RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 TRMT2AQ8IZ69 625 aaKnown RBP14.73□□□□□ -0.05
VRTN-201ENST00000256362 IQGAP3Q86VI3 1631 aa14.73□□□□□ -0.05
VRTN-201ENST00000256362 CGNL1Q0VF96 1302 aa14.73□□□□□ -0.05
VRTN-201ENST00000256362 KANK1Q14678 1352 aa14.73□□□□□ -0.05
VRTN-201ENST00000256362 HSP90AB1P08238 724 aaKnown RBP14.73□□□□□ -0.05
VRTN-201ENST00000256362 PDZRN3Q9UPQ7 1066 aa14.73□□□□□ -0.05
VRTN-201ENST00000256362 CFAP65Q6ZU64 1925 aaKnown RBP14.73□□□□□ -0.05
VRTN-201ENST00000256362 ZCCHC11Q5TAX3 1644 aaKnown RBP14.73□□□□□ -0.05
VRTN-201ENST00000256362 FTSJ3Q8IY81 847 aaKnown RBP14.72□□□□□ -0.05
VRTN-201ENST00000256362 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 RARSP54136 660 aaKnown RBP14.72□□□□□ -0.05
VRTN-201ENST00000256362 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 PLXNC1O60486 1568 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 HSCBQ8IWL3 235 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 TBC1D2Q9BYX2 928 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 USP19O94966 1318 aa14.72□□□□□ -0.05
VRTN-201ENST00000256362 PLCH2O75038 1416 aa14.71□□□□□ -0.05
VRTN-201ENST00000256362 PIK3C2GO75747 1445 aa14.71□□□□□ -0.05
VRTN-201ENST00000256362 CABP2Q9NPB3 220 aa14.71□□□□□ -0.06
VRTN-201ENST00000256362 MCM4P33991 863 aa14.7□□□□□ -0.06
VRTN-201ENST00000256362 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
VRTN-201ENST00000256362 ESPNB1AK53 854 aa14.69□□□□□ -0.06
VRTN-201ENST00000256362 PODXL2Q9NZ53 605 aa14.69□□□□□ -0.06
VRTN-201ENST00000256362 RUNDC1Q96C34 613 aa14.69□□□□□ -0.06
VRTN-201ENST00000256362 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
VRTN-201ENST00000256362 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
VRTN-201ENST00000256362 ITPRIPQ8IWB1 547 aa14.68□□□□□ -0.06
VRTN-201ENST00000256362 GGNBP2Q9H3C7 697 aa14.68□□□□□ -0.06
VRTN-201ENST00000256362 SMC4Q9NTJ3 1288 aa14.68□□□□□ -0.06
VRTN-201ENST00000256362 CLTCL1P53675 1640 aa14.68□□□□□ -0.06
VRTN-201ENST00000256362 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
VRTN-201ENST00000256362 MSNP26038 577 aaKnown RBP14.67□□□□□ -0.06
VRTN-201ENST00000256362 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
VRTN-201ENST00000256362 INSRP06213 1382 aa14.67□□□□□ -0.06
VRTN-201ENST00000256362 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 UHRF1BP1LA0JNW5 1464 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 NOS1P29475 1434 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
VRTN-201ENST00000256362 FBLN1P23142 703 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 FOXD4L5Q5VV16 416 aaPredicted RBP14.66□□□□□ -0.06
VRTN-201ENST00000256362 MPNDQ8N594 471 aa14.66□□□□□ -0.06
VRTN-201ENST00000256362 FOXD4L4Q8WXT5 416 aaPredicted RBP14.66□□□□□ -0.06
VRTN-201ENST00000256362 KIAA1211Q6ZU35 1233 aa14.65□□□□□ -0.06
VRTN-201ENST00000256362 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
VRTN-201ENST00000256362 SYNMO15061 1565 aa14.65□□□□□ -0.06
VRTN-201ENST00000256362 ABCC1P33527 1531 aa14.65□□□□□ -0.06
VRTN-201ENST00000256362 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
VRTN-201ENST00000256362 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
VRTN-201ENST00000256362 LAMC1P11047 1609 aa14.64□□□□□ -0.07
VRTN-201ENST00000256362 EXOSC9Q06265 439 aaKnown RBP14.64□□□□□ -0.07
VRTN-201ENST00000256362 MRE11P49959 708 aa14.64□□□□□ -0.07
VRTN-201ENST00000256362 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
VRTN-201ENST00000256362 DNTTIP2Q5QJE6 756 aaKnown RBP14.64□□□□□ -0.07
VRTN-201ENST00000256362 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
VRTN-201ENST00000256362 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
VRTN-201ENST00000256362 RNF17Q9BXT8 1623 aaKnown RBP14.64□□□□□ -0.07
VRTN-201ENST00000256362 RWDD1Q9H446 243 aaPredicted RBP14.63□□□□□ -0.07
VRTN-201ENST00000256362 IQGAP1P46940 1657 aa14.63□□□□□ -0.07
VRTN-201ENST00000256362 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
VRTN-201ENST00000256362 CLCN1P35523 988 aa14.62□□□□□ -0.07
VRTN-201ENST00000256362 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
VRTN-201ENST00000256362 KDM5AP29375 1690 aaKnown RBP14.61□□□□□ -0.07
VRTN-201ENST00000256362 TRPM2O94759 1503 aa14.61□□□□□ -0.07
VRTN-201ENST00000256362 MYOM1P52179 1685 aa14.61□□□□□ -0.07
VRTN-201ENST00000256362 MINK1Q8N4C8 1332 aaPredicted RBP14.61□□□□□ -0.07
VRTN-201ENST00000256362 ZKSCAN2Q63HK3 967 aa14.6□□□□□ -0.07
VRTN-201ENST00000256362 FANCAO15360 1455 aa14.6□□□□□ -0.07
VRTN-201ENST00000256362 LNPKQ9C0E8 428 aa14.6□□□□□ -0.07
VRTN-201ENST00000256362 PTMAP06454 111 aaKnown RBP14.59□□□□□ -0.07
VRTN-201ENST00000256362 MVPQ14764 893 aaKnown RBP14.59□□□□□ -0.07
VRTN-201ENST00000256362 FOXD4L6Q3SYB3 417 aaPredicted RBP14.59□□□□□ -0.07
VRTN-201ENST00000256362 FOXD4L3Q6VB84 417 aaPredicted RBP14.59□□□□□ -0.07
VRTN-201ENST00000256362 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
VRTN-201ENST00000256362 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
VRTN-201ENST00000256362 SSH1Q8WYL5 1049 aa14.59□□□□□ -0.07
VRTN-201ENST00000256362 TBC1D32Q96NH3 1257 aa14.58□□□□□ -0.07
VRTN-201ENST00000256362 NOB1Q9ULX3 412 aaKnown RBP14.58□□□□□ -0.07
VRTN-201ENST00000256362 POLR3AO14802 1390 aaPredicted RBP14.58□□□□□ -0.08
VRTN-201ENST00000256362 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.08
VRTN-201ENST00000256362 TRIM27P14373 513 aa14.58□□□□□ -0.08
VRTN-201ENST00000256362 PTPRTO14522 1441 aa14.58□□□□□ -0.08
VRTN-201ENST00000256362 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.08
VRTN-201ENST00000256362 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
VRTN-201ENST00000256362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.57□□□□□ -0.08
VRTN-201ENST00000256362 THUMPD2Q9BTF0 503 aaKnown RBP14.57□□□□□ -0.08
VRTN-201ENST00000256362 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
VRTN-201ENST00000256362 APBB1O00213 710 aa14.57□□□□□ -0.08
VRTN-201ENST00000256362 PLCB2Q00722 1185 aa14.57□□□□□ -0.08
VRTN-201ENST00000256362 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
VRTN-201ENST00000256362 GBP4Q96PP9 640 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 RIPK4P57078 832 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 TMEM57Q8N5G2 664 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
VRTN-201ENST00000256362 ABCA6Q8N139 1617 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 WDR63Q8IWG1 891 aa14.56□□□□□ -0.08
VRTN-201ENST00000256362 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
VRTN-201ENST00000256362 STAC3Q96MF2 364 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms