RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 SMC2O95347 1197 aa12.97□□□□□ -0.33
CALCOCO1-201ENST00000262059 NGDNQ8NEJ9 315 aaKnown RBP12.97□□□□□ -0.33
CALCOCO1-201ENST00000262059 MBD3O95983 291 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 WWC1Q8IX03 1113 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 CCDC73Q6ZRK6 1079 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 ANKRD20A12PQ8NF67 263 aa12.96□□□□□ -0.33
CALCOCO1-201ENST00000262059 KIF3BO15066 747 aa12.96□□□□□ -0.34
CALCOCO1-201ENST00000262059 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.34
CALCOCO1-201ENST00000262059 LETM1O95202 739 aaPredicted RBP12.95□□□□□ -0.34
CALCOCO1-201ENST00000262059 MCM4P33991 863 aa12.95□□□□□ -0.34
CALCOCO1-201ENST00000262059 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
CALCOCO1-201ENST00000262059 DYDC1Q8WWB3 177 aa12.95□□□□□ -0.34
CALCOCO1-201ENST00000262059 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO1-201ENST00000262059 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
CALCOCO1-201ENST00000262059 FHOD3Q2V2M9 1422 aa12.94□□□□□ -0.34
CALCOCO1-201ENST00000262059 AKAP17AQ02040 695 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 VPS53Q5VIR6 699 aa12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 NAT10Q9H0A0 1025 aaKnown RBP12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 FAM193AP78312 1265 aa12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 FAM177A1Q8N128 213 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 PANK1Q8TE04 598 aa12.93□□□□□ -0.34
CALCOCO1-201ENST00000262059 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 FMNL2Q96PY5 1086 aa12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 APAF1O14727 1248 aa12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
CALCOCO1-201ENST00000262059 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 CCDC102AQ96A19 550 aa12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 EIF3JO75822 258 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 RUFY2Q8WXA3 655 aa12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 CCP110O43303 1012 aa12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
CALCOCO1-201ENST00000262059 FIBPO43427 364 aa12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 PANK3Q9H999 370 aa12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 GTF2A1P52655 376 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 WASHC2CQ9Y4E1 1318 aa12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 UACAQ9BZF9 1416 aa12.9□□□□□ -0.34
CALCOCO1-201ENST00000262059 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.35
CALCOCO1-201ENST00000262059 AKNAQ7Z591 1439 aa12.9□□□□□ -0.35
CALCOCO1-201ENST00000262059 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
CALCOCO1-201ENST00000262059 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
CALCOCO1-201ENST00000262059 CPLX2Q6PUV4 134 aaKnown RBP12.89□□□□□ -0.35
CALCOCO1-201ENST00000262059 CDC45O75419 566 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 TIGD1Q96MW7 591 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 ERLIN1O75477 346 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 TRIM29Q14134 588 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 SMARCA2P51531 1590 aa12.88□□□□□ -0.35
CALCOCO1-201ENST00000262059 COG3Q96JB2 828 aa12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 CPLX1O14810 134 aa12.87□□□□□ -0.35
CALCOCO1-201ENST00000262059 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-201ENST00000262059 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
CALCOCO1-201ENST00000262059 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
CALCOCO1-201ENST00000262059 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CALCOCO1-201ENST00000262059 EVC2Q86UK5 1308 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 USP47Q96K76 1375 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 SYCE3A1L190 88 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 PAXIP1Q6ZW49 1069 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 GOLGA6L10A6NI86 522 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 NGEFQ8N5V2 710 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 UBXN4Q92575 508 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 NEK4P51957 841 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
CALCOCO1-201ENST00000262059 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
CALCOCO1-201ENST00000262059 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
CALCOCO1-201ENST00000262059 ROCK1Q13464 1354 aa12.84□□□□□ -0.35
CALCOCO1-201ENST00000262059 NOL10Q9BSC4 688 aaKnown RBP12.84□□□□□ -0.35
CALCOCO1-201ENST00000262059 KINO60870 393 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 ZRSR2Q15696 482 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 K7ELQ4 463 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 EVA1CP58658 441 aa12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
CALCOCO1-201ENST00000262059 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms