999 aa25.22■■□□□ 1.63
CDV3-201ENST00000264993 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
CDV3-201ENST00000264993 RARSP54136 660 aaKnown RBP25.21■■□□□ 1.63
CDV3-201ENST00000264993 PDE3AQ14432 1141 aa25.21■■□□□ 1.63
CDV3-201ENST00000264993 SMC4Q9NTJ3 1288 aa25.21■■□□□ 1.63
CDV3-201ENST00000264993 CFAP74Q9C0B2 1584 aa25.2■■□□□ 1.63
CDV3-201ENST00000264993 UQCRHLA0A096LP55 91 aa25.2■■□□□ 1.62
CDV3-201ENST00000264993 APBB1O00213 710 aa25.2■■□□□ 1.62
CDV3-201ENST00000264993 CD2BP2O95400 341 aaKnown RBP25.2■■□□□ 1.62
CDV3-201ENST00000264993 UQCRHP07919 91 aa25.2■■□□□ 1.62
CDV3-201ENST00000264993 TPM2P07951 284 aa25.2■■□□□ 1.62
CDV3-201ENST00000264993 C1orf115Q9H7X2 142 aa25.2■■□□□ 1.62
CDV3-201ENST00000264993 ZNF521Q96K83 1311 aa25.19■■□□□ 1.62
CDV3-201ENST00000264993 TCP11L2Q8N4U5 519 aa25.19■■□□□ 1.62
CDV3-201ENST00000264993 PTMAP06454 111 aaKnown RBP25.17■■□□□ 1.62
CDV3-201ENST00000264993 RBM27Q9P2N5 1060 aaKnown RBP25.17■■□□□ 1.62
CDV3-201ENST00000264993 SAMD9LQ8IVG5 1584 aa25.17■■□□□ 1.62
CDV3-201ENST00000264993 RIPK4P57078 832 aa25.16■■□□□ 1.62
CDV3-201ENST00000264993 GOLGA6L22H0YM25 854 aa25.15■■□□□ 1.62
CDV3-201ENST00000264993 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
CDV3-201ENST00000264993 CHGAP10645 457 aaKnown RBP25.15■■□□□ 1.62
CDV3-201ENST00000264993 ZSCAN30Q86W11 494 aa25.15■■□□□ 1.62
CDV3-201ENST00000264993 ARHGEF5Q12774 1597 aa25.14■■□□□ 1.62
CDV3-201ENST00000264993 NOL8Q76FK4 1167 aaKnown RBP25.14■■□□□ 1.62
CDV3-201ENST00000264993 IGSF3O75054 1194 aa25.14■■□□□ 1.61
CDV3-201ENST00000264993 PPRC1Q5VV67 1664 aaKnown RBP25.13■■□□□ 1.61
CDV3-201ENST00000264993 U2AF1L5P0DN76 240 aaPredicted RBP25.13■■□□□ 1.61
CDV3-201ENST00000264993 PLCB2Q00722 1185 aa25.13■■□□□ 1.61
CDV3-201ENST00000264993 U2AF1Q01081 240 aaKnown RBP eCLIP25.13■■□□□ 1.61
CDV3-201ENST00000264993 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
CDV3-201ENST00000264993 CROCC2H7BZ55 1655 aa25.13■■□□□ 1.61
CDV3-201ENST00000264993 POLR1AO95602 1720 aaPredicted RBP25.13■■□□□ 1.61
CDV3-201ENST00000264993 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
CDV3-201ENST00000264993 PLEKHH2Q8IVE3 1493 aa25.12■■□□□ 1.61
CDV3-201ENST00000264993 ARHGAP5Q13017 1502 aa25.11■■□□□ 1.61
CDV3-201ENST00000264993 ELL2O00472 640 aaPredicted RBP25.11■■□□□ 1.61
CDV3-201ENST00000264993 ANKRD45Q5TZF3 282 aa25.11■■□□□ 1.61
CDV3-201ENST00000264993 ABCC1P33527 1531 aa25.1■■□□□ 1.61
CDV3-201ENST00000264993 MAPK8IP2Q13387 824 aaPredicted RBP25.1■■□□□ 1.61
CDV3-201ENST00000264993 DZIP1LQ8IYY4 767 aaKnown RBP25.1■■□□□ 1.61
CDV3-201ENST00000264993 CALD1Q05682 793 aaKnown RBP25.08■■□□□ 1.61
CDV3-201ENST00000264993 GAS2L2Q8NHY3 880 aa25.07■■□□□ 1.6
CDV3-201ENST00000264993 CD109Q6YHK3 1445 aa25.07■■□□□ 1.6
CDV3-201ENST00000264993 NEO1Q92859 1461 aa25.07■■□□□ 1.6
CDV3-201ENST00000264993 SAFB2Q14151 953 aaKnown RBP eCLIP25.07■■□□□ 1.6
CDV3-201ENST00000264993 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
CDV3-201ENST00000264993 NLRP1Q9C000 1473 aa25.07■■□□□ 1.6
CDV3-201ENST00000264993 CCDC173Q0VFZ6 552 aa25.06■■□□□ 1.6
CDV3-201ENST00000264993 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.06■■□□□ 1.6
CDV3-201ENST00000264993 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
CDV3-201ENST00000264993 PRPF40AO75400 957 aaKnown RBP25.06■■□□□ 1.6
CDV3-201ENST00000264993 ZKSCAN2Q63HK3 967 aa25.06■■□□□ 1.6
CDV3-201ENST00000264993 PKP1Q13835 747 aa25.06■■□□□ 1.6
CDV3-201ENST00000264993 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
CDV3-201ENST00000264993 MVPQ14764 893 aaKnown RBP25.05■■□□□ 1.6
CDV3-201ENST00000264993 CBX1P83916 185 aa25.04■■□□□ 1.6
CDV3-201ENST00000264993 EXOSC9Q06265 439 aaKnown RBP25.04■■□□□ 1.6
CDV3-201ENST00000264993 FANCAO15360 1455 aa25.04■■□□□ 1.6
CDV3-201ENST00000264993 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
CDV3-201ENST00000264993 TRMT2AQ8IZ69 625 aaKnown RBP25.04■■□□□ 1.6
CDV3-201ENST00000264993 ZNF830Q96NB3 372 aaPredicted RBP25.04■■□□□ 1.6
CDV3-201ENST00000264993 MAST1Q9Y2H9 1570 aa25.03■■□□□ 1.6
CDV3-201ENST00000264993 C9orf84Q5VXU9 1444 aa25.02■■□□□ 1.6
CDV3-201ENST00000264993 OFD1O75665 1012 aa25.02■■□□□ 1.6
CDV3-201ENST00000264993 ZNF692Q9BU19 519 aaPredicted RBP25.02■■□□□ 1.6
CDV3-201ENST00000264993 RBSNQ9H1K0 784 aa25.01■■□□□ 1.59
CDV3-201ENST00000264993 C17orf53Q8N3J3 647 aaPredicted RBP25.01■■□□□ 1.59
CDV3-201ENST00000264993 PRIM1P49642 420 aaKnown RBP25■■□□□ 1.59
CDV3-201ENST00000264993 TMEM57Q8N5G2 664 aa25■■□□□ 1.59
CDV3-201ENST00000264993 NOB1Q9ULX3 412 aaKnown RBP25■■□□□ 1.59
CDV3-201ENST00000264993 ADGBQ8N7X0 1667 aa25■■□□□ 1.59
CDV3-201ENST00000264993 CARD14Q9BXL6 1004 aa24.99■■□□□ 1.59
CDV3-201ENST00000264993 COL17A1Q9UMD9 1497 aaPredicted RBP24.99■■□□□ 1.59
CDV3-201ENST00000264993 SYCP2Q9BX26 1530 aa24.99■■□□□ 1.59
CDV3-201ENST00000264993 SYCE3A1L190 88 aa24.99■■□□□ 1.59
CDV3-201ENST00000264993 TRIM27P14373 513 aa24.99■■□□□ 1.59
CDV3-201ENST00000264993 MTHFSP49914 203 aa24.99■■□□□ 1.59
CDV3-201ENST00000264993 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
CDV3-201ENST00000264993 PRDM4Q9UKN5 801 aa24.98■■□□□ 1.59
CDV3-201ENST00000264993 BAG4O95429 457 aaKnown RBP24.97■■□□□ 1.59
CDV3-201ENST00000264993 CFAP70Q5T0N1 1121 aa24.97■■□□□ 1.59
CDV3-201ENST00000264993 SLC12A5Q9H2X9 1139 aa24.97■■□□□ 1.59
CDV3-201ENST00000264993 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
CDV3-201ENST00000264993 SSH1Q8WYL5 1049 aa24.96■■□□□ 1.59
CDV3-201ENST00000264993 SPDYE4A6NLX3 237 aa24.96■■□□□ 1.59
CDV3-201ENST00000264993 RAB3GAP1Q15042 981 aa24.96■■□□□ 1.59
CDV3-201ENST00000264993 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
CDV3-201ENST00000264993 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
CDV3-201ENST00000264993 SKOR2Q2VWA4 1001 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms