RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 RARSP54136 660 aaKnown RBP14.56□□□□□ -0.08
TROAP-201ENST00000257909 SPRYD3Q8NCJ5 442 aa14.55□□□□□ -0.08
TROAP-201ENST00000257909 TRIM44Q96DX7 344 aaPredicted RBP14.54□□□□□ -0.08
TROAP-201ENST00000257909 RTEL1-TNFRSF6BF6WH68 1400 aa14.53□□□□□ -0.08
TROAP-201ENST00000257909 POLR3AO14802 1390 aaPredicted RBP14.53□□□□□ -0.08
TROAP-201ENST00000257909 SPHKAPQ2M3C7 1700 aa14.53□□□□□ -0.08
TROAP-201ENST00000257909 TPM2P07951 284 aa14.53□□□□□ -0.08
TROAP-201ENST00000257909 HSCBQ8IWL3 235 aa14.53□□□□□ -0.08
TROAP-201ENST00000257909 DUOX2Q9NRD8 1548 aa14.53□□□□□ -0.08
TROAP-201ENST00000257909 ERCC6L2Q5T890 1561 aa14.52□□□□□ -0.08
TROAP-201ENST00000257909 SHROOM2Q13796 1616 aa14.52□□□□□ -0.08
TROAP-201ENST00000257909 PTMSP20962 102 aa14.52□□□□□ -0.09
TROAP-201ENST00000257909 CEP152O94986 1710 aa14.51□□□□□ -0.09
TROAP-201ENST00000257909 RLBP1P12271 317 aa14.51□□□□□ -0.09
TROAP-201ENST00000257909 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
TROAP-201ENST00000257909 NCOA3Q9Y6Q9 1424 aa14.51□□□□□ -0.09
TROAP-201ENST00000257909 SKOR2Q2VWA4 1001 aaPredicted RBP14.5□□□□□ -0.09
TROAP-201ENST00000257909 ZNF692Q9BU19 519 aaPredicted RBP14.5□□□□□ -0.09
TROAP-201ENST00000257909 MFAP1P55081 439 aaKnown RBP14.5□□□□□ -0.09
TROAP-201ENST00000257909 ERBB4Q15303 1308 aa14.49□□□□□ -0.09
TROAP-201ENST00000257909 CIZ1Q9ULV3 898 aaPredicted RBP14.49□□□□□ -0.09
TROAP-201ENST00000257909 RUNDC1Q96C34 613 aa14.49□□□□□ -0.09
TROAP-201ENST00000257909 KANK1Q14678 1352 aa14.48□□□□□ -0.09
TROAP-201ENST00000257909 DDIT3P35638 169 aa14.48□□□□□ -0.09
TROAP-201ENST00000257909 MVPQ14764 893 aaKnown RBP14.48□□□□□ -0.09
TROAP-201ENST00000257909 GBP4Q96PP9 640 aa14.48□□□□□ -0.09
TROAP-201ENST00000257909 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
TROAP-201ENST00000257909 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
TROAP-201ENST00000257909 SNX21Q969T3 373 aa14.48□□□□□ -0.09
TROAP-201ENST00000257909 CLTCL1P53675 1640 aa14.47□□□□□ -0.09
TROAP-201ENST00000257909 PDCL3Q9H2J4 239 aa14.47□□□□□ -0.09
TROAP-201ENST00000257909 ABCC1P33527 1531 aa14.47□□□□□ -0.09
TROAP-201ENST00000257909 IQSEC2Q5JU85 1478 aa14.47□□□□□ -0.09
TROAP-201ENST00000257909 CCDC27Q2M243 656 aa14.46□□□□□ -0.09
TROAP-201ENST00000257909 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.1
TROAP-201ENST00000257909 SMC5Q8IY18 1101 aa14.46□□□□□ -0.1
TROAP-201ENST00000257909 TNNQ9UQP3 1299 aa14.46□□□□□ -0.1
TROAP-201ENST00000257909 SHPRHQ149N8 1683 aa14.46□□□□□ -0.1
TROAP-201ENST00000257909 RBM25P49756 843 aaKnown RBP14.45□□□□□ -0.1
TROAP-201ENST00000257909 HDAC1Q13547 482 aaPredicted RBP14.45□□□□□ -0.1
TROAP-201ENST00000257909 TRPM2O94759 1503 aa14.45□□□□□ -0.1
TROAP-201ENST00000257909 ZKSCAN2Q63HK3 967 aa14.45□□□□□ -0.1
TROAP-201ENST00000257909 CARD14Q9BXL6 1004 aa14.45□□□□□ -0.1
TROAP-201ENST00000257909 CCDC173Q0VFZ6 552 aa14.44□□□□□ -0.1
TROAP-201ENST00000257909 TCP11L2Q8N4U5 519 aa14.44□□□□□ -0.1
TROAP-201ENST00000257909 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
TROAP-201ENST00000257909 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
TROAP-201ENST00000257909 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
TROAP-201ENST00000257909 NEUROD2Q15784 382 aa14.44□□□□□ -0.1
TROAP-201ENST00000257909 FTSJ3Q8IY81 847 aaKnown RBP14.44□□□□□ -0.1
TROAP-201ENST00000257909 TRAPPC8Q9Y2L5 1435 aa14.43□□□□□ -0.1
TROAP-201ENST00000257909 CT47B1P0C2W7 299 aaPredicted RBP14.43□□□□□ -0.1
TROAP-201ENST00000257909 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
TROAP-201ENST00000257909 BCL2L13Q9BXK5 485 aa14.43□□□□□ -0.1
TROAP-201ENST00000257909 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
TROAP-201ENST00000257909 GAS2L3Q86XJ1 694 aa14.43□□□□□ -0.1
TROAP-201ENST00000257909 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
TROAP-201ENST00000257909 ANP32BQ92688 251 aaKnown RBP14.42□□□□□ -0.1
TROAP-201ENST00000257909 PPP1R9BQ96SB3 815 aa14.42□□□□□ -0.1
TROAP-201ENST00000257909 RRP7AQ9Y3A4 280 aaKnown RBP14.42□□□□□ -0.1
TROAP-201ENST00000257909 TERF1P54274 439 aa14.41□□□□□ -0.1
TROAP-201ENST00000257909 HSP90AB1P08238 724 aaKnown RBP14.41□□□□□ -0.1
TROAP-201ENST00000257909 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 PLCH2O75038 1416 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 KIAA1211Q6ZU35 1233 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 ZSCAN30Q86W11 494 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 DDX19BQ9UMR2 479 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 PTPRTO14522 1441 aa14.4□□□□□ -0.1
TROAP-201ENST00000257909 IBTKQ9P2D0 1353 aaPredicted RBP14.39□□□□□ -0.11
TROAP-201ENST00000257909 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
TROAP-201ENST00000257909 TET3O43151 1660 aa14.39□□□□□ -0.11
TROAP-201ENST00000257909 GOLGA6L22H0YM25 854 aa14.39□□□□□ -0.11
TROAP-201ENST00000257909 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.39□□□□□ -0.11
TROAP-201ENST00000257909 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
TROAP-201ENST00000257909 OFD1O75665 1012 aa14.38□□□□□ -0.11
TROAP-201ENST00000257909 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
TROAP-201ENST00000257909 ABCA6Q8N139 1617 aa14.38□□□□□ -0.11
TROAP-201ENST00000257909 NASPP49321 788 aaPredicted RBP14.38□□□□□ -0.11
TROAP-201ENST00000257909 MSNP26038 577 aaKnown RBP14.37□□□□□ -0.11
TROAP-201ENST00000257909 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
TROAP-201ENST00000257909 IFT172Q9UG01 1749 aa14.37□□□□□ -0.11
TROAP-201ENST00000257909 CLEC17AQ6ZS10 378 aa14.36□□□□□ -0.11
TROAP-201ENST00000257909 MAP7D2Q96T17 732 aa14.36□□□□□ -0.11
TROAP-201ENST00000257909 ADGRL1O94910 1474 aa14.36□□□□□ -0.11
TROAP-201ENST00000257909 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
TROAP-201ENST00000257909 ZNF518AQ6AHZ1 1483 aa14.36□□□□□ -0.11
TROAP-201ENST00000257909 UGGT1Q9NYU2 1555 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 CALD1Q05682 793 aaKnown RBP14.35□□□□□ -0.11
TROAP-201ENST00000257909 HS1BP3Q53T59 392 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 NSD3Q9BZ95 1437 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 MROH2AA6NES4 1674 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 VWDEQ8N2E2 1590 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 MYOM2P54296 1465 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 MAP3K4Q9Y6R4 1608 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 SMC4Q9NTJ3 1288 aa14.35□□□□□ -0.11
TROAP-201ENST00000257909 TRIM27P14373 513 aa14.34□□□□□ -0.11
TROAP-201ENST00000257909 NUCB1Q02818 461 aa14.34□□□□□ -0.11
TROAP-201ENST00000257909 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
TROAP-201ENST00000257909 K7ELQ4 463 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms