RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.43
TRPM1-201ENST00000256552 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 ELL2O00472 640 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-201ENST00000256552 TPM1P09493 284 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
TRPM1-201ENST00000256552 USP8P40818 1118 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 RABEP1Q15276 862 aa12.33□□□□□ -0.44
TRPM1-201ENST00000256552 H0YHG0 523 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
TRPM1-201ENST00000256552 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 SYCE3A1L190 88 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 CREBRFQ8IUR6 639 aa12.32□□□□□ -0.44
TRPM1-201ENST00000256552 C20orf194Q5TEA3 1177 aa12.31□□□□□ -0.44
TRPM1-201ENST00000256552 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
TRPM1-201ENST00000256552 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
TRPM1-201ENST00000256552 RSPH4AQ5TD94 716 aa12.31□□□□□ -0.44
TRPM1-201ENST00000256552 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
TRPM1-201ENST00000256552 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
TRPM1-201ENST00000256552 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
TRPM1-201ENST00000256552 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
TRPM1-201ENST00000256552 RUFY1Q96T51 708 aa12.3□□□□□ -0.44
TRPM1-201ENST00000256552 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
TRPM1-201ENST00000256552 FAM184AQ8NB25 1140 aa12.3□□□□□ -0.44
TRPM1-201ENST00000256552 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
TRPM1-201ENST00000256552 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
TRPM1-201ENST00000256552 GPATCH3Q96I76 525 aa12.29□□□□□ -0.44
TRPM1-201ENST00000256552 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
TRPM1-201ENST00000256552 TDO2P48775 406 aa12.28□□□□□ -0.44
TRPM1-201ENST00000256552 STK31Q9BXU1 1019 aa12.28□□□□□ -0.44
TRPM1-201ENST00000256552 HS1BP3Q53T59 392 aa12.28□□□□□ -0.44
TRPM1-201ENST00000256552 RUNDC1Q96C34 613 aa12.28□□□□□ -0.44
TRPM1-201ENST00000256552 NEK4P51957 841 aa12.27□□□□□ -0.44
TRPM1-201ENST00000256552 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.44
TRPM1-201ENST00000256552 BANK1Q8NDB2 785 aa12.27□□□□□ -0.45
TRPM1-201ENST00000256552 FIBPO43427 364 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 ZRSR2Q15696 482 aaKnown RBP12.26□□□□□ -0.45
TRPM1-201ENST00000256552 GIMAP7Q8NHV1 300 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 TNNT1P13805 278 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 SKIDA1Q1XH10 827 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 NBPF8Q3BBV2 869 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-201ENST00000256552 FEZ1Q99689 392 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
TRPM1-201ENST00000256552 NACADO15069 1562 aa12.25□□□□□ -0.45
TRPM1-201ENST00000256552 SSFA2P28290 1259 aa12.25□□□□□ -0.45
TRPM1-201ENST00000256552 RBM28Q9NW13 759 aaKnown RBP12.25□□□□□ -0.45
TRPM1-201ENST00000256552 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-201ENST00000256552 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
TRPM1-201ENST00000256552 SOX12O15370 315 aa12.25□□□□□ -0.45
TRPM1-201ENST00000256552 IPO7O95373 1038 aaKnown RBP12.25□□□□□ -0.45
TRPM1-201ENST00000256552 CCDC192P0DO97 292 aa12.25□□□□□ -0.45
TRPM1-201ENST00000256552 HSP90AB3PQ58FF7 597 aa12.24□□□□□ -0.45
TRPM1-201ENST00000256552 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
TRPM1-201ENST00000256552 OGFRQ9NZT2 677 aa12.24□□□□□ -0.45
TRPM1-201ENST00000256552 NINLQ9Y2I6 1382 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 CCDC73Q6ZRK6 1079 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 CNPY4Q8N129 248 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 INCENPQ9NQS7 918 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 ZKSCAN1P17029 563 aaPredicted RBP12.23□□□□□ -0.45
TRPM1-201ENST00000256552 MCM2P49736 904 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 MYCBPQ99417 103 aaPredicted RBP12.23□□□□□ -0.45
TRPM1-201ENST00000256552 RASSF4Q9H2L5 321 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
TRPM1-201ENST00000256552 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
TRPM1-201ENST00000256552 PES1O00541 588 aaKnown RBP12.22□□□□□ -0.45
TRPM1-201ENST00000256552 API5Q9BZZ5 524 aaKnown RBP12.22□□□□□ -0.45
TRPM1-201ENST00000256552 MIA2Q96PC5 1412 aa12.22□□□□□ -0.45
TRPM1-201ENST00000256552 RNF20Q5VTR2 975 aa12.22□□□□□ -0.45
TRPM1-201ENST00000256552 NOL10Q9BSC4 688 aaKnown RBP12.22□□□□□ -0.45
TRPM1-201ENST00000256552 NAT10Q9H0A0 1025 aaKnown RBP12.22□□□□□ -0.45
TRPM1-201ENST00000256552 STK26Q9P289 416 aa12.22□□□□□ -0.45
TRPM1-201ENST00000256552 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
TRPM1-201ENST00000256552 KANK1Q14678 1352 aa12.21□□□□□ -0.45
TRPM1-201ENST00000256552 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRPM1-201ENST00000256552 C8orf34Q49A92 452 aa12.21□□□□□ -0.45
TRPM1-201ENST00000256552 SMC2O95347 1197 aa12.21□□□□□ -0.45
TRPM1-201ENST00000256552 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.45
TRPM1-201ENST00000256552 CCDC91Q7Z6B0 441 aa12.21□□□□□ -0.45
TRPM1-201ENST00000256552 IGSF3O75054 1194 aa12.21□□□□□ -0.46
TRPM1-201ENST00000256552 RIPK4P57078 832 aa12.21□□□□□ -0.46
TRPM1-201ENST00000256552 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.46
TRPM1-201ENST00000256552 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.46
TRPM1-201ENST00000256552 CCP110O43303 1012 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 SECISBP2LQ93073 1101 aaKnown RBP12.2□□□□□ -0.46
TRPM1-201ENST00000256552 GOLGA6L7A0A1B0GV03 622 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 TXLNBQ8N3L3 684 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 DYDC1Q8WWB3 177 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
TRPM1-201ENST00000256552 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms