RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 KTN1Q86UP2 1357 aaKnown RBP32.71■■■□□ 2.83
EPCAM-201ENST00000263735 PTPRUQ92729 1446 aa32.71■■■□□ 2.83
EPCAM-201ENST00000263735 PLEKHH1Q9ULM0 1364 aa32.71■■■□□ 2.83
EPCAM-201ENST00000263735 ADGRB2O60241 1585 aa32.7■■■□□ 2.83
EPCAM-201ENST00000263735 MINK1Q8N4C8 1332 aaPredicted RBP32.7■■■□□ 2.82
EPCAM-201ENST00000263735 PTCH1Q13635 1447 aa32.68■■■□□ 2.82
EPCAM-201ENST00000263735 WAPLQ7Z5K2 1190 aa32.68■■■□□ 2.82
EPCAM-201ENST00000263735 KDM4FA0A1W2PPD8 638 aa32.67■■■□□ 2.82
EPCAM-201ENST00000263735 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.66■■■□□ 2.82
EPCAM-201ENST00000263735 ROBO2Q9HCK4 1378 aa32.65■■■□□ 2.82
EPCAM-201ENST00000263735 NINLQ9Y2I6 1382 aa32.65■■■□□ 2.82
EPCAM-201ENST00000263735 ATAD2Q6PL18 1390 aa32.64■■■□□ 2.82
EPCAM-201ENST00000263735 NPHP4O75161 1426 aaPredicted RBP32.64■■■□□ 2.82
EPCAM-201ENST00000263735 USP32Q8NFA0 1604 aa32.63■■■□□ 2.81
EPCAM-201ENST00000263735 SRPK2P78362 688 aaKnown RBP32.6■■■□□ 2.81
EPCAM-201ENST00000263735 CABP2Q9NPB3 220 aa32.6■■■□□ 2.81
EPCAM-201ENST00000263735 AMOTL2Q9Y2J4 779 aa32.6■■■□□ 2.81
EPCAM-201ENST00000263735 RALBP1Q15311 655 aa32.59■■■□□ 2.81
EPCAM-201ENST00000263735 KNSTRNQ9Y448 316 aa32.59■■■□□ 2.81
EPCAM-201ENST00000263735 PARD3Q8TEW0 1356 aa32.58■■■□□ 2.81
EPCAM-201ENST00000263735 NPC1L1Q9UHC9 1359 aa32.57■■■□□ 2.8
EPCAM-201ENST00000263735 CDK19Q9BWU1 502 aa32.57■■■□□ 2.8
EPCAM-201ENST00000263735 TMC1Q8TDI8 760 aa32.56■■■□□ 2.8
EPCAM-201ENST00000263735 ANKRD36BQ8N2N9 1353 aa32.55■■■□□ 2.8
EPCAM-201ENST00000263735 SLC12A5Q9H2X9 1139 aa32.54■■■□□ 2.8
EPCAM-201ENST00000263735 NWD1Q149M9 1564 aa32.53■■■□□ 2.8
EPCAM-201ENST00000263735 WASLO00401 505 aaPredicted RBP32.52■■■□□ 2.8
EPCAM-201ENST00000263735 TOPAZ1Q8N9V7 1692 aa32.51■■■□□ 2.79
EPCAM-201ENST00000263735 CNGB1Q14028 1251 aaPredicted RBP32.51■■■□□ 2.79
EPCAM-201ENST00000263735 LMTK3Q96Q04 1460 aa32.5■■■□□ 2.79
EPCAM-201ENST00000263735 ITSN1Q15811 1721 aa32.5■■■□□ 2.79
EPCAM-201ENST00000263735 AMER1Q5JTC6 1135 aaPredicted RBP32.5■■■□□ 2.79
EPCAM-201ENST00000263735 YTHDC1Q96MU7 727 aaKnown RBP32.5■■■□□ 2.79
EPCAM-201ENST00000263735 MYBBP1AQ9BQG0 1328 aaKnown RBP32.5■■■□□ 2.79
EPCAM-201ENST00000263735 NCKAP5LQ9HCH0 1330 aa32.49■■■□□ 2.79
EPCAM-201ENST00000263735 NSD3Q9BZ95 1437 aa32.48■■■□□ 2.79
EPCAM-201ENST00000263735 CARD14Q9BXL6 1004 aa32.48■■■□□ 2.79
EPCAM-201ENST00000263735 AKAP12Q02952 1782 aa32.47■■■□□ 2.79
EPCAM-201ENST00000263735 CC2D1BQ5T0F9 858 aaKnown RBP32.47■■■□□ 2.79
EPCAM-201ENST00000263735 ATP7BP35670 1465 aa32.47■■■□□ 2.79
EPCAM-201ENST00000263735 NALCNQ8IZF0 1738 aa32.47■■■□□ 2.79
EPCAM-201ENST00000263735 ANKRD26Q9UPS8 1709 aa32.46■■■□□ 2.79
EPCAM-201ENST00000263735 CD163L1Q9NR16 1453 aa32.45■■■□□ 2.79
EPCAM-201ENST00000263735 KCNA6P17658 529 aa32.45■■■□□ 2.78
EPCAM-201ENST00000263735 KIF20BQ96Q89 1820 aa32.44■■■□□ 2.78
EPCAM-201ENST00000263735 STRCQ7RTU9 1775 aa32.44■■■□□ 2.78
EPCAM-201ENST00000263735 MRS2Q9HD23 443 aa32.43■■■□□ 2.78
EPCAM-201ENST00000263735 A0A1W2PP64 1363 aa32.43■■■□□ 2.78
EPCAM-201ENST00000263735 MON2Q7Z3U7 1717 aa32.43■■■□□ 2.78
EPCAM-201ENST00000263735 FMN2Q9NZ56 1722 aa32.42■■■□□ 2.78
EPCAM-201ENST00000263735 RGPD8O14715 1765 aaPredicted RBP32.42■■■□□ 2.78
EPCAM-201ENST00000263735 BRD4O60885 1362 aaPredicted RBP32.42■■■□□ 2.78
EPCAM-201ENST00000263735 CCDC184Q52MB2 194 aa32.42■■■□□ 2.78
EPCAM-201ENST00000263735 TERF2IPQ9NYB0 399 aa32.41■■■□□ 2.78
EPCAM-201ENST00000263735 CDC42BPGQ6DT37 1551 aa32.41■■■□□ 2.78
EPCAM-201ENST00000263735 PPIP5K1Q6PFW1 1433 aa32.39■■■□□ 2.78
EPCAM-201ENST00000263735 NLRP13Q86W25 1043 aa32.37■■■□□ 2.77
EPCAM-201ENST00000263735 NUDT16Q96DE0 195 aaKnown RBP32.36■■■□□ 2.77
EPCAM-201ENST00000263735 NSD2O96028 1365 aa32.36■■■□□ 2.77
EPCAM-201ENST00000263735 CGNL1Q0VF96 1302 aa32.35■■■□□ 2.77
EPCAM-201ENST00000263735 HDGFL2Q7Z4V5 671 aaPredicted RBP32.35■■■□□ 2.77
EPCAM-201ENST00000263735 CABP1Q9NZU7 370 aa32.35■■■□□ 2.77
EPCAM-201ENST00000263735 NKTRP30414 1462 aaKnown RBP32.35■■■□□ 2.77
EPCAM-201ENST00000263735 CENPBP07199 599 aaPredicted RBP32.34■■■□□ 2.77
EPCAM-201ENST00000263735 CCDC61Q9Y6R9 512 aa32.34■■■□□ 2.77
EPCAM-201ENST00000263735 STRCP1A6NGW2 1772 aa32.33■■■□□ 2.77
EPCAM-201ENST00000263735 HSPA2P54652 639 aa32.33■■■□□ 2.77
EPCAM-201ENST00000263735 CPSF1Q10570 1443 aaKnown RBP32.31■■■□□ 2.76
EPCAM-201ENST00000263735 PRR36Q9H6K5 1346 aa32.31■■■□□ 2.76
EPCAM-201ENST00000263735 ADGRL3Q9HAR2 1447 aa32.29■■■□□ 2.76
EPCAM-201ENST00000263735 ANKARQ7Z5J8 1434 aa32.28■■■□□ 2.76
EPCAM-201ENST00000263735 NRKQ7Z2Y5 1582 aa32.27■■■□□ 2.76
EPCAM-201ENST00000263735 PPP2R1AP30153 589 aa32.25■■■□□ 2.75
EPCAM-201ENST00000263735 EDC4Q6P2E9 1401 aaKnown RBP32.25■■■□□ 2.75
EPCAM-201ENST00000263735 FAM9BQ8IZU0 186 aa32.21■■■□□ 2.75
EPCAM-201ENST00000263735 PLEKHG3A1L390 1219 aa32.2■■■□□ 2.74
EPCAM-201ENST00000263735 PNISRQ8TF01 805 aaKnown RBP32.2■■■□□ 2.74
EPCAM-201ENST00000263735 MORC1Q86VD1 984 aa32.19■■■□□ 2.74
EPCAM-201ENST00000263735 ZNF692Q9BU19 519 aaPredicted RBP32.19■■■□□ 2.74
EPCAM-201ENST00000263735 NUTM2FA1L443 756 aa32.15■■■□□ 2.74
EPCAM-201ENST00000263735 XIRP1Q702N8 1843 aaKnown RBP32.14■■■□□ 2.74
EPCAM-201ENST00000263735 FYB1O15117 783 aa32.14■■■□□ 2.74
EPCAM-201ENST00000263735 NCOA3Q9Y6Q9 1424 aa32.13■■■□□ 2.73
EPCAM-201ENST00000263735 ACEP12821 1306 aa32.13■■■□□ 2.73
EPCAM-201ENST00000263735 POLR3AO14802 1390 aaPredicted RBP32.12■■■□□ 2.73
EPCAM-201ENST00000263735 PROSER2Q86WR7 435 aaPredicted RBP32.12■■■□□ 2.73
EPCAM-201ENST00000263735 USP6P35125 1406 aa32.11■■■□□ 2.73
EPCAM-201ENST00000263735 MAP2P11137 1827 aaKnown RBP32.1■■■□□ 2.73
EPCAM-201ENST00000263735 RBM33Q96EV2 1170 aaKnown RBP32.09■■■□□ 2.73
EPCAM-201ENST00000263735 GGNBP2Q9H3C7 697 aa32.09■■■□□ 2.73
EPCAM-201ENST00000263735 C14orf37Q86TY3 774 aa32.08■■■□□ 2.73
EPCAM-201ENST00000263735 HNRNPUQ00839 825 aaKnown RBP eCLIP32.07■■■□□ 2.72
EPCAM-201ENST00000263735 SHPRHQ149N8 1683 aa32.06■■■□□ 2.72
EPCAM-201ENST00000263735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.06■■■□□ 2.72
EPCAM-201ENST00000263735 INSRP06213 1382 aa32.06■■■□□ 2.72
EPCAM-201ENST00000263735 DCCP43146 1447 aa32.05■■■□□ 2.72
EPCAM-201ENST00000263735 SSH2Q76I76 1423 aa32.04■■■□□ 2.72
EPCAM-201ENST00000263735 KIF1AQ12756 1690 aa32.04■■■□□ 2.72
EPCAM-201ENST00000263735 TMEM94Q12767 1356 aa32.02■■■□□ 2.72
EPCAM-201ENST00000263735 USP54Q70EL1 1684 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms