RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
PKD1-201ENST00000262304 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
PKD1-201ENST00000262304 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
PKD1-201ENST00000262304 KIAA0754O94854 1291 aa12.32□□□□□ -0.44
PKD1-201ENST00000262304 DYDC1Q8WWB3 177 aa12.32□□□□□ -0.44
PKD1-201ENST00000262304 CPLX1O14810 134 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
PKD1-201ENST00000262304 TAF3Q5VWG9 929 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 CDR1P51861 262 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 RALBP1Q15311 655 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 ATP6V1DQ9Y5K8 247 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 CCDC66A2RUB6 948 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 SYNE3Q6ZMZ3 975 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 CYB5RLQ6IPT4 315 aa12.31□□□□□ -0.44
PKD1-201ENST00000262304 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
PKD1-201ENST00000262304 UQCRHLA0A096LP55 91 aa12.3□□□□□ -0.44
PKD1-201ENST00000262304 UQCRHP07919 91 aa12.3□□□□□ -0.44
PKD1-201ENST00000262304 GIMAP7Q8NHV1 300 aa12.3□□□□□ -0.44
PKD1-201ENST00000262304 NOL10Q9BSC4 688 aaKnown RBP12.3□□□□□ -0.44
PKD1-201ENST00000262304 NGDNQ8NEJ9 315 aaKnown RBP12.29□□□□□ -0.44
PKD1-201ENST00000262304 OFD1O75665 1012 aa12.29□□□□□ -0.44
PKD1-201ENST00000262304 NFKBIBQ15653 356 aa12.29□□□□□ -0.44
PKD1-201ENST00000262304 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
PKD1-201ENST00000262304 SMC3Q9UQE7 1217 aa12.29□□□□□ -0.44
PKD1-201ENST00000262304 EIF2S2P20042 333 aaKnown RBP12.28□□□□□ -0.44
PKD1-201ENST00000262304 MSH5O43196 834 aa12.28□□□□□ -0.44
PKD1-201ENST00000262304 CLASRPQ8N2M8 674 aaKnown RBP12.28□□□□□ -0.44
PKD1-201ENST00000262304 HOOK1Q9UJC3 728 aaKnown RBP12.27□□□□□ -0.44
PKD1-201ENST00000262304 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.45
PKD1-201ENST00000262304 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
PKD1-201ENST00000262304 C11orf95C9JLR9 678 aaPredicted RBP12.26□□□□□ -0.45
PKD1-201ENST00000262304 GAPVD1Q14C86 1478 aa12.26□□□□□ -0.45
PKD1-201ENST00000262304 SEPT7Q16181 437 aaKnown RBP12.26□□□□□ -0.45
PKD1-201ENST00000262304 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
PKD1-201ENST00000262304 CHMP4CQ96CF2 233 aa12.26□□□□□ -0.45
PKD1-201ENST00000262304 ZBTB9Q96C00 473 aa12.26□□□□□ -0.45
PKD1-201ENST00000262304 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
PKD1-201ENST00000262304 CCDC47Q96A33 483 aaKnown RBP12.25□□□□□ -0.45
PKD1-201ENST00000262304 TSPY26PQ9H489 355 aa12.25□□□□□ -0.45
PKD1-201ENST00000262304 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
PKD1-201ENST00000262304 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
PKD1-201ENST00000262304 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 AMOTL1Q8IY63 956 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 LNPKQ9C0E8 428 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 TMX1Q9H3N1 280 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 AMPHP49418 695 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 UACAQ9BZF9 1416 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 CBX1P83916 185 aa12.24□□□□□ -0.45
PKD1-201ENST00000262304 L3MBTL2Q969R5 705 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 GOLGA6L10A0A0M3HER8 536 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 GOLGA6L10A6NI86 522 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 PUS7Q96PZ0 661 aaKnown RBP12.23□□□□□ -0.45
PKD1-201ENST00000262304 RRP1P56182 461 aaKnown RBP12.23□□□□□ -0.45
PKD1-201ENST00000262304 CCDC173Q0VFZ6 552 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 ZRSR2Q15696 482 aaKnown RBP12.23□□□□□ -0.45
PKD1-201ENST00000262304 DEF6Q9H4E7 631 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 TRAK1Q9UPV9 953 aa12.23□□□□□ -0.45
PKD1-201ENST00000262304 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.22□□□□□ -0.45
PKD1-201ENST00000262304 TRAK2O60296 914 aa12.22□□□□□ -0.45
PKD1-201ENST00000262304 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
PKD1-201ENST00000262304 SERPINA10Q9UK55 444 aa12.22□□□□□ -0.45
PKD1-201ENST00000262304 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
PKD1-201ENST00000262304 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
PKD1-201ENST00000262304 IFIT2P09913 472 aaKnown RBP12.22□□□□□ -0.45
PKD1-201ENST00000262304 POLR3GO15318 223 aaPredicted RBP12.21□□□□□ -0.45
PKD1-201ENST00000262304 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.45
PKD1-201ENST00000262304 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
PKD1-201ENST00000262304 C22orf23Q9BZE7 217 aa12.21□□□□□ -0.45
PKD1-201ENST00000262304 FIBPO43427 364 aa12.21□□□□□ -0.45
PKD1-201ENST00000262304 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
PKD1-201ENST00000262304 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
PKD1-201ENST00000262304 NF2P35240 595 aa12.2□□□□□ -0.46
PKD1-201ENST00000262304 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
PKD1-201ENST00000262304 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
PKD1-201ENST00000262304 REC8O95072 547 aa12.2□□□□□ -0.46
PKD1-201ENST00000262304 MYO6Q9UM54 1294 aa12.2□□□□□ -0.46
PKD1-201ENST00000262304 SETD1BQ9UPS6 1966 aaKnown RBP12.2□□□□□ -0.46
PKD1-201ENST00000262304 RNF187Q5TA31 235 aaPredicted RBP12.2□□□□□ -0.46
PKD1-201ENST00000262304 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
PKD1-201ENST00000262304 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
PKD1-201ENST00000262304 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
PKD1-201ENST00000262304 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
PKD1-201ENST00000262304 TTC16Q8NEE8 873 aa12.19□□□□□ -0.46
PKD1-201ENST00000262304 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
PKD1-201ENST00000262304 HDAC5Q9UQL6 1122 aa12.19□□□□□ -0.46
PKD1-201ENST00000262304 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
PKD1-201ENST00000262304 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
PKD1-201ENST00000262304 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
PKD1-201ENST00000262304 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
PKD1-201ENST00000262304 SAFBQ15424 915 aaKnown RBP eCLIP12.18□□□□□ -0.46
PKD1-201ENST00000262304 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
PKD1-201ENST00000262304 CPLX2Q6PUV4 134 aaKnown RBP12.18□□□□□ -0.46
PKD1-201ENST00000262304 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
PKD1-201ENST00000262304 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
PKD1-201ENST00000262304 NLRP13Q86W25 1043 aa12.17□□□□□ -0.46
PKD1-201ENST00000262304 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
PKD1-201ENST00000262304 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms