RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
UBE4B-201ENST00000253251 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
UBE4B-201ENST00000253251 PLIN1O60240 522 aa18.63■□□□□ 0.57
UBE4B-201ENST00000253251 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 GBP4Q96PP9 640 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 SAMD9Q5K651 1589 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 NLRP2Q9NX02 1062 aa18.62■□□□□ 0.57
UBE4B-201ENST00000253251 C14orf93Q9H972 538 aaKnown RBP18.61■□□□□ 0.57
UBE4B-201ENST00000253251 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
UBE4B-201ENST00000253251 CDK11BP21127 795 aaKnown RBP18.61■□□□□ 0.57
UBE4B-201ENST00000253251 MFAP1P55081 439 aaKnown RBP18.61■□□□□ 0.57
UBE4B-201ENST00000253251 LRRFIP1Q32MZ4 808 aaKnown RBP18.6■□□□□ 0.57
UBE4B-201ENST00000253251 HSP90AB4PQ58FF6 505 aa18.6■□□□□ 0.57
UBE4B-201ENST00000253251 C9orf78Q9NZ63 289 aaPredicted RBP18.6■□□□□ 0.57
UBE4B-201ENST00000253251 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
UBE4B-201ENST00000253251 NUDT16Q96DE0 195 aaKnown RBP18.6■□□□□ 0.57
UBE4B-201ENST00000253251 ANKRD45Q5TZF3 282 aa18.6■□□□□ 0.57
UBE4B-201ENST00000253251 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
UBE4B-201ENST00000253251 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
UBE4B-201ENST00000253251 EIF2S2P20042 333 aaKnown RBP18.59■□□□□ 0.57
UBE4B-201ENST00000253251 FKBP5Q13451 457 aaPredicted RBP18.59■□□□□ 0.57
UBE4B-201ENST00000253251 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
UBE4B-201ENST00000253251 CHMP4CQ96CF2 233 aa18.59■□□□□ 0.57
UBE4B-201ENST00000253251 ADGRF5Q8IZF2 1346 aa18.58■□□□□ 0.57
UBE4B-201ENST00000253251 NOS1P29475 1434 aa18.58■□□□□ 0.56
UBE4B-201ENST00000253251 NSD2O96028 1365 aa18.58■□□□□ 0.56
UBE4B-201ENST00000253251 PTMAP06454 111 aaKnown RBP18.57■□□□□ 0.56
UBE4B-201ENST00000253251 IPO9Q96P70 1041 aaKnown RBP18.57■□□□□ 0.56
UBE4B-201ENST00000253251 FCHSD2O94868 740 aa18.57■□□□□ 0.56
UBE4B-201ENST00000253251 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
UBE4B-201ENST00000253251 ZNF428Q96B54 188 aa18.56■□□□□ 0.56
UBE4B-201ENST00000253251 ST18O60284 1047 aa18.56■□□□□ 0.56
UBE4B-201ENST00000253251 TRAPPC8Q9Y2L5 1435 aa18.56■□□□□ 0.56
UBE4B-201ENST00000253251 CCDC30Q5VVM6 783 aa18.55■□□□□ 0.56
UBE4B-201ENST00000253251 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
UBE4B-201ENST00000253251 TNRQ92752 1358 aa18.55■□□□□ 0.56
UBE4B-201ENST00000253251 NUTM2GQ5VZR2 741 aa18.55■□□□□ 0.56
UBE4B-201ENST00000253251 RALGAPBQ86X10 1494 aa18.55■□□□□ 0.56
UBE4B-201ENST00000253251 KCNH5Q8NCM2 988 aa18.54■□□□□ 0.56
UBE4B-201ENST00000253251 GOLGA6L6A8MZA4 724 aa18.54■□□□□ 0.56
UBE4B-201ENST00000253251 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
UBE4B-201ENST00000253251 RUFY2Q8WXA3 655 aa18.53■□□□□ 0.56
UBE4B-201ENST00000253251 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
UBE4B-201ENST00000253251 TATP17735 454 aaPredicted RBP18.53■□□□□ 0.56
UBE4B-201ENST00000253251 PDE4AP27815 886 aa18.53■□□□□ 0.56
UBE4B-201ENST00000253251 DNMT1P26358 1616 aaKnown RBP18.53■□□□□ 0.56
UBE4B-201ENST00000253251 L1TD1Q5T7N2 865 aaKnown RBP18.53■□□□□ 0.56
UBE4B-201ENST00000253251 ADGRL2O95490 1459 aa18.53■□□□□ 0.56
UBE4B-201ENST00000253251 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
UBE4B-201ENST00000253251 GNAI3P08754 354 aa18.51■□□□□ 0.55
UBE4B-201ENST00000253251 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
UBE4B-201ENST00000253251 NRDCO43847 1150 aa18.51■□□□□ 0.55
UBE4B-201ENST00000253251 REC8O95072 547 aa18.51■□□□□ 0.55
UBE4B-201ENST00000253251 MAPKBP1O60336 1514 aa18.51■□□□□ 0.55
UBE4B-201ENST00000253251 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
UBE4B-201ENST00000253251 SULT6B1Q6IMI4 303 aa18.51■□□□□ 0.55
UBE4B-201ENST00000253251 GNL2Q13823 731 aaKnown RBP18.5■□□□□ 0.55
UBE4B-201ENST00000253251 UHRF1BP1LA0JNW5 1464 aa18.49■□□□□ 0.55
UBE4B-201ENST00000253251 PUS7Q96PZ0 661 aaKnown RBP18.49■□□□□ 0.55
UBE4B-201ENST00000253251 G3BP1Q13283 466 aaKnown RBP eCLIP18.49■□□□□ 0.55
UBE4B-201ENST00000253251 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
UBE4B-201ENST00000253251 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
UBE4B-201ENST00000253251 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
UBE4B-201ENST00000253251 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
UBE4B-201ENST00000253251 ARHGEF12Q9NZN5 1544 aa18.48■□□□□ 0.55
UBE4B-201ENST00000253251 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
UBE4B-201ENST00000253251 MEX3CQ5U5Q3 659 aaKnown RBP18.48■□□□□ 0.55
UBE4B-201ENST00000253251 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
UBE4B-201ENST00000253251 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
UBE4B-201ENST00000253251 HSP90B1P14625 803 aaKnown RBP18.47■□□□□ 0.55
UBE4B-201ENST00000253251 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
UBE4B-201ENST00000253251 IFIT2P09913 472 aaKnown RBP18.47■□□□□ 0.55
UBE4B-201ENST00000253251 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
UBE4B-201ENST00000253251 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
UBE4B-201ENST00000253251 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
UBE4B-201ENST00000253251 RIC3Q7Z5B4 369 aa18.46■□□□□ 0.55
UBE4B-201ENST00000253251 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
UBE4B-201ENST00000253251 RILPL2Q969X0 211 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 SPRYD3Q8NCJ5 442 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 G3V3G9 751 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 FRAT2O75474 233 aaPredicted RBP18.45■□□□□ 0.54
UBE4B-201ENST00000253251 DCAF8Q5TAQ9 597 aa18.45■□□□□ 0.54
UBE4B-201ENST00000253251 ERC2O15083 957 aa18.44■□□□□ 0.54
UBE4B-201ENST00000253251 NECTIN2Q92692 538 aa18.44■□□□□ 0.54
UBE4B-201ENST00000253251 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
UBE4B-201ENST00000253251 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
UBE4B-201ENST00000253251 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
UBE4B-201ENST00000253251 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
UBE4B-201ENST00000253251 CCDC34Q96HJ3 373 aa18.43■□□□□ 0.54
UBE4B-201ENST00000253251 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
UBE4B-201ENST00000253251 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
UBE4B-201ENST00000253251 TPRNQ4KMQ1 711 aa18.42■□□□□ 0.54
UBE4B-201ENST00000253251 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
UBE4B-201ENST00000253251 CCT4P50991 539 aaKnown RBP18.41■□□□□ 0.54
UBE4B-201ENST00000253251 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms