RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 KIF3AQ9Y496 699 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 PTMSP20962 102 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 PRG4Q92954 1404 aaPredicted RBP14.85□□□□□ -0.03
SPG11-201ENST00000261866 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 ERICH2A1L162 156 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 PDE4AP27815 886 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 TPM3P06753 285 aa14.85□□□□□ -0.03
SPG11-201ENST00000261866 VPS37CA5D8V6 355 aaPredicted RBP14.84□□□□□ -0.03
SPG11-201ENST00000261866 MYL6BP14649 208 aa14.84□□□□□ -0.03
SPG11-201ENST00000261866 DDX49Q9Y6V7 483 aaKnown RBP14.84□□□□□ -0.03
SPG11-201ENST00000261866 DDX19BQ9UMR2 479 aa14.84□□□□□ -0.03
SPG11-201ENST00000261866 ZKSCAN1P17029 563 aaPredicted RBP14.84□□□□□ -0.03
SPG11-201ENST00000261866 MYOM3Q5VTT5 1437 aa14.84□□□□□ -0.03
SPG11-201ENST00000261866 BICDL1Q6ZP65 573 aa14.83□□□□□ -0.03
SPG11-201ENST00000261866 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.04
SPG11-201ENST00000261866 CCDC43Q96MW1 224 aaKnown RBP14.83□□□□□ -0.04
SPG11-201ENST00000261866 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
SPG11-201ENST00000261866 UBTFL1P0CB47 393 aaPredicted RBP14.82□□□□□ -0.04
SPG11-201ENST00000261866 SF3B2Q13435 895 aaKnown RBP14.82□□□□□ -0.04
SPG11-201ENST00000261866 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
SPG11-201ENST00000261866 KIF7Q2M1P5 1343 aa14.82□□□□□ -0.04
SPG11-201ENST00000261866 KIF6Q6ZMV9 814 aa14.82□□□□□ -0.04
SPG11-201ENST00000261866 API5Q9BZZ5 524 aaKnown RBP14.82□□□□□ -0.04
SPG11-201ENST00000261866 MAP4K4O95819 1239 aaPredicted RBP14.82□□□□□ -0.04
SPG11-201ENST00000261866 SIL1Q9H173 461 aa14.82□□□□□ -0.04
SPG11-201ENST00000261866 BECN2A8MW95 431 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 GNAI1P63096 354 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 CDK19Q9BWU1 502 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 RRP12Q5JTH9 1297 aaKnown RBP14.81□□□□□ -0.04
SPG11-201ENST00000261866 GOLGA6L19H0YKK7 550 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 ADAMTS8Q9UP79 889 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
SPG11-201ENST00000261866 ZNF592Q92610 1267 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 CABP1Q9NZU7 370 aa14.81□□□□□ -0.04
SPG11-201ENST00000261866 BICD2Q8TD16 824 aa14.8□□□□□ -0.04
SPG11-201ENST00000261866 ANKRD50Q9ULJ7 1429 aa14.8□□□□□ -0.04
SPG11-201ENST00000261866 DCAF8L1A6NGE4 600 aa14.8□□□□□ -0.04
SPG11-201ENST00000261866 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
SPG11-201ENST00000261866 TSR2Q969E8 191 aaKnown RBP14.8□□□□□ -0.04
SPG11-201ENST00000261866 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
SPG11-201ENST00000261866 FGD6Q6ZV73 1430 aa14.79□□□□□ -0.04
SPG11-201ENST00000261866 CABP4P57796 275 aa14.79□□□□□ -0.04
SPG11-201ENST00000261866 TSR1Q2NL82 804 aaKnown RBP14.79□□□□□ -0.04
SPG11-201ENST00000261866 CPLX2Q6PUV4 134 aaKnown RBP14.79□□□□□ -0.04
SPG11-201ENST00000261866 SLC12A5Q9H2X9 1139 aa14.79□□□□□ -0.04
SPG11-201ENST00000261866 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
SPG11-201ENST00000261866 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
SPG11-201ENST00000261866 ZC3H6P61129 1189 aaKnown RBP14.78□□□□□ -0.04
SPG11-201ENST00000261866 CDCA7LQ96GN5 454 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 PHF14O94880 888 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 TPM2P07951 284 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 ATP2B1P20020 1258 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 CNNM1Q9NRU3 951 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
SPG11-201ENST00000261866 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.04
SPG11-201ENST00000261866 RBM5P52756 815 aaKnown RBP eCLIP14.77□□□□□ -0.05
SPG11-201ENST00000261866 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
SPG11-201ENST00000261866 TATP17735 454 aaPredicted RBP14.76□□□□□ -0.05
SPG11-201ENST00000261866 PLEKHO1Q53GL0 409 aaPredicted RBP14.76□□□□□ -0.05
SPG11-201ENST00000261866 RALYLQ86SE5 291 aaKnown RBP14.76□□□□□ -0.05
SPG11-201ENST00000261866 REC8O95072 547 aa14.76□□□□□ -0.05
SPG11-201ENST00000261866 NCOA2Q15596 1464 aa14.75□□□□□ -0.05
SPG11-201ENST00000261866 RNF20Q5VTR2 975 aa14.75□□□□□ -0.05
SPG11-201ENST00000261866 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
SPG11-201ENST00000261866 SKIDA1Q1XH10 827 aa14.75□□□□□ -0.05
SPG11-201ENST00000261866 TCP11L2Q8N4U5 519 aa14.75□□□□□ -0.05
SPG11-201ENST00000261866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.051e-8■■■■■ 115.4
SPG11-201ENST00000261866 ZBED9Q6R2W3 1325 aa14.74□□□□□ -0.05
SPG11-201ENST00000261866 CCAR1Q8IX12 1150 aaKnown RBP14.74□□□□□ -0.05
SPG11-201ENST00000261866 SMC3Q9UQE7 1217 aa14.74□□□□□ -0.05
SPG11-201ENST00000261866 ERC2O15083 957 aa14.74□□□□□ -0.05
SPG11-201ENST00000261866 TTC39AQ5SRH9 613 aa14.74□□□□□ -0.05
SPG11-201ENST00000261866 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
SPG11-201ENST00000261866 IBSPP21815 317 aaPredicted RBP14.73□□□□□ -0.05
SPG11-201ENST00000261866 MIS18AQ9NYP9 233 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 CCDC30Q5VVM6 783 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 TMEM132AQ24JP5 1023 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 THEMISQ8N1K5 641 aaPredicted RBP14.73□□□□□ -0.05
SPG11-201ENST00000261866 DDX11L8A8MPP1 907 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 ROCK1Q13464 1354 aa14.73□□□□□ -0.05
SPG11-201ENST00000261866 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
SPG11-201ENST00000261866 INTS3Q68E01 1043 aaKnown RBP14.72□□□□□ -0.05
SPG11-201ENST00000261866 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
SPG11-201ENST00000261866 CFTRP13569 1480 aa14.72□□□□□ -0.05
SPG11-201ENST00000261866 ZNF530Q6P9A1 599 aaPredicted RBP14.72□□□□□ -0.05
SPG11-201ENST00000261866 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
SPG11-201ENST00000261866 PRDM11Q9NQV5 511 aa14.72□□□□□ -0.05
SPG11-201ENST00000261866 NAP1L1P55209 391 aaKnown RBP14.71□□□□□ -0.05
SPG11-201ENST00000261866 DHX37Q8IY37 1157 aaKnown RBP14.71□□□□□ -0.05
SPG11-201ENST00000261866 CEBPZQ03701 1054 aaKnown RBP14.71□□□□□ -0.05
SPG11-201ENST00000261866 ATP6V1DQ9Y5K8 247 aa14.71□□□□□ -0.05
SPG11-201ENST00000261866 TPM1P09493 284 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 TWISTNBQ3B726 338 aaPredicted RBP14.7□□□□□ -0.06
SPG11-201ENST00000261866 USHBP1Q8N6Y0 703 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 PPP2R1AP30153 589 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 ANKLE2Q86XL3 938 aa14.7□□□□□ -0.06
SPG11-201ENST00000261866 GAS2L2Q8NHY3 880 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms