RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 RNF214Q8ND24 703 aa18.61■□□□□ 0.57
KCTD3-201ENST00000259154 CFAP70Q5T0N1 1121 aa18.61■□□□□ 0.57
KCTD3-201ENST00000259154 TRPM1Q7Z4N2 1603 aa18.59■□□□□ 0.57
KCTD3-201ENST00000259154 IQGAP3Q86VI3 1631 aa18.59■□□□□ 0.57
KCTD3-201ENST00000259154 C22orf23Q9BZE7 217 aa18.59■□□□□ 0.57
KCTD3-201ENST00000259154 ANKRD45Q5TZF3 282 aa18.59■□□□□ 0.57
KCTD3-201ENST00000259154 SPINK5Q9NQ38 1064 aaPredicted RBP18.59■□□□□ 0.57
KCTD3-201ENST00000259154 CHMP5Q9NZZ3 219 aa18.59■□□□□ 0.57
KCTD3-201ENST00000259154 DEPDC5O75140 1603 aa18.58■□□□□ 0.57
KCTD3-201ENST00000259154 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
KCTD3-201ENST00000259154 CDK11BP21127 795 aaKnown RBP18.57■□□□□ 0.56
KCTD3-201ENST00000259154 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
KCTD3-201ENST00000259154 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
KCTD3-201ENST00000259154 PLCH2O75038 1416 aa18.56■□□□□ 0.56
KCTD3-201ENST00000259154 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
KCTD3-201ENST00000259154 PLEKHH1Q9ULM0 1364 aa18.56■□□□□ 0.56
KCTD3-201ENST00000259154 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
KCTD3-201ENST00000259154 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
KCTD3-201ENST00000259154 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
KCTD3-201ENST00000259154 DDX11L8A8MPP1 907 aa18.54■□□□□ 0.56
KCTD3-201ENST00000259154 WASHC2CQ9Y4E1 1318 aa18.53■□□□□ 0.56
KCTD3-201ENST00000259154 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
KCTD3-201ENST00000259154 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
KCTD3-201ENST00000259154 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
KCTD3-201ENST00000259154 ESPNB1AK53 854 aa18.52■□□□□ 0.56
KCTD3-201ENST00000259154 MCTP1Q6DN14 999 aa18.52■□□□□ 0.56
KCTD3-201ENST00000259154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.52■□□□□ 0.55
KCTD3-201ENST00000259154 DRC7Q8IY82 874 aa18.52■□□□□ 0.55
KCTD3-201ENST00000259154 PRDM10Q9NQV6 1147 aa18.52■□□□□ 0.55
KCTD3-201ENST00000259154 E9PCH4 1651 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 E9PSI1 815 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 MRE11P49959 708 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 MCM4P33991 863 aa18.51■□□□□ 0.55
KCTD3-201ENST00000259154 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
KCTD3-201ENST00000259154 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
KCTD3-201ENST00000259154 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
KCTD3-201ENST00000259154 SCAPERQ9BY12 1400 aa18.49■□□□□ 0.55
KCTD3-201ENST00000259154 NASPP49321 788 aaPredicted RBP18.49■□□□□ 0.55
KCTD3-201ENST00000259154 WDR7Q9Y4E6 1490 aa18.49■□□□□ 0.55
KCTD3-201ENST00000259154 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
KCTD3-201ENST00000259154 RRAGDQ9NQL2 400 aaPredicted RBP18.49■□□□□ 0.55
KCTD3-201ENST00000259154 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
KCTD3-201ENST00000259154 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
KCTD3-201ENST00000259154 CAVIN1Q6NZI2 390 aaKnown RBP18.49■□□□□ 0.55
KCTD3-201ENST00000259154 VWDEQ8N2E2 1590 aa18.48■□□□□ 0.55
KCTD3-201ENST00000259154 GRPEL1Q9HAV7 217 aa18.48■□□□□ 0.55
KCTD3-201ENST00000259154 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
KCTD3-201ENST00000259154 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
KCTD3-201ENST00000259154 SEC24BO95487 1268 aa18.47■□□□□ 0.55
KCTD3-201ENST00000259154 DUSP27Q5VZP5 1158 aa18.46■□□□□ 0.55
KCTD3-201ENST00000259154 MROH1Q8NDA8 1641 aa18.46■□□□□ 0.55
KCTD3-201ENST00000259154 C1orf115Q9H7X2 142 aa18.46■□□□□ 0.55
KCTD3-201ENST00000259154 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
KCTD3-201ENST00000259154 IGHDP01880 384 aa18.45■□□□□ 0.54
KCTD3-201ENST00000259154 PODXL2Q9NZ53 605 aa18.45■□□□□ 0.54
KCTD3-201ENST00000259154 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
KCTD3-201ENST00000259154 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
KCTD3-201ENST00000259154 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
KCTD3-201ENST00000259154 ATP10AO60312 1499 aa18.44■□□□□ 0.54
KCTD3-201ENST00000259154 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
KCTD3-201ENST00000259154 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
KCTD3-201ENST00000259154 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
KCTD3-201ENST00000259154 XRCC6P12956 609 aaKnown RBP eCLIP18.43■□□□□ 0.54
KCTD3-201ENST00000259154 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
KCTD3-201ENST00000259154 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
KCTD3-201ENST00000259154 NAP1L2Q9ULW6 460 aaPredicted RBP18.43■□□□□ 0.54
KCTD3-201ENST00000259154 DZIP1LQ8IYY4 767 aaKnown RBP18.42■□□□□ 0.54
KCTD3-201ENST00000259154 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
KCTD3-201ENST00000259154 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
KCTD3-201ENST00000259154 TNNQ9UQP3 1299 aa18.41■□□□□ 0.54
KCTD3-201ENST00000259154 KIDINS220Q9ULH0 1771 aa18.41■□□□□ 0.54
KCTD3-201ENST00000259154 KCNJ4P48050 445 aa18.41■□□□□ 0.54
KCTD3-201ENST00000259154 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
KCTD3-201ENST00000259154 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
KCTD3-201ENST00000259154 RTEL1-TNFRSF6BF6WH68 1400 aa18.39■□□□□ 0.53
KCTD3-201ENST00000259154 GOLGA6L4A6NEF3 574 aa18.39■□□□□ 0.53
KCTD3-201ENST00000259154 TCP11L2Q8N4U5 519 aa18.39■□□□□ 0.53
KCTD3-201ENST00000259154 BLMP54132 1417 aaPredicted RBP18.39■□□□□ 0.53
KCTD3-201ENST00000259154 C8orf34Q49A92 452 aa18.39■□□□□ 0.53
KCTD3-201ENST00000259154 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
KCTD3-201ENST00000259154 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
KCTD3-201ENST00000259154 LAMC1P11047 1609 aa18.36■□□□□ 0.53
KCTD3-201ENST00000259154 XPCQ01831 940 aaPredicted RBP18.36■□□□□ 0.53
KCTD3-201ENST00000259154 CLTCL1P53675 1640 aa18.35■□□□□ 0.53
KCTD3-201ENST00000259154 RRP9O43818 475 aaKnown RBP18.35■□□□□ 0.53
KCTD3-201ENST00000259154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.532e-7■■■■■ 32.2
KCTD3-201ENST00000259154 CEP152O94986 1710 aa18.34■□□□□ 0.53
KCTD3-201ENST00000259154 ASXL2Q76L83 1435 aa18.34■□□□□ 0.53
KCTD3-201ENST00000259154 NUTM2FA1L443 756 aa18.34■□□□□ 0.53
KCTD3-201ENST00000259154 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
KCTD3-201ENST00000259154 ZNF592Q92610 1267 aa18.34■□□□□ 0.53
KCTD3-201ENST00000259154 SLFN5Q08AF3 891 aa18.33■□□□□ 0.53
KCTD3-201ENST00000259154 RILPL2Q969X0 211 aa18.33■□□□□ 0.53
KCTD3-201ENST00000259154 RNF17Q9BXT8 1623 aaKnown RBP18.33■□□□□ 0.53
KCTD3-201ENST00000259154 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.53
KCTD3-201ENST00000259154 NEURL4Q96JN8 1562 aa18.33■□□□□ 0.53
KCTD3-201ENST00000259154 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms