RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
SGCA-201ENST00000262018 RALGAPBQ86X10 1494 aa19.97■□□□□ 0.79
SGCA-201ENST00000262018 UNC5CLQ8IV45 518 aa19.96■□□□□ 0.79
SGCA-201ENST00000262018 IQGAP3Q86VI3 1631 aa19.96■□□□□ 0.79
SGCA-201ENST00000262018 HRCP23327 699 aa19.95■□□□□ 0.78
SGCA-201ENST00000262018 NPHP3Q7Z494 1330 aa19.95■□□□□ 0.78
SGCA-201ENST00000262018 GLI3P10071 1580 aa19.95■□□□□ 0.78
SGCA-201ENST00000262018 MARF1Q9Y4F3 1742 aaKnown RBP19.95■□□□□ 0.78
SGCA-201ENST00000262018 XPCQ01831 940 aaPredicted RBP19.94■□□□□ 0.78
SGCA-201ENST00000262018 NUP155O75694 1391 aa19.94■□□□□ 0.78
SGCA-201ENST00000262018 ESCO1Q5FWF5 840 aa19.93■□□□□ 0.78
SGCA-201ENST00000262018 SEPT12Q8IYM1 358 aa19.93■□□□□ 0.78
SGCA-201ENST00000262018 ROBO2Q9HCK4 1378 aa19.93■□□□□ 0.78
SGCA-201ENST00000262018 BRWD3Q6RI45 1802 aa19.92■□□□□ 0.78
SGCA-201ENST00000262018 FOXO3O43524 673 aa19.91■□□□□ 0.78
SGCA-201ENST00000262018 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.91■□□□□ 0.78
SGCA-201ENST00000262018 PXDNQ92626 1479 aa19.9■□□□□ 0.78
SGCA-201ENST00000262018 SLIT2O94813 1529 aa19.89■□□□□ 0.77
SGCA-201ENST00000262018 BAG6P46379 1132 aa19.89■□□□□ 0.77
SGCA-201ENST00000262018 SPHKAPQ2M3C7 1700 aa19.88■□□□□ 0.77
SGCA-201ENST00000262018 NEXMIFQ5QGS0 1516 aa19.88■□□□□ 0.77
SGCA-201ENST00000262018 KRT27Q7Z3Y8 459 aa19.87■□□□□ 0.77
SGCA-201ENST00000262018 CCDC9Q9Y3X0 531 aaKnown RBP19.86■□□□□ 0.77
SGCA-201ENST00000262018 HFM1A2PYH4 1435 aa19.84■□□□□ 0.77
SGCA-201ENST00000262018 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
SGCA-201ENST00000262018 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
SGCA-201ENST00000262018 VPS72Q15906 364 aa19.84■□□□□ 0.77
SGCA-201ENST00000262018 NUTM2FA1L443 756 aa19.83■□□□□ 0.76
SGCA-201ENST00000262018 YY1P25490 414 aa19.83■□□□□ 0.76
SGCA-201ENST00000262018 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.76
SGCA-201ENST00000262018 A0A0G2JS52 829 aa19.82■□□□□ 0.76
SGCA-201ENST00000262018 MYT1Q01538 1121 aa19.82■□□□□ 0.76
SGCA-201ENST00000262018 ONECUT3O60422 494 aaPredicted RBP19.81■□□□□ 0.76
SGCA-201ENST00000262018 HAP1P54257 671 aaPredicted RBP19.81■□□□□ 0.76
SGCA-201ENST00000262018 EN1Q05925 392 aaPredicted RBP19.81■□□□□ 0.76
SGCA-201ENST00000262018 ROCK1Q13464 1354 aa19.8■□□□□ 0.76
SGCA-201ENST00000262018 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
SGCA-201ENST00000262018 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
SGCA-201ENST00000262018 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
SGCA-201ENST00000262018 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
SGCA-201ENST00000262018 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
SGCA-201ENST00000262018 USP32Q8NFA0 1604 aa19.78■□□□□ 0.76
SGCA-201ENST00000262018 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
SGCA-201ENST00000262018 CABLES1Q8TDN4 633 aa19.76■□□□□ 0.75
SGCA-201ENST00000262018 NAIPQ13075 1403 aa19.75■□□□□ 0.75
SGCA-201ENST00000262018 KRT28Q7Z3Y7 464 aa19.74■□□□□ 0.75
SGCA-201ENST00000262018 ITGAEP38570 1179 aa19.73■□□□□ 0.75
SGCA-201ENST00000262018 FAM98CQ17RN3 349 aaKnown RBP19.73■□□□□ 0.75
SGCA-201ENST00000262018 CCDC144AA2RUR9 1427 aa19.72■□□□□ 0.75
SGCA-201ENST00000262018 KIF1BO60333 1816 aa19.72■□□□□ 0.75
SGCA-201ENST00000262018 FAM182BQ5T319 152 aa19.71■□□□□ 0.75
SGCA-201ENST00000262018 PLCH1Q4KWH8 1693 aa19.71■□□□□ 0.75
SGCA-201ENST00000262018 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
SGCA-201ENST00000262018 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
SGCA-201ENST00000262018 EZH2Q15910 746 aaKnown RBP19.69■□□□□ 0.74
SGCA-201ENST00000262018 STK26Q9P289 416 aa19.69■□□□□ 0.74
SGCA-201ENST00000262018 LMOD2Q6P5Q4 547 aa19.68■□□□□ 0.74
SGCA-201ENST00000262018 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
SGCA-201ENST00000262018 TNS3Q68CZ2 1445 aa19.68■□□□□ 0.74
SGCA-201ENST00000262018 FAM83GA6ND36 823 aa19.68■□□□□ 0.74
SGCA-201ENST00000262018 RPGRIP1LQ68CZ1 1315 aa19.67■□□□□ 0.74
SGCA-201ENST00000262018 PSME1Q06323 249 aa19.67■□□□□ 0.74
SGCA-201ENST00000262018 KIF1AQ12756 1690 aa19.66■□□□□ 0.74
SGCA-201ENST00000262018 DISP2A7MBM2 1401 aa19.65■□□□□ 0.74
SGCA-201ENST00000262018 PHF8Q9UPP1 1060 aa19.63■□□□□ 0.73
SGCA-201ENST00000262018 PLEKHH1Q9ULM0 1364 aa19.63■□□□□ 0.73
SGCA-201ENST00000262018 DCAF8L1A6NGE4 600 aa19.62■□□□□ 0.73
SGCA-201ENST00000262018 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
SGCA-201ENST00000262018 BTG4Q9NY30 223 aa19.62■□□□□ 0.73
SGCA-201ENST00000262018 FMN2Q9NZ56 1722 aa19.62■□□□□ 0.73
SGCA-201ENST00000262018 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
SGCA-201ENST00000262018 SBNO1A3KN83 1393 aa19.6■□□□□ 0.73
SGCA-201ENST00000262018 ABCA3Q99758 1704 aa19.6■□□□□ 0.73
SGCA-201ENST00000262018 TNS1Q9HBL0 1735 aaKnown RBP19.6■□□□□ 0.73
SGCA-201ENST00000262018 TRIM37O94972 964 aa19.59■□□□□ 0.73
SGCA-201ENST00000262018 PPP1R1BQ9UD71 204 aaPredicted RBP19.59■□□□□ 0.73
SGCA-201ENST00000262018 TECPR2O15040 1411 aa19.59■□□□□ 0.73
SGCA-201ENST00000262018 PPLO60437 1756 aa19.58■□□□□ 0.73
SGCA-201ENST00000262018 NRAPQ86VF7 1730 aa19.58■□□□□ 0.73
SGCA-201ENST00000262018 ADGRF5Q8IZF2 1346 aa19.57■□□□□ 0.72
SGCA-201ENST00000262018 APBA3O96018 575 aa19.57■□□□□ 0.72
SGCA-201ENST00000262018 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
SGCA-201ENST00000262018 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
SGCA-201ENST00000262018 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
SGCA-201ENST00000262018 SPATA31A5Q5VU36 1347 aa19.56■□□□□ 0.72
SGCA-201ENST00000262018 SPATA31A7Q8IWB4 1347 aa19.56■□□□□ 0.72
SGCA-201ENST00000262018 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
SGCA-201ENST00000262018 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
SGCA-201ENST00000262018 PARD3Q8TEW0 1356 aa19.54■□□□□ 0.72
SGCA-201ENST00000262018 NBPF8Q3BBV2 869 aa19.53■□□□□ 0.72
SGCA-201ENST00000262018 NBPF14Q5TI25 921 aa19.53■□□□□ 0.72
SGCA-201ENST00000262018 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
SGCA-201ENST00000262018 RGPD8O14715 1765 aaPredicted RBP19.53■□□□□ 0.72
SGCA-201ENST00000262018 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
SGCA-201ENST00000262018 THSD7AQ9UPZ6 1657 aa19.52■□□□□ 0.72
SGCA-201ENST00000262018 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
SGCA-201ENST00000262018 COL14A1Q05707 1796 aaKnown RBP19.51■□□□□ 0.71
SGCA-201ENST00000262018 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
SGCA-201ENST00000262018 KCNQ2O43526 872 aa19.51■□□□□ 0.71
SGCA-201ENST00000262018 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms