RNA–Protein interactions for RNA: ENST00000263401.9

COMMD9-201, Transcript of COMM domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD9, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-201ENST00000263401 CLTCQ00610 1675 aaKnown RBP13.84□□□□□ -0.19
COMMD9-201ENST00000263401 PRAM1Q96QH2 718 aa13.83□□□□□ -0.19
COMMD9-201ENST00000263401 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
COMMD9-201ENST00000263401 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
COMMD9-201ENST00000263401 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
COMMD9-201ENST00000263401 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
COMMD9-201ENST00000263401 RRP7AQ9Y3A4 280 aaKnown RBP13.82□□□□□ -0.2
COMMD9-201ENST00000263401 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
COMMD9-201ENST00000263401 DUSP27Q5VZP5 1158 aa13.81□□□□□ -0.2
COMMD9-201ENST00000263401 CRBNQ96SW2 442 aa13.8□□□□□ -0.2
COMMD9-201ENST00000263401 POGKQ9P215 609 aa13.8□□□□□ -0.2
COMMD9-201ENST00000263401 MSH5O43196 834 aa13.8□□□□□ -0.2
COMMD9-201ENST00000263401 PLPPR3Q6T4P5 718 aa13.8□□□□□ -0.2
COMMD9-201ENST00000263401 MTHFSP49914 203 aa13.79□□□□□ -0.2
COMMD9-201ENST00000263401 WAPLQ7Z5K2 1190 aa13.79□□□□□ -0.2
COMMD9-201ENST00000263401 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
COMMD9-201ENST00000263401 KIF13AQ9H1H9 1805 aa13.79□□□□□ -0.2
COMMD9-201ENST00000263401 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
COMMD9-201ENST00000263401 GOLGA2Q08379 1002 aa13.78□□□□□ -0.2
COMMD9-201ENST00000263401 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
COMMD9-201ENST00000263401 PTPRMP28827 1452 aa13.77□□□□□ -0.21
COMMD9-201ENST00000263401 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
COMMD9-201ENST00000263401 A0A1W2PP64 1363 aa13.77□□□□□ -0.21
COMMD9-201ENST00000263401 INSRP06213 1382 aa13.77□□□□□ -0.21
COMMD9-201ENST00000263401 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
COMMD9-201ENST00000263401 FBLN1P23142 703 aa13.76□□□□□ -0.21
COMMD9-201ENST00000263401 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
COMMD9-201ENST00000263401 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
COMMD9-201ENST00000263401 SLFN5Q08AF3 891 aa13.75□□□□□ -0.21
COMMD9-201ENST00000263401 ANKRD36BQ8N2N9 1353 aa13.74□□□□□ -0.21
COMMD9-201ENST00000263401 ZFYVE9O95405 1425 aa13.74□□□□□ -0.21
COMMD9-201ENST00000263401 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
COMMD9-201ENST00000263401 BCAR3O75815 825 aa13.74□□□□□ -0.21
COMMD9-201ENST00000263401 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
COMMD9-201ENST00000263401 POLR3AO14802 1390 aaPredicted RBP13.73□□□□□ -0.21
COMMD9-201ENST00000263401 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
COMMD9-201ENST00000263401 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
COMMD9-201ENST00000263401 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
COMMD9-201ENST00000263401 NCKAP5LQ9HCH0 1330 aa13.72□□□□□ -0.21
COMMD9-201ENST00000263401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
COMMD9-201ENST00000263401 WWC1Q8IX03 1113 aa13.71□□□□□ -0.22
COMMD9-201ENST00000263401 TCP11L2Q8N4U5 519 aa13.71□□□□□ -0.22
COMMD9-201ENST00000263401 AGLP35573 1532 aa13.71□□□□□ -0.22
COMMD9-201ENST00000263401 ZMYM3Q14202 1370 aa13.7□□□□□ -0.22
COMMD9-201ENST00000263401 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
COMMD9-201ENST00000263401 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
COMMD9-201ENST00000263401 CEBPAP49715 358 aaPredicted RBP13.7□□□□□ -0.22
COMMD9-201ENST00000263401 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
COMMD9-201ENST00000263401 TXNDC2Q86VQ3 553 aa13.7□□□□□ -0.22
COMMD9-201ENST00000263401 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
COMMD9-201ENST00000263401 FYB1O15117 783 aa13.69□□□□□ -0.22
COMMD9-201ENST00000263401 METP08581 1390 aa13.69□□□□□ -0.22
COMMD9-201ENST00000263401 SPATA31D1Q6ZQQ2 1576 aa13.69□□□□□ -0.22
COMMD9-201ENST00000263401 U2SURPO15042 1029 aaKnown RBP13.69□□□□□ -0.22
COMMD9-201ENST00000263401 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
COMMD9-201ENST00000263401 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
COMMD9-201ENST00000263401 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
COMMD9-201ENST00000263401 PPM1GO15355 546 aaPredicted RBP13.67□□□□□ -0.22
COMMD9-201ENST00000263401 RUNDC1Q96C34 613 aa13.67□□□□□ -0.22
COMMD9-201ENST00000263401 ABCC11Q96J66 1382 aa13.67□□□□□ -0.22
COMMD9-201ENST00000263401 BCL2L13Q9BXK5 485 aa13.67□□□□□ -0.22
COMMD9-201ENST00000263401 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
COMMD9-201ENST00000263401 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
COMMD9-201ENST00000263401 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
COMMD9-201ENST00000263401 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
COMMD9-201ENST00000263401 E9PSI1 815 aa13.66□□□□□ -0.22
COMMD9-201ENST00000263401 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
COMMD9-201ENST00000263401 TERF2IPQ9NYB0 399 aa13.65□□□□□ -0.22
COMMD9-201ENST00000263401 SETD1AO15047 1707 aaKnown RBP13.65□□□□□ -0.22
COMMD9-201ENST00000263401 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
COMMD9-201ENST00000263401 ATAD2Q6PL18 1390 aa13.65□□□□□ -0.22
COMMD9-201ENST00000263401 NRXN3Q9Y4C0 1643 aa13.65□□□□□ -0.23
COMMD9-201ENST00000263401 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
COMMD9-201ENST00000263401 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
COMMD9-201ENST00000263401 IQSEC2Q5JU85 1478 aa13.63□□□□□ -0.23
COMMD9-201ENST00000263401 HDGFL2Q7Z4V5 671 aaPredicted RBP13.63□□□□□ -0.23
COMMD9-201ENST00000263401 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
COMMD9-201ENST00000263401 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
COMMD9-201ENST00000263401 NPM2Q86SE8 214 aaKnown RBP13.62□□□□□ -0.23
COMMD9-201ENST00000263401 PANK1Q8TE04 598 aa13.62□□□□□ -0.23
COMMD9-201ENST00000263401 TNRQ92752 1358 aa13.62□□□□□ -0.23
COMMD9-201ENST00000263401 TSR2Q969E8 191 aaKnown RBP13.62□□□□□ -0.23
COMMD9-201ENST00000263401 NSD2O96028 1365 aa13.61□□□□□ -0.23
COMMD9-201ENST00000263401 NME9Q86XW9 330 aa13.61□□□□□ -0.23
COMMD9-201ENST00000263401 LTKP29376 864 aa13.6□□□□□ -0.23
COMMD9-201ENST00000263401 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
COMMD9-201ENST00000263401 CANXP27824 592 aaKnown RBP13.59□□□□□ -0.23
COMMD9-201ENST00000263401 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
COMMD9-201ENST00000263401 WASLO00401 505 aaPredicted RBP13.59□□□□□ -0.23
COMMD9-201ENST00000263401 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
COMMD9-201ENST00000263401 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
COMMD9-201ENST00000263401 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.23
COMMD9-201ENST00000263401 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.23
COMMD9-201ENST00000263401 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
COMMD9-201ENST00000263401 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
COMMD9-201ENST00000263401 PPIP5K1Q6PFW1 1433 aa13.58□□□□□ -0.24
COMMD9-201ENST00000263401 CLUAP1Q96AJ1 413 aa13.58□□□□□ -0.24
COMMD9-201ENST00000263401 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
COMMD9-201ENST00000263401 PHF23Q9BUL5 403 aaPredicted RBP13.58□□□□□ -0.24
COMMD9-201ENST00000263401 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms