RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 UHRF1BP1Q6BDS2 1440 aa15.86■□□□□ 0.13
HERC6-201ENST00000264346 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
HERC6-201ENST00000264346 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
HERC6-201ENST00000264346 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
HERC6-201ENST00000264346 NCLP19338 710 aaKnown RBP15.85■□□□□ 0.13
HERC6-201ENST00000264346 PLEKHH1Q9ULM0 1364 aa15.85■□□□□ 0.13
HERC6-201ENST00000264346 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
HERC6-201ENST00000264346 EID1Q9Y6B2 187 aa15.84■□□□□ 0.13
HERC6-201ENST00000264346 ABCA8O94911 1581 aa15.84■□□□□ 0.13
HERC6-201ENST00000264346 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
HERC6-201ENST00000264346 C14orf93Q9H972 538 aaKnown RBP15.83■□□□□ 0.13
HERC6-201ENST00000264346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.12
HERC6-201ENST00000264346 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
HERC6-201ENST00000264346 ARHGEF12Q9NZN5 1544 aa15.82■□□□□ 0.12
HERC6-201ENST00000264346 HSCBQ8IWL3 235 aa15.82■□□□□ 0.12
HERC6-201ENST00000264346 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
HERC6-201ENST00000264346 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
HERC6-201ENST00000264346 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
HERC6-201ENST00000264346 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
HERC6-201ENST00000264346 WDR7Q9Y4E6 1490 aa15.81■□□□□ 0.12
HERC6-201ENST00000264346 NOB1Q9ULX3 412 aaKnown RBP15.8■□□□□ 0.12
HERC6-201ENST00000264346 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
HERC6-201ENST00000264346 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
HERC6-201ENST00000264346 LRPPRCP42704 1394 aaKnown RBP15.79■□□□□ 0.12
HERC6-201ENST00000264346 TTC37Q6PGP7 1564 aa15.78■□□□□ 0.12
HERC6-201ENST00000264346 TMPOP42166 694 aaKnown RBP15.78■□□□□ 0.12
HERC6-201ENST00000264346 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
HERC6-201ENST00000264346 DDX19BQ9UMR2 479 aa15.78■□□□□ 0.12
HERC6-201ENST00000264346 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
HERC6-201ENST00000264346 RARSP54136 660 aaKnown RBP15.78■□□□□ 0.12
HERC6-201ENST00000264346 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
HERC6-201ENST00000264346 PLA2R1Q13018 1463 aa15.77■□□□□ 0.12
HERC6-201ENST00000264346 EMILIN1Q9Y6C2 1016 aa15.77■□□□□ 0.12
HERC6-201ENST00000264346 IGHDP01880 384 aa15.77■□□□□ 0.11
HERC6-201ENST00000264346 CEBPAP49715 358 aaPredicted RBP15.77■□□□□ 0.11
HERC6-201ENST00000264346 NME9Q86XW9 330 aa15.77■□□□□ 0.11
HERC6-201ENST00000264346 CHMP4BQ9H444 224 aaKnown RBP15.77■□□□□ 0.11
HERC6-201ENST00000264346 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.11
HERC6-201ENST00000264346 OS9Q13438 667 aaPredicted RBP15.76■□□□□ 0.11
HERC6-201ENST00000264346 CDC42BPAQ5VT25 1732 aa15.76■□□□□ 0.11
HERC6-201ENST00000264346 GSE1Q14687 1217 aa15.76■□□□□ 0.11
HERC6-201ENST00000264346 RBM33Q96EV2 1170 aaKnown RBP15.76■□□□□ 0.11
HERC6-201ENST00000264346 BCORL1Q5H9F3 1711 aa15.75■□□□□ 0.11
HERC6-201ENST00000264346 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
HERC6-201ENST00000264346 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
HERC6-201ENST00000264346 SSH1Q8WYL5 1049 aa15.75■□□□□ 0.11
HERC6-201ENST00000264346 KDM5CP41229 1560 aa15.74■□□□□ 0.11
HERC6-201ENST00000264346 NFKBIBQ15653 356 aa15.74■□□□□ 0.11
HERC6-201ENST00000264346 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
HERC6-201ENST00000264346 NOL8Q76FK4 1167 aaKnown RBP15.74■□□□□ 0.11
HERC6-201ENST00000264346 STK31Q9BXU1 1019 aa15.74■□□□□ 0.11
HERC6-201ENST00000264346 CASC1Q6TDU7 716 aa15.74■□□□□ 0.11
HERC6-201ENST00000264346 WDR63Q8IWG1 891 aa15.74■□□□□ 0.11
HERC6-201ENST00000264346 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
HERC6-201ENST00000264346 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
HERC6-201ENST00000264346 NAP1L5Q96NT1 182 aaPredicted RBP15.73■□□□□ 0.11
HERC6-201ENST00000264346 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
HERC6-201ENST00000264346 ZNF428Q96B54 188 aa15.73■□□□□ 0.11
HERC6-201ENST00000264346 UGGT1Q9NYU2 1555 aa15.72■□□□□ 0.11
HERC6-201ENST00000264346 RTEL1-TNFRSF6BF6WH68 1400 aa15.72■□□□□ 0.11
HERC6-201ENST00000264346 ASXL1Q8IXJ9 1541 aa15.72■□□□□ 0.11
HERC6-201ENST00000264346 NKTRP30414 1462 aaKnown RBP15.72■□□□□ 0.11
HERC6-201ENST00000264346 FRAT2O75474 233 aaPredicted RBP15.72■□□□□ 0.11
HERC6-201ENST00000264346 NLRP6P59044 892 aa15.72■□□□□ 0.11
HERC6-201ENST00000264346 ANP32BQ92688 251 aaKnown RBP15.72■□□□□ 0.11
HERC6-201ENST00000264346 NUDT16Q96DE0 195 aaKnown RBP15.72■□□□□ 0.11
HERC6-201ENST00000264346 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
HERC6-201ENST00000264346 EIF2S2P20042 333 aaKnown RBP15.71■□□□□ 0.11
HERC6-201ENST00000264346 TMEM57Q8N5G2 664 aa15.71■□□□□ 0.11
HERC6-201ENST00000264346 FYB1O15117 783 aa15.71■□□□□ 0.11
HERC6-201ENST00000264346 ATF7IPQ6VMQ6 1270 aa15.71■□□□□ 0.11
HERC6-201ENST00000264346 GPRASP1Q5JY77 1395 aa15.71■□□□□ 0.1
HERC6-201ENST00000264346 GNAI1P63096 354 aa15.71■□□□□ 0.1
HERC6-201ENST00000264346 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.1
HERC6-201ENST00000264346 CHD1O14646 1710 aa15.7■□□□□ 0.1
HERC6-201ENST00000264346 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
HERC6-201ENST00000264346 RLBP1P12271 317 aa15.7■□□□□ 0.1
HERC6-201ENST00000264346 TWISTNBQ3B726 338 aaPredicted RBP15.7■□□□□ 0.1
HERC6-201ENST00000264346 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.7■□□□□ 0.1
HERC6-201ENST00000264346 MAGI2Q86UL8 1455 aa15.7■□□□□ 0.1
HERC6-201ENST00000264346 KIF16BQ96L93 1317 aa15.7■□□□□ 0.1
HERC6-201ENST00000264346 TRIM6-TRIM34B2RNG4 842 aa15.69■□□□□ 0.1
HERC6-201ENST00000264346 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
HERC6-201ENST00000264346 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
HERC6-201ENST00000264346 ARHGEF5Q12774 1597 aa15.69■□□□□ 0.1
HERC6-201ENST00000264346 MAST1Q9Y2H9 1570 aa15.69■□□□□ 0.1
HERC6-201ENST00000264346 PCDHB15Q9Y5E8 787 aa15.69■□□□□ 0.1
HERC6-201ENST00000264346 FAM83GA6ND36 823 aa15.68■□□□□ 0.1
HERC6-201ENST00000264346 GOLGA6L22H0YM25 854 aa15.68■□□□□ 0.1
HERC6-201ENST00000264346 TAOK2Q9UL54 1235 aa15.68■□□□□ 0.1
HERC6-201ENST00000264346 ZNF518AQ6AHZ1 1483 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 CCDC61Q9Y6R9 512 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 RNF123Q5XPI4 1314 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 C22orf23Q9BZE7 217 aa15.67■□□□□ 0.1
HERC6-201ENST00000264346 MCM10Q7L590 875 aa15.66■□□□□ 0.1
HERC6-201ENST00000264346 ATP10AO60312 1499 aa15.66■□□□□ 0.1
HERC6-201ENST00000264346 TRIM27P14373 513 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms