RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 NEURL4Q96JN8 1562 aa24.91■■□□□ 1.58
SCARB1-201ENST00000261693 ABCA9Q8IUA7 1624 aa24.91■■□□□ 1.58
SCARB1-201ENST00000261693 USP19O94966 1318 aa24.91■■□□□ 1.58
SCARB1-201ENST00000261693 RUNDC1Q96C34 613 aa24.9■■□□□ 1.58
SCARB1-201ENST00000261693 EFCAB6Q5THR3 1501 aa24.9■■□□□ 1.58
SCARB1-201ENST00000261693 SHPRHQ149N8 1683 aa24.89■■□□□ 1.58
SCARB1-201ENST00000261693 RARSP54136 660 aaKnown RBP24.89■■□□□ 1.58
SCARB1-201ENST00000261693 VIRMAQ69YN4 1812 aaKnown RBP24.89■■□□□ 1.58
SCARB1-201ENST00000261693 PPRC1Q5VV67 1664 aaKnown RBP24.89■■□□□ 1.57
SCARB1-201ENST00000261693 RLBP1P12271 317 aa24.88■■□□□ 1.57
SCARB1-201ENST00000261693 MTHFSP49914 203 aa24.87■■□□□ 1.57
SCARB1-201ENST00000261693 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
SCARB1-201ENST00000261693 SBNO2Q9Y2G9 1366 aa24.87■■□□□ 1.57
SCARB1-201ENST00000261693 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
SCARB1-201ENST00000261693 NRXN1Q9ULB1 1477 aa24.86■■□□□ 1.57
SCARB1-201ENST00000261693 NINLQ9Y2I6 1382 aa24.86■■□□□ 1.57
SCARB1-201ENST00000261693 PCDHB15Q9Y5E8 787 aa24.85■■□□□ 1.57
SCARB1-201ENST00000261693 NUTM2DQ5VT03 806 aaPredicted RBP24.83■■□□□ 1.57
SCARB1-201ENST00000261693 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.56
SCARB1-201ENST00000261693 GGT6Q6P531 493 aa24.82■■□□□ 1.56
SCARB1-201ENST00000261693 C14orf93Q9H972 538 aaKnown RBP24.82■■□□□ 1.56
SCARB1-201ENST00000261693 ANO8Q9HCE9 1232 aaPredicted RBP24.82■■□□□ 1.56
SCARB1-201ENST00000261693 KIDINS220Q9ULH0 1771 aa24.81■■□□□ 1.56
SCARB1-201ENST00000261693 IQSEC2Q5JU85 1478 aa24.8■■□□□ 1.56
SCARB1-201ENST00000261693 ADGRB3O60242 1522 aa24.8■■□□□ 1.56
SCARB1-201ENST00000261693 PHF23Q9BUL5 403 aaPredicted RBP24.8■■□□□ 1.56
SCARB1-201ENST00000261693 WDR63Q8IWG1 891 aa24.79■■□□□ 1.56
SCARB1-201ENST00000261693 PMFBP1Q8TBY8 1022 aa24.79■■□□□ 1.56
SCARB1-201ENST00000261693 SLKQ9H2G2 1235 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-201ENST00000261693 SENP3Q9H4L4 574 aaPredicted RBP24.79■■□□□ 1.56
SCARB1-201ENST00000261693 SETBP1Q9Y6X0 1596 aa24.78■■□□□ 1.56
SCARB1-201ENST00000261693 CFAP53Q96M91 514 aa24.78■■□□□ 1.56
SCARB1-201ENST00000261693 U2AF1L5P0DN76 240 aaPredicted RBP24.78■■□□□ 1.56
SCARB1-201ENST00000261693 U2AF1Q01081 240 aaKnown RBP eCLIP24.78■■□□□ 1.563e-14■■□□□ 13.6
SCARB1-201ENST00000261693 ZC3H13Q5T200 1668 aaKnown RBP24.78■■□□□ 1.56
SCARB1-201ENST00000261693 PDZRN3Q9UPQ7 1066 aa24.77■■□□□ 1.56
SCARB1-201ENST00000261693 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
SCARB1-201ENST00000261693 NPATQ14207 1427 aa24.75■■□□□ 1.55
SCARB1-201ENST00000261693 PPLO60437 1756 aa24.75■■□□□ 1.55
SCARB1-201ENST00000261693 ADGRB1O14514 1584 aa24.75■■□□□ 1.55
SCARB1-201ENST00000261693 SAFB2Q14151 953 aaKnown RBP eCLIP24.75■■□□□ 1.55
SCARB1-201ENST00000261693 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
SCARB1-201ENST00000261693 NLRP1Q9C000 1473 aa24.74■■□□□ 1.55
SCARB1-201ENST00000261693 BECN1Q14457 450 aa24.74■■□□□ 1.55
SCARB1-201ENST00000261693 TSR2Q969E8 191 aaKnown RBP24.72■■□□□ 1.55
SCARB1-201ENST00000261693 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
SCARB1-201ENST00000261693 LMTK2Q8IWU2 1503 aa24.72■■□□□ 1.55
SCARB1-201ENST00000261693 MYH16Q9H6N6 1097 aa24.72■■□□□ 1.55
SCARB1-201ENST00000261693 CCDC27Q2M243 656 aa24.71■■□□□ 1.55
SCARB1-201ENST00000261693 RWDD1Q9H446 243 aaPredicted RBP24.71■■□□□ 1.55
SCARB1-201ENST00000261693 UPF2Q9HAU5 1272 aaKnown RBP24.69■■□□□ 1.54
SCARB1-201ENST00000261693 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
SCARB1-201ENST00000261693 FTSJ3Q8IY81 847 aaKnown RBP24.68■■□□□ 1.54
SCARB1-201ENST00000261693 AAMPQ13685 434 aa24.68■■□□□ 1.54
SCARB1-201ENST00000261693 MVPQ14764 893 aaKnown RBP24.68■■□□□ 1.54
SCARB1-201ENST00000261693 POGKQ9P215 609 aa24.67■■□□□ 1.54
SCARB1-201ENST00000261693 U2SURPO15042 1029 aaKnown RBP24.66■■□□□ 1.54
SCARB1-201ENST00000261693 TBC1D32Q96NH3 1257 aa24.66■■□□□ 1.54
SCARB1-201ENST00000261693 ZKSCAN2Q63HK3 967 aa24.66■■□□□ 1.54
SCARB1-201ENST00000261693 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
SCARB1-201ENST00000261693 ANKRD36BQ8N2N9 1353 aa24.65■■□□□ 1.54
SCARB1-201ENST00000261693 DZIP1LQ8IYY4 767 aaKnown RBP24.65■■□□□ 1.54
SCARB1-201ENST00000261693 TULP4Q9NRJ4 1543 aa24.64■■□□□ 1.54
SCARB1-201ENST00000261693 SPRYD3Q8NCJ5 442 aa24.64■■□□□ 1.54
SCARB1-201ENST00000261693 GLI2P10070 1586 aa24.64■■□□□ 1.53
SCARB1-201ENST00000261693 SMC4Q9NTJ3 1288 aa24.64■■□□□ 1.53
SCARB1-201ENST00000261693 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.64■■□□□ 1.53
SCARB1-201ENST00000261693 EXOSC9Q06265 439 aaKnown RBP24.63■■□□□ 1.53
SCARB1-201ENST00000261693 TBC1D2Q9BYX2 928 aa24.63■■□□□ 1.53
SCARB1-201ENST00000261693 STK26Q9P289 416 aa24.63■■□□□ 1.53
SCARB1-201ENST00000261693 RPGRIP1LQ68CZ1 1315 aa24.63■■□□□ 1.53
SCARB1-201ENST00000261693 GGNBP2Q9H3C7 697 aa24.63■■□□□ 1.53
SCARB1-201ENST00000261693 ANTXR1Q9H6X2 564 aa24.62■■□□□ 1.53
SCARB1-201ENST00000261693 FRMPD1Q5SYB0 1578 aa24.61■■□□□ 1.53
SCARB1-201ENST00000261693 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
SCARB1-201ENST00000261693 TRIM27P14373 513 aa24.59■■□□□ 1.53
SCARB1-201ENST00000261693 SRPK2P78362 688 aaKnown RBP24.59■■□□□ 1.53
SCARB1-201ENST00000261693 ITPRIPQ8IWB1 547 aa24.59■■□□□ 1.53
SCARB1-201ENST00000261693 VGFO15240 615 aaPredicted RBP24.59■■□□□ 1.53
SCARB1-201ENST00000261693 SSH1Q8WYL5 1049 aa24.58■■□□□ 1.53
SCARB1-201ENST00000261693 NSD2O96028 1365 aa24.58■■□□□ 1.53
SCARB1-201ENST00000261693 TMPOP42166 694 aaKnown RBP24.58■■□□□ 1.52
SCARB1-201ENST00000261693 A0A1W2PP64 1363 aa24.57■■□□□ 1.52
SCARB1-201ENST00000261693 PLEKHF1Q96S99 279 aa24.57■■□□□ 1.52
SCARB1-201ENST00000261693 TRIM35Q9UPQ4 493 aa24.57■■□□□ 1.52
SCARB1-201ENST00000261693 CD109Q6YHK3 1445 aa24.57■■□□□ 1.52
SCARB1-201ENST00000261693 ADGRB2O60241 1585 aa24.56■■□□□ 1.52
SCARB1-201ENST00000261693 ABCC3O15438 1527 aa24.56■■□□□ 1.52
SCARB1-201ENST00000261693 SIGLEC1Q9BZZ2 1709 aa24.56■■□□□ 1.52
SCARB1-201ENST00000261693 POGZQ7Z3K3 1410 aa24.56■■□□□ 1.52
SCARB1-201ENST00000261693 MFAP1P55081 439 aaKnown RBP24.56■■□□□ 1.52
SCARB1-201ENST00000261693 ZMYM3Q14202 1370 aa24.55■■□□□ 1.52
SCARB1-201ENST00000261693 HECW2Q9P2P5 1572 aa24.55■■□□□ 1.52
SCARB1-201ENST00000261693 NOB1Q9ULX3 412 aaKnown RBP24.54■■□□□ 1.52
SCARB1-201ENST00000261693 CAMSAP1Q5T5Y3 1602 aa24.54■■□□□ 1.52
SCARB1-201ENST00000261693 PUS7Q96PZ0 661 aaKnown RBP24.54■■□□□ 1.52
SCARB1-201ENST00000261693 NPM1P06748 294 aaKnown RBP eCLIP24.53■■□□□ 1.52
SCARB1-201ENST00000261693 ATF7IPQ6VMQ6 1270 aa24.52■■□□□ 1.52
SCARB1-201ENST00000261693 RAPGEF3O95398 923 aa24.52■■□□□ 1.52
SCARB1-201ENST00000261693 NCBP3Q53F19 620 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms