RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 IDI1Q13907 227 aa10.55□□□□□ -0.72
SMARCE1-201ENST00000264640 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-201ENST00000264640 EP400Q96L91 3159 aa10.54□□□□□ -0.72
SMARCE1-201ENST00000264640 KIF15Q9NS87 1388 aa10.53□□□□□ -0.72
SMARCE1-201ENST00000264640 C7P10643 843 aa10.53□□□□□ -0.72
SMARCE1-201ENST00000264640 METRNQ9UJH8 293 aa10.53□□□□□ -0.72
SMARCE1-201ENST00000264640 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
SMARCE1-201ENST00000264640 ERBINQ96RT1 1412 aa10.52□□□□□ -0.73
SMARCE1-201ENST00000264640 SLC39A7Q92504 469 aa10.52□□□□□ -0.73
SMARCE1-201ENST00000264640 KIF12Q96FN5 646 aa10.52□□□□□ -0.73
SMARCE1-201ENST00000264640 C8orf37Q96NL8 207 aa10.52□□□□□ -0.73
SMARCE1-201ENST00000264640 ZFYVE9O95405 1425 aa10.51□□□□□ -0.73
SMARCE1-201ENST00000264640 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-201ENST00000264640 TMEM131LA2VDJ0 1609 aa10.51□□□□□ -0.73
SMARCE1-201ENST00000264640 ATAD2Q6PL18 1390 aa10.51□□□□□ -0.73
SMARCE1-201ENST00000264640 PLEKHG1Q9ULL1 1385 aa10.51□□□□□ -0.73
SMARCE1-201ENST00000264640 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 ATF3P18847 181 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 RBM6P78332 1123 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 BRINP3Q76B58 766 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 RRP7BPQ9NSQ0 103 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 KANK1Q14678 1352 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 NOS1P29475 1434 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
SMARCE1-201ENST00000264640 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-201ENST00000264640 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
SMARCE1-201ENST00000264640 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
SMARCE1-201ENST00000264640 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
SMARCE1-201ENST00000264640 SETD5Q9C0A6 1442 aa10.48□□□□□ -0.73
SMARCE1-201ENST00000264640 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
SMARCE1-201ENST00000264640 MIER1Q8N108 512 aa10.47□□□□□ -0.73
SMARCE1-201ENST00000264640 CCER1Q8TC90 406 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-201ENST00000264640 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-201ENST00000264640 ADAMTS13Q76LX8 1427 aa10.47□□□□□ -0.73
SMARCE1-201ENST00000264640 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
SMARCE1-201ENST00000264640 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
SMARCE1-201ENST00000264640 ADAMTS2O95450 1211 aa10.46□□□□□ -0.73
SMARCE1-201ENST00000264640 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-201ENST00000264640 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
SMARCE1-201ENST00000264640 PNPLA6Q8IY17 1366 aa10.46□□□□□ -0.74
SMARCE1-201ENST00000264640 ABCC5O15440 1437 aa10.46□□□□□ -0.74
SMARCE1-201ENST00000264640 PTPN23Q9H3S7 1636 aa10.46□□□□□ -0.74
SMARCE1-201ENST00000264640 XRN1Q8IZH2 1706 aaKnown RBP10.46□□□□□ -0.74
SMARCE1-201ENST00000264640 LRP5O75197 1615 aa10.45□□□□□ -0.74
SMARCE1-201ENST00000264640 TRPM2O94759 1503 aa10.45□□□□□ -0.74
SMARCE1-201ENST00000264640 MST1RQ04912 1400 aa10.45□□□□□ -0.74
SMARCE1-201ENST00000264640 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
SMARCE1-201ENST00000264640 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-201ENST00000264640 UNC13BO14795 1591 aa10.44□□□□□ -0.74
SMARCE1-201ENST00000264640 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
SMARCE1-201ENST00000264640 NGLY1Q96IV0 654 aa10.44□□□□□ -0.74
SMARCE1-201ENST00000264640 BRWD3Q6RI45 1802 aa10.43□□□□□ -0.74
SMARCE1-201ENST00000264640 TBX22Q9Y458 520 aa10.43□□□□□ -0.74
SMARCE1-201ENST00000264640 NRXN3Q9Y4C0 1643 aa10.43□□□□□ -0.74
SMARCE1-201ENST00000264640 DCCP43146 1447 aa10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 DAPK1P53355 1430 aa10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 VPS8Q8N3P4 1428 aa10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 MAP3K13O43283 966 aa10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 SLC52A1Q9NWF4 448 aa10.42□□□□□ -0.74
SMARCE1-201ENST00000264640 E9PCH4 1651 aa10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 KANK4Q5T7N3 995 aaPredicted RBP10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 MAMSTRQ6ZN01 415 aa10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 USP21Q9UK80 565 aa10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 RPRD2Q5VT52 1461 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-201ENST00000264640 TIE1P35590 1138 aa10.4□□□□□ -0.74
SMARCE1-201ENST00000264640 CHIC2Q9UKJ5 165 aa10.4□□□□□ -0.74
SMARCE1-201ENST00000264640 AMOTL2Q9Y2J4 779 aa10.4□□□□□ -0.74
SMARCE1-201ENST00000264640 ATRNO75882 1429 aa10.4□□□□□ -0.75
SMARCE1-201ENST00000264640 LAMC1P11047 1609 aa10.4□□□□□ -0.75
SMARCE1-201ENST00000264640 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
SMARCE1-201ENST00000264640 PLSCR2Q9NRY7 297 aa10.39□□□□□ -0.75
SMARCE1-201ENST00000264640 COL22A1Q8NFW1 1626 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-201ENST00000264640 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
SMARCE1-201ENST00000264640 POTEMA6NI47 508 aa10.38□□□□□ -0.75
SMARCE1-201ENST00000264640 TRPC5Q9UL62 973 aaPredicted RBP10.38□□□□□ -0.75
SMARCE1-201ENST00000264640 ANKRD30AQ9BXX3 1397 aa10.38□□□□□ -0.75
SMARCE1-201ENST00000264640 HDGFP51858 240 aaKnown RBP10.37□□□□□ -0.75
SMARCE1-201ENST00000264640 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
SMARCE1-201ENST00000264640 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-201ENST00000264640 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
SMARCE1-201ENST00000264640 DEFB132Q7Z7B7 95 aa10.36□□□□□ -0.75
SMARCE1-201ENST00000264640 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMARCE1-201ENST00000264640 GLI3P10071 1580 aa10.35□□□□□ -0.75
SMARCE1-201ENST00000264640 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
SMARCE1-201ENST00000264640 SGIP1Q9BQI5 828 aa10.35□□□□□ -0.75
SMARCE1-201ENST00000264640 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
SMARCE1-201ENST00000264640 BLMP54132 1417 aaPredicted RBP10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 PTCH1Q13635 1447 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 SPHKAPQ2M3C7 1700 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 NUBP1P53384 320 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 C1orf167Q5SNV9 1468 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 BCL9LQ86UU0 1499 aa10.34□□□□□ -0.75
SMARCE1-201ENST00000264640 PSDA5PKW4 1024 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-201ENST00000264640 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-201ENST00000264640 METP08581 1390 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms