RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 MBD3O95983 291 aa17.18■□□□□ 0.34
TMCC3-201ENST00000261226 GPS2Q13227 327 aa17.18■□□□□ 0.34
TMCC3-201ENST00000261226 TSR2Q969E8 191 aaKnown RBP17.18■□□□□ 0.34
TMCC3-201ENST00000261226 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
TMCC3-201ENST00000261226 ESPNB1AK53 854 aa17.18■□□□□ 0.34
TMCC3-201ENST00000261226 C11orf95C9JLR9 678 aaPredicted RBP17.18■□□□□ 0.34
TMCC3-201ENST00000261226 PTPRGP23470 1445 aa17.17■□□□□ 0.34
TMCC3-201ENST00000261226 RABEP1Q15276 862 aa17.17■□□□□ 0.34
TMCC3-201ENST00000261226 CHMP4CQ96CF2 233 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
TMCC3-201ENST00000261226 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 TEX35Q5T0J7 233 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 CABP2Q9NPB3 220 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
TMCC3-201ENST00000261226 TEFQ10587 303 aa17.15■□□□□ 0.34
TMCC3-201ENST00000261226 STAC3Q96MF2 364 aa17.15■□□□□ 0.34
TMCC3-201ENST00000261226 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
TMCC3-201ENST00000261226 FOSBP53539 338 aa17.15■□□□□ 0.34
TMCC3-201ENST00000261226 MPNDQ8N594 471 aa17.15■□□□□ 0.34
TMCC3-201ENST00000261226 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
TMCC3-201ENST00000261226 PRXQ9BXM0 1461 aa17.14■□□□□ 0.33
TMCC3-201ENST00000261226 C20orf194Q5TEA3 1177 aa17.14■□□□□ 0.33
TMCC3-201ENST00000261226 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
TMCC3-201ENST00000261226 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
TMCC3-201ENST00000261226 TSR1Q2NL82 804 aaKnown RBP17.14■□□□□ 0.33
TMCC3-201ENST00000261226 TPM1P09493 284 aa17.13■□□□□ 0.33
TMCC3-201ENST00000261226 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
TMCC3-201ENST00000261226 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
TMCC3-201ENST00000261226 GCC1Q96CN9 775 aa17.13■□□□□ 0.33
TMCC3-201ENST00000261226 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
TMCC3-201ENST00000261226 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
TMCC3-201ENST00000261226 CPLX1O14810 134 aa17.12■□□□□ 0.33
TMCC3-201ENST00000261226 MVPQ14764 893 aaKnown RBP17.12■□□□□ 0.33
TMCC3-201ENST00000261226 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
TMCC3-201ENST00000261226 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
TMCC3-201ENST00000261226 MNS1Q8NEH6 495 aa17.11■□□□□ 0.33
TMCC3-201ENST00000261226 RRP9O43818 475 aaKnown RBP17.11■□□□□ 0.33
TMCC3-201ENST00000261226 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 G3BP1Q13283 466 aaKnown RBP eCLIP17.1■□□□□ 0.33
TMCC3-201ENST00000261226 CPLX2Q6PUV4 134 aaKnown RBP17.1■□□□□ 0.33
TMCC3-201ENST00000261226 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 FIBPO43427 364 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 PDE4CQ08493 712 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
TMCC3-201ENST00000261226 ERC2O15083 957 aa17.09■□□□□ 0.33
TMCC3-201ENST00000261226 ARGLU1Q9NWB6 273 aaPredicted RBP17.09■□□□□ 0.33
TMCC3-201ENST00000261226 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
TMCC3-201ENST00000261226 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
TMCC3-201ENST00000261226 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
TMCC3-201ENST00000261226 MCM2P49736 904 aa17.08■□□□□ 0.33
TMCC3-201ENST00000261226 SETQ01105 290 aaPredicted RBP17.08■□□□□ 0.33
TMCC3-201ENST00000261226 ATF7IPQ6VMQ6 1270 aa17.08■□□□□ 0.33
TMCC3-201ENST00000261226 SPC24Q8NBT2 197 aa17.08■□□□□ 0.33
TMCC3-201ENST00000261226 UQCRHLA0A096LP55 91 aa17.08■□□□□ 0.32
TMCC3-201ENST00000261226 UQCRHP07919 91 aa17.08■□□□□ 0.32
TMCC3-201ENST00000261226 TRIM29Q14134 588 aa17.08■□□□□ 0.32
TMCC3-201ENST00000261226 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
TMCC3-201ENST00000261226 CWC22Q9HCG8 908 aaKnown RBP17.08■□□□□ 0.32
TMCC3-201ENST00000261226 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
TMCC3-201ENST00000261226 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
TMCC3-201ENST00000261226 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
TMCC3-201ENST00000261226 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
TMCC3-201ENST00000261226 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
TMCC3-201ENST00000261226 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
TMCC3-201ENST00000261226 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
TMCC3-201ENST00000261226 NAIPQ13075 1403 aa17.07■□□□□ 0.32
TMCC3-201ENST00000261226 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
TMCC3-201ENST00000261226 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
TMCC3-201ENST00000261226 CCDC70Q6NSX1 233 aa17.06■□□□□ 0.32
TMCC3-201ENST00000261226 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
TMCC3-201ENST00000261226 ERBINQ96RT1 1412 aa17.05■□□□□ 0.32
TMCC3-201ENST00000261226 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
TMCC3-201ENST00000261226 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
TMCC3-201ENST00000261226 APPP05067 770 aa17.04■□□□□ 0.32
TMCC3-201ENST00000261226 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
TMCC3-201ENST00000261226 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
TMCC3-201ENST00000261226 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
TMCC3-201ENST00000261226 WWC1Q8IX03 1113 aa17.03■□□□□ 0.32
TMCC3-201ENST00000261226 NAT10Q9H0A0 1025 aaKnown RBP17.03■□□□□ 0.32
TMCC3-201ENST00000261226 GNAI3P08754 354 aa17.02■□□□□ 0.32
TMCC3-201ENST00000261226 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.32
TMCC3-201ENST00000261226 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
TMCC3-201ENST00000261226 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.31
TMCC3-201ENST00000261226 PSMA5P28066 241 aa17.01■□□□□ 0.31
TMCC3-201ENST00000261226 PCMTD1Q96MG8 357 aaPredicted RBP17.01■□□□□ 0.31
TMCC3-201ENST00000261226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMCC3-201ENST00000261226 MARCH6O60337 910 aa17.01■□□□□ 0.31
TMCC3-201ENST00000261226 TRDNQ13061 729 aa17.01■□□□□ 0.31
TMCC3-201ENST00000261226 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
TMCC3-201ENST00000261226 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
TMCC3-201ENST00000261226 TBC1D2Q9BYX2 928 aa17■□□□□ 0.31
TMCC3-201ENST00000261226 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
TMCC3-201ENST00000261226 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
TMCC3-201ENST00000261226 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
TMCC3-201ENST00000261226 PDILTQ8N807 584 aa16.99■□□□□ 0.31
TMCC3-201ENST00000261226 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
TMCC3-201ENST00000261226 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
TMCC3-201ENST00000261226 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms