RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
FAM20B-201ENST00000263733 CPLX1O14810 134 aa23.59■■□□□ 1.37
FAM20B-201ENST00000263733 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.37
FAM20B-201ENST00000263733 TPM1P09493 284 aa23.58■■□□□ 1.37
FAM20B-201ENST00000263733 RNF20Q5VTR2 975 aa23.58■■□□□ 1.37
FAM20B-201ENST00000263733 TEX35Q5T0J7 233 aa23.58■■□□□ 1.37
FAM20B-201ENST00000263733 NOB1Q9ULX3 412 aaKnown RBP23.58■■□□□ 1.36
FAM20B-201ENST00000263733 MAP7D2Q96T17 732 aa23.57■■□□□ 1.36
FAM20B-201ENST00000263733 C1orf141Q5JVX7 400 aa23.57■■□□□ 1.36
FAM20B-201ENST00000263733 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
FAM20B-201ENST00000263733 TSPY26PQ9H489 355 aa23.56■■□□□ 1.36
FAM20B-201ENST00000263733 MCM4P33991 863 aa23.56■■□□□ 1.36
FAM20B-201ENST00000263733 NEXNQ0ZGT2 675 aa23.55■■□□□ 1.36
FAM20B-201ENST00000263733 AKAP17AQ02040 695 aaKnown RBP23.55■■□□□ 1.36
FAM20B-201ENST00000263733 CCDC73Q6ZRK6 1079 aa23.55■■□□□ 1.36
FAM20B-201ENST00000263733 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
FAM20B-201ENST00000263733 CFAP70Q5T0N1 1121 aa23.55■■□□□ 1.36
FAM20B-201ENST00000263733 CFTRP13569 1480 aa23.55■■□□□ 1.36
FAM20B-201ENST00000263733 MNS1Q8NEH6 495 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 CASKIN1Q8WXD9 1431 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 MBD3O95983 291 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 CPLX2Q6PUV4 134 aaKnown RBP23.54■■□□□ 1.36
FAM20B-201ENST00000263733 PTPRGP23470 1445 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 CHMP4CQ96CF2 233 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 TRIM5Q9C035 493 aa23.54■■□□□ 1.36
FAM20B-201ENST00000263733 SPC24Q8NBT2 197 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 FIBPO43427 364 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 MARCH6O60337 910 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 APPP05067 770 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 TRIM29Q14134 588 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 RABEP1Q15276 862 aa23.53■■□□□ 1.36
FAM20B-201ENST00000263733 MTERF4Q7Z6M4 381 aaKnown RBP23.53■■□□□ 1.36
FAM20B-201ENST00000263733 SETQ01105 290 aaPredicted RBP23.52■■□□□ 1.36
FAM20B-201ENST00000263733 SYNE3Q6ZMZ3 975 aa23.52■■□□□ 1.36
FAM20B-201ENST00000263733 ESPNB1AK53 854 aa23.52■■□□□ 1.36
FAM20B-201ENST00000263733 PRKCSHP14314 528 aaPredicted RBP23.52■■□□□ 1.36
FAM20B-201ENST00000263733 TRHP20396 242 aaPredicted RBP23.52■■□□□ 1.35
FAM20B-201ENST00000263733 FYCO1Q9BQS8 1478 aa23.51■■□□□ 1.35
FAM20B-201ENST00000263733 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
FAM20B-201ENST00000263733 PCMTD1Q96MG8 357 aaPredicted RBP23.5■■□□□ 1.35
FAM20B-201ENST00000263733 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.5■■□□□ 1.35
FAM20B-201ENST00000263733 K7ELQ4 463 aaPredicted RBP23.49■■□□□ 1.35
FAM20B-201ENST00000263733 C11orf95C9JLR9 678 aaPredicted RBP23.49■■□□□ 1.35
FAM20B-201ENST00000263733 ERC2O15083 957 aa23.49■■□□□ 1.35
FAM20B-201ENST00000263733 PRKAR2BP31323 418 aa23.48■■□□□ 1.35
FAM20B-201ENST00000263733 UBTFL1P0CB47 393 aaPredicted RBP23.48■■□□□ 1.35
FAM20B-201ENST00000263733 SDF4Q9BRK5 362 aa23.48■■□□□ 1.35
FAM20B-201ENST00000263733 ARGLU1Q9NWB6 273 aaPredicted RBP23.48■■□□□ 1.35
FAM20B-201ENST00000263733 CCDC70Q6NSX1 233 aa23.47■■□□□ 1.35
FAM20B-201ENST00000263733 VPS53Q5VIR6 699 aa23.47■■□□□ 1.35
FAM20B-201ENST00000263733 PATL2C9JE40 543 aaKnown RBP23.46■■□□□ 1.35
FAM20B-201ENST00000263733 GCC1Q96CN9 775 aa23.46■■□□□ 1.35
FAM20B-201ENST00000263733 GAPVD1Q14C86 1478 aa23.46■■□□□ 1.35
FAM20B-201ENST00000263733 SLC12A5Q9H2X9 1139 aa23.46■■□□□ 1.35
FAM20B-201ENST00000263733 IPO7O95373 1038 aaKnown RBP23.46■■□□□ 1.35
FAM20B-201ENST00000263733 SURF6O75683 361 aaKnown RBP23.45■■□□□ 1.35
FAM20B-201ENST00000263733 MVPQ14764 893 aaKnown RBP23.45■■□□□ 1.34
FAM20B-201ENST00000263733 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.34
FAM20B-201ENST00000263733 UQCRHLA0A096LP55 91 aa23.45■■□□□ 1.34
FAM20B-201ENST00000263733 KDM4AO75164 1064 aa23.45■■□□□ 1.34
FAM20B-201ENST00000263733 UQCRHP07919 91 aa23.45■■□□□ 1.34
FAM20B-201ENST00000263733 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
FAM20B-201ENST00000263733 AIMP1Q12904 312 aaKnown RBP23.44■■□□□ 1.34
FAM20B-201ENST00000263733 HSP90AB4PQ58FF6 505 aa23.44■■□□□ 1.34
FAM20B-201ENST00000263733 PDILTQ8N807 584 aa23.44■■□□□ 1.34
FAM20B-201ENST00000263733 GTF2E1P29083 439 aaPredicted RBP23.44■■□□□ 1.34
FAM20B-201ENST00000263733 TRDNQ13061 729 aa23.43■■□□□ 1.34
FAM20B-201ENST00000263733 NFXL1Q6ZNB6 911 aa23.43■■□□□ 1.34
FAM20B-201ENST00000263733 CEP89Q96ST8 783 aa23.43■■□□□ 1.34
FAM20B-201ENST00000263733 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
FAM20B-201ENST00000263733 CNTROBQ8N137 903 aa23.42■■□□□ 1.34
FAM20B-201ENST00000263733 CEBPZQ03701 1054 aaKnown RBP23.42■■□□□ 1.34
FAM20B-201ENST00000263733 HMGN5P82970 282 aaKnown RBP23.42■■□□□ 1.34
FAM20B-201ENST00000263733 LRRFIP1Q32MZ4 808 aaKnown RBP23.42■■□□□ 1.34
FAM20B-201ENST00000263733 ATF7IPQ6VMQ6 1270 aa23.42■■□□□ 1.34
FAM20B-201ENST00000263733 NEUROD6Q96NK8 337 aa23.42■■□□□ 1.34
FAM20B-201ENST00000263733 LETM1O95202 739 aaPredicted RBP23.42■■□□□ 1.34
FAM20B-201ENST00000263733 CHD1LQ86WJ1 897 aa23.41■■□□□ 1.34
FAM20B-201ENST00000263733 DDX58O95786 925 aaKnown RBP23.41■■□□□ 1.34
FAM20B-201ENST00000263733 HFM1A2PYH4 1435 aa23.41■■□□□ 1.34
FAM20B-201ENST00000263733 ANKRD20A12PQ8NF67 263 aa23.41■■□□□ 1.34
FAM20B-201ENST00000263733 HOOK1Q9UJC3 728 aaKnown RBP23.4■■□□□ 1.34
FAM20B-201ENST00000263733 SYNJ1O43426 1573 aa23.4■■□□□ 1.34
FAM20B-201ENST00000263733 FSD1Q9BTV5 496 aa23.4■■□□□ 1.34
FAM20B-201ENST00000263733 MCM2P49736 904 aa23.39■■□□□ 1.34
FAM20B-201ENST00000263733 SMC2O95347 1197 aa23.39■■□□□ 1.33
FAM20B-201ENST00000263733 NAT10Q9H0A0 1025 aaKnown RBP23.39■■□□□ 1.33
FAM20B-201ENST00000263733 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
FAM20B-201ENST00000263733 TTLL5Q6EMB2 1281 aa23.39■■□□□ 1.33
FAM20B-201ENST00000263733 SLFN5Q08AF3 891 aa23.38■■□□□ 1.33
FAM20B-201ENST00000263733 STAC3Q96MF2 364 aa23.38■■□□□ 1.33
FAM20B-201ENST00000263733 CWC22Q9HCG8 908 aaKnown RBP23.38■■□□□ 1.33
FAM20B-201ENST00000263733 KIAA1107Q9UPP5 1409 aa23.38■■□□□ 1.33
FAM20B-201ENST00000263733 NUTM2GQ5VZR2 741 aa23.37■■□□□ 1.33
FAM20B-201ENST00000263733 NINLQ9Y2I6 1382 aa23.37■■□□□ 1.33
FAM20B-201ENST00000263733 RRP9O43818 475 aaKnown RBP23.37■■□□□ 1.33
FAM20B-201ENST00000263733 PSMA5P28066 241 aa23.37■■□□□ 1.33
FAM20B-201ENST00000263733 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
FAM20B-201ENST00000263733 MAP4K4O95819 1239 aaPredicted RBP23.36■■□□□ 1.33
FAM20B-201ENST00000263733 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms