RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
PDGFRB-201ENST00000261799 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
PDGFRB-201ENST00000261799 PLIN1O60240 522 aa16.64■□□□□ 0.25
PDGFRB-201ENST00000261799 GNL3LQ9NVN8 582 aaKnown RBP16.64■□□□□ 0.25
PDGFRB-201ENST00000261799 PDE4CQ08493 712 aa16.64■□□□□ 0.25
PDGFRB-201ENST00000261799 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
PDGFRB-201ENST00000261799 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
PDGFRB-201ENST00000261799 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
PDGFRB-201ENST00000261799 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
PDGFRB-201ENST00000261799 EHBP1L1Q8N3D4 1523 aa16.63■□□□□ 0.25
PDGFRB-201ENST00000261799 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
PDGFRB-201ENST00000261799 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
PDGFRB-201ENST00000261799 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
PDGFRB-201ENST00000261799 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
PDGFRB-201ENST00000261799 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 ERC2O15083 957 aa16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 SLC3A2P08195 630 aaKnown RBP16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 WWC2Q6AWC2 1192 aa16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 AKNAQ7Z591 1439 aa16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
PDGFRB-201ENST00000261799 RNF20Q5VTR2 975 aa16.6■□□□□ 0.25
PDGFRB-201ENST00000261799 CPLX1O14810 134 aa16.6■□□□□ 0.25
PDGFRB-201ENST00000261799 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
PDGFRB-201ENST00000261799 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
PDGFRB-201ENST00000261799 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
PDGFRB-201ENST00000261799 BCL2L13Q9BXK5 485 aa16.58■□□□□ 0.25
PDGFRB-201ENST00000261799 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
PDGFRB-201ENST00000261799 R3HCC1Q9Y3T6 440 aaKnown RBP16.58■□□□□ 0.24
PDGFRB-201ENST00000261799 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
PDGFRB-201ENST00000261799 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
PDGFRB-201ENST00000261799 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
PDGFRB-201ENST00000261799 ERICH6BQ5W0A0 696 aa16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 MSNP26038 577 aaKnown RBP16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
PDGFRB-201ENST00000261799 TSR1Q2NL82 804 aaKnown RBP16.56■□□□□ 0.24
PDGFRB-201ENST00000261799 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
PDGFRB-201ENST00000261799 TPM3P06753 285 aa16.56■□□□□ 0.24
PDGFRB-201ENST00000261799 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
PDGFRB-201ENST00000261799 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
PDGFRB-201ENST00000261799 ADAMTS2O95450 1211 aa16.55■□□□□ 0.24
PDGFRB-201ENST00000261799 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
PDGFRB-201ENST00000261799 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
PDGFRB-201ENST00000261799 APAF1O14727 1248 aa16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 MTHFSP49914 203 aa16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 BRMS1Q9HCU9 246 aa16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 ZNF530Q6P9A1 599 aaPredicted RBP16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
PDGFRB-201ENST00000261799 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 TOM1O60784 492 aa16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 TMEM132AQ24JP5 1023 aa16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
PDGFRB-201ENST00000261799 PHF14O94880 888 aa16.52■□□□□ 0.24
PDGFRB-201ENST00000261799 ZPR1O75312 459 aa16.52■□□□□ 0.23
PDGFRB-201ENST00000261799 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 DZIP1LQ8IYY4 767 aaKnown RBP16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 ZNF652Q9Y2D9 606 aa16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 HOOK1Q9UJC3 728 aaKnown RBP16.51■□□□□ 0.23
PDGFRB-201ENST00000261799 TPM1P09493 284 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 SART3Q15020 963 aaKnown RBP16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 REC8O95072 547 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 XBP1P17861 261 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 TEX14Q8IWB6 1497 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 CABP1Q9NZU7 370 aa16.5■□□□□ 0.23
PDGFRB-201ENST00000261799 STARD3NLO95772 234 aa16.49■□□□□ 0.23
PDGFRB-201ENST00000261799 UBAP1LF5GYI3 381 aa16.49■□□□□ 0.23
PDGFRB-201ENST00000261799 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
PDGFRB-201ENST00000261799 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 MTMR7Q9Y216 660 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 IQGAP2Q13576 1575 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 MPHOSPH8Q99549 860 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
PDGFRB-201ENST00000261799 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 KIF14Q15058 1648 aa16.47■□□□□ 0.23
PDGFRB-201ENST00000261799 ANKRD20A12PQ8NF67 263 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms