RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TSR2Q969E8 191 aaKnown RBP20.19■□□□□ 0.82
LMNB1-201ENST00000261366 C22orf23Q9BZE7 217 aa20.19■□□□□ 0.82
LMNB1-201ENST00000261366 SLC12A5Q9H2X9 1139 aa20.19■□□□□ 0.82
LMNB1-201ENST00000261366 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
LMNB1-201ENST00000261366 TRAK2O60296 914 aa20.18■□□□□ 0.82
LMNB1-201ENST00000261366 ATP7AQ04656 1500 aa20.18■□□□□ 0.82
LMNB1-201ENST00000261366 ADGRF5Q8IZF2 1346 aa20.18■□□□□ 0.82
LMNB1-201ENST00000261366 SYNMO15061 1565 aa20.18■□□□□ 0.82
LMNB1-201ENST00000261366 KANK1Q14678 1352 aa20.17■□□□□ 0.82
LMNB1-201ENST00000261366 ABCA9Q8IUA7 1624 aa20.17■□□□□ 0.82
LMNB1-201ENST00000261366 TRAK1Q9UPV9 953 aa20.17■□□□□ 0.82
LMNB1-201ENST00000261366 RUNDC1Q96C34 613 aa20.17■□□□□ 0.82
LMNB1-201ENST00000261366 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
LMNB1-201ENST00000261366 MTHFSP49914 203 aa20.16■□□□□ 0.82
LMNB1-201ENST00000261366 MADDQ8WXG6 1647 aa20.15■□□□□ 0.82
LMNB1-201ENST00000261366 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
LMNB1-201ENST00000261366 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.82
LMNB1-201ENST00000261366 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.82
LMNB1-201ENST00000261366 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
LMNB1-201ENST00000261366 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
LMNB1-201ENST00000261366 CHMP5Q9NZZ3 219 aa20.12■□□□□ 0.81
LMNB1-201ENST00000261366 MVPQ14764 893 aaKnown RBP20.12■□□□□ 0.81
LMNB1-201ENST00000261366 GGT6Q6P531 493 aa20.12■□□□□ 0.81
LMNB1-201ENST00000261366 SMC4Q9NTJ3 1288 aa20.12■□□□□ 0.81
LMNB1-201ENST00000261366 NSD3Q9BZ95 1437 aa20.11■□□□□ 0.81
LMNB1-201ENST00000261366 NPC1L1Q9UHC9 1359 aa20.11■□□□□ 0.81
LMNB1-201ENST00000261366 VIRMAQ69YN4 1812 aaKnown RBP20.11■□□□□ 0.81
LMNB1-201ENST00000261366 IQGAP1P46940 1657 aa20.11■□□□□ 0.81
LMNB1-201ENST00000261366 NINLQ9Y2I6 1382 aa20.11■□□□□ 0.81
LMNB1-201ENST00000261366 HSCBQ8IWL3 235 aa20.1■□□□□ 0.81
LMNB1-201ENST00000261366 DZIP1LQ8IYY4 767 aaKnown RBP20.1■□□□□ 0.81
LMNB1-201ENST00000261366 MYOM1P52179 1685 aa20.1■□□□□ 0.81
LMNB1-201ENST00000261366 ERVK-7P63135 1459 aa20.1■□□□□ 0.81
LMNB1-201ENST00000261366 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
LMNB1-201ENST00000261366 ZKSCAN2Q63HK3 967 aa20.09■□□□□ 0.81
LMNB1-201ENST00000261366 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
LMNB1-201ENST00000261366 PTPRTO14522 1441 aa20.09■□□□□ 0.81
LMNB1-201ENST00000261366 INO80Q9ULG1 1556 aaPredicted RBP20.09■□□□□ 0.81
LMNB1-201ENST00000261366 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
LMNB1-201ENST00000261366 U2SURPO15042 1029 aaKnown RBP20.08■□□□□ 0.81
LMNB1-201ENST00000261366 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
LMNB1-201ENST00000261366 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
LMNB1-201ENST00000261366 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
LMNB1-201ENST00000261366 MYH16Q9H6N6 1097 aa20.07■□□□□ 0.8
LMNB1-201ENST00000261366 POLR3AO14802 1390 aaPredicted RBP20.07■□□□□ 0.8
LMNB1-201ENST00000261366 TRPM2O94759 1503 aa20.07■□□□□ 0.8
LMNB1-201ENST00000261366 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
LMNB1-201ENST00000261366 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
LMNB1-201ENST00000261366 GRPEL1Q9HAV7 217 aa20.06■□□□□ 0.8
LMNB1-201ENST00000261366 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
LMNB1-201ENST00000261366 KDM5AP29375 1690 aaKnown RBP20.05■□□□□ 0.8
LMNB1-201ENST00000261366 UGGT1Q9NYU2 1555 aa20.05■□□□□ 0.8
LMNB1-201ENST00000261366 TRIM27P14373 513 aa20.05■□□□□ 0.8
LMNB1-201ENST00000261366 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
LMNB1-201ENST00000261366 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
LMNB1-201ENST00000261366 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
LMNB1-201ENST00000261366 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
LMNB1-201ENST00000261366 DEPDC5O75140 1603 aa20.04■□□□□ 0.8
LMNB1-201ENST00000261366 CLTCL1P53675 1640 aa20.04■□□□□ 0.8
LMNB1-201ENST00000261366 CLCN1P35523 988 aa20.03■□□□□ 0.8
LMNB1-201ENST00000261366 MRE11P49959 708 aa20.03■□□□□ 0.8
LMNB1-201ENST00000261366 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
LMNB1-201ENST00000261366 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
LMNB1-201ENST00000261366 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
LMNB1-201ENST00000261366 HSP90AB1P08238 724 aaKnown RBP20.02■□□□□ 0.8
LMNB1-201ENST00000261366 NOB1Q9ULX3 412 aaKnown RBP20.01■□□□□ 0.79
LMNB1-201ENST00000261366 HSP90AA2PQ14568 343 aaPredicted RBP20.01■□□□□ 0.79
LMNB1-201ENST00000261366 TRIM44Q96DX7 344 aaPredicted RBP20.01■□□□□ 0.79
LMNB1-201ENST00000261366 KIDINS220Q9ULH0 1771 aa20.01■□□□□ 0.79
LMNB1-201ENST00000261366 TET3O43151 1660 aa20.01■□□□□ 0.79
LMNB1-201ENST00000261366 GAS2L3Q86XJ1 694 aa20.01■□□□□ 0.79
LMNB1-201ENST00000261366 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
LMNB1-201ENST00000261366 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
LMNB1-201ENST00000261366 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
LMNB1-201ENST00000261366 VWDEQ8N2E2 1590 aa20■□□□□ 0.79
LMNB1-201ENST00000261366 CEP152O94986 1710 aa20■□□□□ 0.79
LMNB1-201ENST00000261366 STAC3Q96MF2 364 aa19.99■□□□□ 0.79
LMNB1-201ENST00000261366 ESPNB1AK53 854 aa19.99■□□□□ 0.79
LMNB1-201ENST00000261366 MROH1Q8NDA8 1641 aa19.98■□□□□ 0.79
LMNB1-201ENST00000261366 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
LMNB1-201ENST00000261366 DDX11L8A8MPP1 907 aa19.98■□□□□ 0.79
LMNB1-201ENST00000261366 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
LMNB1-201ENST00000261366 AAMPQ13685 434 aa19.97■□□□□ 0.79
LMNB1-201ENST00000261366 RBM42Q9BTD8 480 aaKnown RBP19.97■□□□□ 0.79
LMNB1-201ENST00000261366 ZNF692Q9BU19 519 aaPredicted RBP19.97■□□□□ 0.79
LMNB1-201ENST00000261366 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
LMNB1-201ENST00000261366 CD2BP2O95400 341 aaKnown RBP19.96■□□□□ 0.79
LMNB1-201ENST00000261366 ATF7IPQ6VMQ6 1270 aa19.96■□□□□ 0.79
LMNB1-201ENST00000261366 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
LMNB1-201ENST00000261366 GGNBP2Q9H3C7 697 aa19.94■□□□□ 0.78
LMNB1-201ENST00000261366 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
LMNB1-201ENST00000261366 GLIPR1L2Q4G1C9 344 aa19.94■□□□□ 0.78
LMNB1-201ENST00000261366 ANKRD45Q5TZF3 282 aa19.93■□□□□ 0.78
LMNB1-201ENST00000261366 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
LMNB1-201ENST00000261366 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
LMNB1-201ENST00000261366 SLC24A1O60721 1099 aa19.92■□□□□ 0.78
LMNB1-201ENST00000261366 NOS1P29475 1434 aa19.92■□□□□ 0.78
LMNB1-201ENST00000261366 MLH3Q9UHC1 1453 aa19.91■□□□□ 0.78
LMNB1-201ENST00000261366 HDAC1Q13547 482 aaPredicted RBP19.91■□□□□ 0.78
LMNB1-201ENST00000261366 NPATQ14207 1427 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms