RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 TRAK1Q9UPV9 953 aa32.21■■■□□ 2.75
LMO2-201ENST00000257818 IL27Q8NEV9 243 aa32.21■■■□□ 2.75
LMO2-201ENST00000257818 AGLP35573 1532 aa32.2■■■□□ 2.75
LMO2-201ENST00000257818 MLECQ14165 292 aa32.2■■■□□ 2.74
LMO2-201ENST00000257818 MYO5BQ9ULV0 1848 aa32.19■■■□□ 2.74
LMO2-201ENST00000257818 VGFO15240 615 aaPredicted RBP32.19■■■□□ 2.74
LMO2-201ENST00000257818 ERVK-7P63135 1459 aa32.18■■■□□ 2.74
LMO2-201ENST00000257818 ASXL1Q8IXJ9 1541 aa32.18■■■□□ 2.74
LMO2-201ENST00000257818 ADGRB1O14514 1584 aa32.18■■■□□ 2.74
LMO2-201ENST00000257818 KDM5AP29375 1690 aaKnown RBP32.18■■■□□ 2.74
LMO2-201ENST00000257818 MYOM1P52179 1685 aa32.17■■■□□ 2.74
LMO2-201ENST00000257818 SLFN5Q08AF3 891 aa32.17■■■□□ 2.74
LMO2-201ENST00000257818 C8orf34Q49A92 452 aa32.17■■■□□ 2.74
LMO2-201ENST00000257818 MYO3AQ8NEV4 1616 aa32.16■■■□□ 2.74
LMO2-201ENST00000257818 CENPJQ9HC77 1338 aaPredicted RBP32.15■■■□□ 2.74
LMO2-201ENST00000257818 CLTCQ00610 1675 aaKnown RBP32.15■■■□□ 2.74
LMO2-201ENST00000257818 SLC4A3P48751 1232 aa32.15■■■□□ 2.74
LMO2-201ENST00000257818 SENP3Q9H4L4 574 aaPredicted RBP32.15■■■□□ 2.74
LMO2-201ENST00000257818 FAM161AQ3B820 660 aa32.14■■■□□ 2.74
LMO2-201ENST00000257818 SLC24A1O60721 1099 aa32.14■■■□□ 2.73
LMO2-201ENST00000257818 TMEM131LA2VDJ0 1609 aa32.13■■■□□ 2.73
LMO2-201ENST00000257818 TRMT2AQ8IZ69 625 aaKnown RBP32.13■■■□□ 2.73
LMO2-201ENST00000257818 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.12■■■□□ 2.73
LMO2-201ENST00000257818 PPP6R1Q9UPN7 881 aa32.12■■■□□ 2.73
LMO2-201ENST00000257818 ARHGEF40Q8TER5 1519 aa32.11■■■□□ 2.73
LMO2-201ENST00000257818 CCDC146Q8IYE0 955 aa32.1■■■□□ 2.73
LMO2-201ENST00000257818 SPINK5Q9NQ38 1064 aaPredicted RBP32.1■■■□□ 2.73
LMO2-201ENST00000257818 NPC1L1Q9UHC9 1359 aa32.09■■■□□ 2.73
LMO2-201ENST00000257818 NFKBIBQ15653 356 aa32.09■■■□□ 2.73
LMO2-201ENST00000257818 SBNO2Q9Y2G9 1366 aa32.08■■■□□ 2.73
LMO2-201ENST00000257818 QRICH2Q9H0J4 1663 aa32.06■■■□□ 2.72
LMO2-201ENST00000257818 ZFYVE9O95405 1425 aa32.04■■■□□ 2.72
LMO2-201ENST00000257818 NKTRP30414 1462 aaKnown RBP32.03■■■□□ 2.72
LMO2-201ENST00000257818 STAG3Q9UJ98 1225 aa32.03■■■□□ 2.72
LMO2-201ENST00000257818 APAF1O14727 1248 aa32.02■■■□□ 2.72
LMO2-201ENST00000257818 RGS3P49796 1198 aa32.02■■■□□ 2.72
LMO2-201ENST00000257818 BCAR3O75815 825 aa32■■■□□ 2.71
LMO2-201ENST00000257818 GSE1Q14687 1217 aa32■■■□□ 2.71
LMO2-201ENST00000257818 DAXXQ9UER7 740 aaPredicted RBP31.99■■■□□ 2.71
LMO2-201ENST00000257818 RTN4Q9NQC3 1192 aaKnown RBP31.98■■■□□ 2.71
LMO2-201ENST00000257818 ARHGEF28Q8N1W1 1705 aaKnown RBP31.98■■■□□ 2.71
LMO2-201ENST00000257818 CARD14Q9BXL6 1004 aa31.97■■■□□ 2.71
LMO2-201ENST00000257818 SPATA31D1Q6ZQQ2 1576 aa31.96■■■□□ 2.71
LMO2-201ENST00000257818 STK26Q9P289 416 aa31.96■■■□□ 2.71
LMO2-201ENST00000257818 DMRT2Q9Y5R5 561 aa31.96■■■□□ 2.71
LMO2-201ENST00000257818 ESF1Q9H501 851 aaKnown RBP31.94■■■□□ 2.7
LMO2-201ENST00000257818 E9PSI1 815 aa31.93■■■□□ 2.7
LMO2-201ENST00000257818 SAFB2Q14151 953 aaKnown RBP eCLIP31.92■■■□□ 2.7
LMO2-201ENST00000257818 ZMYM3Q14202 1370 aa31.9■■■□□ 2.7
LMO2-201ENST00000257818 IGHDP01880 384 aa31.9■■■□□ 2.7
LMO2-201ENST00000257818 SLC12A5Q9H2X9 1139 aa31.9■■■□□ 2.7
LMO2-201ENST00000257818 A2ML1A8K2U0 1454 aa31.89■■■□□ 2.7
LMO2-201ENST00000257818 FRAT1Q92837 279 aaPredicted RBP31.88■■■□□ 2.69
LMO2-201ENST00000257818 ANO8Q9HCE9 1232 aaPredicted RBP31.87■■■□□ 2.69
LMO2-201ENST00000257818 VIRMAQ69YN4 1812 aaKnown RBP31.87■■■□□ 2.69
LMO2-201ENST00000257818 BRPF3Q9ULD4 1205 aa31.86■■■□□ 2.69
LMO2-201ENST00000257818 EVC2Q86UK5 1308 aa31.85■■■□□ 2.69
LMO2-201ENST00000257818 TULP4Q9NRJ4 1543 aa31.85■■■□□ 2.69
LMO2-201ENST00000257818 ALKQ9UM73 1620 aa31.84■■■□□ 2.69
LMO2-201ENST00000257818 USP19O94966 1318 aa31.83■■■□□ 2.69
LMO2-201ENST00000257818 FRAT2O75474 233 aaPredicted RBP31.82■■■□□ 2.68
LMO2-201ENST00000257818 YTHDC2Q9H6S0 1430 aaKnown RBP31.82■■■□□ 2.68
LMO2-201ENST00000257818 RIMS2Q9UQ26 1411 aa31.82■■■□□ 2.68
LMO2-201ENST00000257818 PDE3AQ14432 1141 aa31.82■■■□□ 2.68
LMO2-201ENST00000257818 NGEFQ8N5V2 710 aa31.82■■■□□ 2.68
LMO2-201ENST00000257818 CGNL1Q0VF96 1302 aa31.81■■■□□ 2.68
LMO2-201ENST00000257818 CABP2Q9NPB3 220 aa31.81■■■□□ 2.68
LMO2-201ENST00000257818 NSD3Q9BZ95 1437 aa31.8■■■□□ 2.68
LMO2-201ENST00000257818 PTPRMP28827 1452 aa31.79■■■□□ 2.68
LMO2-201ENST00000257818 PRAM1Q96QH2 718 aa31.79■■■□□ 2.68
LMO2-201ENST00000257818 WWC1Q8IX03 1113 aa31.78■■■□□ 2.68
LMO2-201ENST00000257818 PANK1Q8TE04 598 aa31.77■■■□□ 2.68
LMO2-201ENST00000257818 CLUAP1Q96AJ1 413 aa31.77■■■□□ 2.68
LMO2-201ENST00000257818 POLR3AO14802 1390 aaPredicted RBP31.77■■■□□ 2.68
LMO2-201ENST00000257818 NINLQ9Y2I6 1382 aa31.76■■■□□ 2.67
LMO2-201ENST00000257818 PUS7Q96PZ0 661 aaKnown RBP31.75■■■□□ 2.67
LMO2-201ENST00000257818 POGKQ9P215 609 aa31.75■■■□□ 2.67
LMO2-201ENST00000257818 COG6Q9Y2V7 657 aa31.75■■■□□ 2.67
LMO2-201ENST00000257818 MINK1Q8N4C8 1332 aaPredicted RBP31.74■■■□□ 2.67
LMO2-201ENST00000257818 SEC24BO95487 1268 aa31.73■■■□□ 2.67
LMO2-201ENST00000257818 SHPRHQ149N8 1683 aa31.72■■■□□ 2.67
LMO2-201ENST00000257818 SRPK2P78362 688 aaKnown RBP31.72■■■□□ 2.67
LMO2-201ENST00000257818 TNRQ92752 1358 aa31.71■■■□□ 2.67
LMO2-201ENST00000257818 MAPK8IP3Q9UPT6 1336 aa31.7■■■□□ 2.67
LMO2-201ENST00000257818 CANXP27824 592 aaKnown RBP31.7■■■□□ 2.66
LMO2-201ENST00000257818 TRHP20396 242 aaPredicted RBP31.69■■■□□ 2.66
LMO2-201ENST00000257818 NLRP1Q9C000 1473 aa31.67■■■□□ 2.66
LMO2-201ENST00000257818 MORC1Q86VD1 984 aa31.67■■■□□ 2.66
LMO2-201ENST00000257818 ANKRD36BQ8N2N9 1353 aa31.66■■■□□ 2.66
LMO2-201ENST00000257818 SETD1AO15047 1707 aaKnown RBP31.66■■■□□ 2.66
LMO2-201ENST00000257818 TNNT2P45379 298 aaPredicted RBP31.66■■■□□ 2.66
LMO2-201ENST00000257818 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.65■■■□□ 2.66
LMO2-201ENST00000257818 RARSP54136 660 aaKnown RBP31.64■■■□□ 2.66
LMO2-201ENST00000257818 IQSEC2Q5JU85 1478 aa31.63■■■□□ 2.65
LMO2-201ENST00000257818 RRP7AQ9Y3A4 280 aaKnown RBP31.63■■■□□ 2.65
LMO2-201ENST00000257818 CEBPAP49715 358 aaPredicted RBP31.63■■■□□ 2.65
LMO2-201ENST00000257818 NEUROD2Q15784 382 aa31.63■■■□□ 2.65
LMO2-201ENST00000257818 WAPLQ7Z5K2 1190 aa31.63■■■□□ 2.65
LMO2-201ENST00000257818 NRXN3Q9Y4C0 1643 aa31.62■■■□□ 2.65
LMO2-201ENST00000257818 USP32Q8NFA0 1604 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms