RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
CCDC90B-201ENST00000260054 TMEM94Q12767 1356 aa22.14■■□□□ 1.14
CCDC90B-201ENST00000260054 LRRC7Q96NW7 1537 aa22.14■■□□□ 1.13
CCDC90B-201ENST00000260054 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
CCDC90B-201ENST00000260054 DISP3Q9P2K9 1392 aa22.13■■□□□ 1.13
CCDC90B-201ENST00000260054 TULP4Q9NRJ4 1543 aa22.12■■□□□ 1.13
CCDC90B-201ENST00000260054 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
CCDC90B-201ENST00000260054 NALCNQ8IZF0 1738 aa22.11■■□□□ 1.13
CCDC90B-201ENST00000260054 TMF1P82094 1093 aa22.11■■□□□ 1.13
CCDC90B-201ENST00000260054 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
CCDC90B-201ENST00000260054 ADGRL3Q9HAR2 1447 aa22.1■■□□□ 1.13
CCDC90B-201ENST00000260054 NCOA3Q9Y6Q9 1424 aa22.09■■□□□ 1.13
CCDC90B-201ENST00000260054 ZNF316A6NFI3 1004 aaPredicted RBP22.09■■□□□ 1.13
CCDC90B-201ENST00000260054 SLC24A1O60721 1099 aa22.09■■□□□ 1.13
CCDC90B-201ENST00000260054 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
CCDC90B-201ENST00000260054 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
CCDC90B-201ENST00000260054 EVC2Q86UK5 1308 aa22.08■■□□□ 1.12
CCDC90B-201ENST00000260054 WASLO00401 505 aaPredicted RBP22.07■■□□□ 1.12
CCDC90B-201ENST00000260054 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
CCDC90B-201ENST00000260054 KIF7Q2M1P5 1343 aa22.05■■□□□ 1.12
CCDC90B-201ENST00000260054 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
CCDC90B-201ENST00000260054 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
CCDC90B-201ENST00000260054 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
CCDC90B-201ENST00000260054 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
CCDC90B-201ENST00000260054 CCDC7Q96M83 1385 aa22.03■■□□□ 1.12
CCDC90B-201ENST00000260054 SRPK2P78362 688 aaKnown RBP22.03■■□□□ 1.12
CCDC90B-201ENST00000260054 CDCA8Q53HL2 280 aa22.01■■□□□ 1.11
CCDC90B-201ENST00000260054 MSH6P52701 1360 aa22.01■■□□□ 1.11
CCDC90B-201ENST00000260054 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
CCDC90B-201ENST00000260054 DCCP43146 1447 aa22■■□□□ 1.11
CCDC90B-201ENST00000260054 NUTM2FA1L443 756 aa21.99■■□□□ 1.11
CCDC90B-201ENST00000260054 PUS7Q96PZ0 661 aaKnown RBP21.99■■□□□ 1.11
CCDC90B-201ENST00000260054 PRR36Q9H6K5 1346 aa21.99■■□□□ 1.11
CCDC90B-201ENST00000260054 FMN2Q9NZ56 1722 aa21.99■■□□□ 1.11
CCDC90B-201ENST00000260054 ATP7BP35670 1465 aa21.98■■□□□ 1.11
CCDC90B-201ENST00000260054 USP32Q8NFA0 1604 aa21.96■■□□□ 1.11
CCDC90B-201ENST00000260054 ATF3P18847 181 aa21.96■■□□□ 1.11
CCDC90B-201ENST00000260054 NUDT16Q96DE0 195 aaKnown RBP21.96■■□□□ 1.11
CCDC90B-201ENST00000260054 ATAD2Q6PL18 1390 aa21.96■■□□□ 1.11
CCDC90B-201ENST00000260054 CADPS2Q86UW7 1296 aa21.95■■□□□ 1.1
CCDC90B-201ENST00000260054 ANKARQ7Z5J8 1434 aa21.94■■□□□ 1.1
CCDC90B-201ENST00000260054 MST1RQ04912 1400 aa21.93■■□□□ 1.1
CCDC90B-201ENST00000260054 MYOM1P52179 1685 aa21.93■■□□□ 1.1
CCDC90B-201ENST00000260054 CCDC61Q9Y6R9 512 aa21.91■■□□□ 1.1
CCDC90B-201ENST00000260054 C1orf167Q5SNV9 1468 aa21.91■■□□□ 1.1
CCDC90B-201ENST00000260054 RGPD8O14715 1765 aaPredicted RBP21.91■■□□□ 1.1
CCDC90B-201ENST00000260054 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
CCDC90B-201ENST00000260054 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
CCDC90B-201ENST00000260054 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
CCDC90B-201ENST00000260054 CABP1Q9NZU7 370 aa21.9■■□□□ 1.1
CCDC90B-201ENST00000260054 PPIP5K1Q6PFW1 1433 aa21.9■■□□□ 1.1
CCDC90B-201ENST00000260054 CERKQ8TCT0 537 aa21.88■■□□□ 1.09
CCDC90B-201ENST00000260054 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
CCDC90B-201ENST00000260054 DDX10Q13206 875 aaKnown RBP21.87■■□□□ 1.09
CCDC90B-201ENST00000260054 ORAI2Q96SN7 254 aa21.87■■□□□ 1.09
CCDC90B-201ENST00000260054 IQSEC2Q5JU85 1478 aa21.86■■□□□ 1.09
CCDC90B-201ENST00000260054 ITSN1Q15811 1721 aa21.86■■□□□ 1.09
CCDC90B-201ENST00000260054 ESCO1Q5FWF5 840 aa21.86■■□□□ 1.09
CCDC90B-201ENST00000260054 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
CCDC90B-201ENST00000260054 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
CCDC90B-201ENST00000260054 PLEKHG3A1L390 1219 aa21.85■■□□□ 1.09
CCDC90B-201ENST00000260054 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
CCDC90B-201ENST00000260054 PHF8Q9UPP1 1060 aa21.83■■□□□ 1.09
CCDC90B-201ENST00000260054 PANK3Q9H999 370 aa21.82■■□□□ 1.08
CCDC90B-201ENST00000260054 A0A1W2PP64 1363 aa21.82■■□□□ 1.08
CCDC90B-201ENST00000260054 ANKRD36BQ8N2N9 1353 aa21.82■■□□□ 1.08
CCDC90B-201ENST00000260054 ACEP12821 1306 aa21.81■■□□□ 1.08
CCDC90B-201ENST00000260054 CPSF1Q10570 1443 aaKnown RBP21.81■■□□□ 1.08
CCDC90B-201ENST00000260054 POLR3AO14802 1390 aaPredicted RBP21.8■■□□□ 1.08
CCDC90B-201ENST00000260054 BRINP3Q76B58 766 aa21.8■■□□□ 1.08
CCDC90B-201ENST00000260054 TERF2IPQ9NYB0 399 aa21.79■■□□□ 1.08
CCDC90B-201ENST00000260054 TOM1O60784 492 aa21.78■■□□□ 1.08
CCDC90B-201ENST00000260054 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
CCDC90B-201ENST00000260054 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
CCDC90B-201ENST00000260054 CARD14Q9BXL6 1004 aa21.78■■□□□ 1.08
CCDC90B-201ENST00000260054 KIF1AQ12756 1690 aa21.77■■□□□ 1.08
CCDC90B-201ENST00000260054 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
CCDC90B-201ENST00000260054 FOXO3O43524 673 aa21.76■■□□□ 1.07
CCDC90B-201ENST00000260054 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
CCDC90B-201ENST00000260054 KTN1Q86UP2 1357 aaKnown RBP21.75■■□□□ 1.07
CCDC90B-201ENST00000260054 PER1O15534 1290 aaPredicted RBP21.75■■□□□ 1.07
CCDC90B-201ENST00000260054 ZNF692Q9BU19 519 aaPredicted RBP21.75■■□□□ 1.07
CCDC90B-201ENST00000260054 USP6P35125 1406 aa21.74■■□□□ 1.07
CCDC90B-201ENST00000260054 MON2Q7Z3U7 1717 aa21.73■■□□□ 1.07
CCDC90B-201ENST00000260054 NSD3Q9BZ95 1437 aa21.73■■□□□ 1.07
CCDC90B-201ENST00000260054 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
CCDC90B-201ENST00000260054 ROBO1Q9Y6N7 1651 aa21.73■■□□□ 1.07
CCDC90B-201ENST00000260054 PIP4K2BP78356 416 aa21.71■■□□□ 1.07
CCDC90B-201ENST00000260054 XPCQ01831 940 aaPredicted RBP21.71■■□□□ 1.07
CCDC90B-201ENST00000260054 EDC4Q6P2E9 1401 aaKnown RBP21.71■■□□□ 1.07
CCDC90B-201ENST00000260054 SSH2Q76I76 1423 aa21.71■■□□□ 1.07
CCDC90B-201ENST00000260054 NPHP3Q7Z494 1330 aa21.7■■□□□ 1.06
CCDC90B-201ENST00000260054 NRKQ7Z2Y5 1582 aa21.7■■□□□ 1.06
CCDC90B-201ENST00000260054 PSME1Q06323 249 aa21.7■■□□□ 1.06
CCDC90B-201ENST00000260054 KNSTRNQ9Y448 316 aa21.69■■□□□ 1.06
CCDC90B-201ENST00000260054 KRT28Q7Z3Y7 464 aa21.68■■□□□ 1.06
CCDC90B-201ENST00000260054 PXDNQ92626 1479 aa21.67■■□□□ 1.06
CCDC90B-201ENST00000260054 TTC21BQ7Z4L5 1316 aa21.67■■□□□ 1.06
CCDC90B-201ENST00000260054 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
CCDC90B-201ENST00000260054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.67■■□□□ 1.063e-6■■■■□ 25.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms